Protein–RNA interactions for Protein: Q96NT5

SLC46A1, Proton-coupled folate transporter, humanhuman

Predictions only

Length 459 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A1Q96NT5 AC026185.1-201ENST00000445748 174 ntBASIC21.03■□□□□ 0.96
SLC46A1Q96NT5 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC21.03■□□□□ 0.96
SLC46A1Q96NT5 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC21.03■□□□□ 0.96
SLC46A1Q96NT5 AP001160.5-201ENST00000636508 485 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
SLC46A1Q96NT5 PARP9-207ENST00000492382 1837 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
SLC46A1Q96NT5 CYP2A13-201ENST00000330436 1739 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
SLC46A1Q96NT5 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC46A1Q96NT5 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SLC46A1Q96NT5 PCOLCE2-201ENST00000295992 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC46A1Q96NT5 RARA-203ENST00000394086 2008 ntTSL 2 BASIC21.02■□□□□ 0.96
SLC46A1Q96NT5 NT5C-201ENST00000245552 954 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC46A1Q96NT5 NXT1-201ENST00000254998 1123 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC46A1Q96NT5 SMCO4-201ENST00000298966 1104 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC46A1Q96NT5 COX20-201ENST00000366528 568 ntTSL 2 BASIC21.02■□□□□ 0.96
SLC46A1Q96NT5 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
SLC46A1Q96NT5 YIF1A-205ENST00000471387 854 ntTSL 5 BASIC21.02■□□□□ 0.96
SLC46A1Q96NT5 AC092468.1-201ENST00000491321 562 ntTSL 4 BASIC21.02■□□□□ 0.96
SLC46A1Q96NT5 DBI-210ENST00000542275 757 ntTSL 5 BASIC21.02■□□□□ 0.96
SLC46A1Q96NT5 EMC9-206ENST00000560403 872 ntTSL 2 BASIC21.02■□□□□ 0.96
SLC46A1Q96NT5 KCTD15-207ENST00000589786 1625 ntAPPRIS P1 TSL 2 BASIC21.02■□□□□ 0.96
SLC46A1Q96NT5 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC46A1Q96NT5 TTC39A-203ENST00000371747 1876 ntTSL 2 BASIC21.02■□□□□ 0.96
SLC46A1Q96NT5 USF3-203ENST00000491165 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC21.02■□□□□ 0.96
SLC46A1Q96NT5 AP004607.4-201ENST00000530158 1459 ntBASIC21.01■□□□□ 0.95
SLC46A1Q96NT5 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC46A1Q96NT5 TMED4-205ENST00000481238 1755 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SLC46A1Q96NT5 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC46A1Q96NT5 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC21.01■□□□□ 0.95
SLC46A1Q96NT5 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC21.01■□□□□ 0.95
SLC46A1Q96NT5 RPS15-210ENST00000592623 873 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
SLC46A1Q96NT5 NECTIN2-202ENST00000252485 2112 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC46A1Q96NT5 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC21.01■□□□□ 0.95
SLC46A1Q96NT5 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
SLC46A1Q96NT5 DHH-201ENST00000266991 1936 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC46A1Q96NT5 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
SLC46A1Q96NT5 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC46A1Q96NT5 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC46A1Q96NT5 URAD-201ENST00000332715 931 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
SLC46A1Q96NT5 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC21■□□□□ 0.95
SLC46A1Q96NT5 MT1M-201ENST00000379818 829 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC46A1Q96NT5 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC21■□□□□ 0.95
SLC46A1Q96NT5 POLE4-205ENST00000483063 1248 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC46A1Q96NT5 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC21■□□□□ 0.95
SLC46A1Q96NT5 IDH2-203ENST00000559482 1278 ntTSL 5 BASIC21■□□□□ 0.95
SLC46A1Q96NT5 LINC02091-201ENST00000576171 1185 ntTSL 5 BASIC21■□□□□ 0.95
SLC46A1Q96NT5 FIZ1-205ENST00000592585 489 ntTSL 5 BASIC21■□□□□ 0.95
SLC46A1Q96NT5 SLC35A2-211ENST00000634461 533 ntTSL 4 BASIC21■□□□□ 0.95
SLC46A1Q96NT5 ID4-201ENST00000378700 2344 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC46A1Q96NT5 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC21■□□□□ 0.95
SLC46A1Q96NT5 AK8-201ENST00000298545 2072 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
SLC46A1Q96NT5 SNX18-201ENST00000326277 2063 ntTSL 2 BASIC21■□□□□ 0.95
SLC46A1Q96NT5 LSR-201ENST00000347609 1880 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC46A1Q96NT5 LSR-213ENST00000605618 1885 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC46A1Q96NT5 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC46A1Q96NT5 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SLC46A1Q96NT5 SLC25A29-201ENST00000359232 2385 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC46A1Q96NT5 PCSK1N-201ENST00000218230 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC46A1Q96NT5 PPP1R14BP3-201ENST00000509033 445 ntBASIC20.99■□□□□ 0.95
SLC46A1Q96NT5 SEPT4-215ENST00000580809 952 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SLC46A1Q96NT5 BID-214ENST00000617586 542 ntTSL 5 BASIC20.99■□□□□ 0.95
SLC46A1Q96NT5 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC20.99■□□□□ 0.95
SLC46A1Q96NT5 ACAA1-219ENST00000625927 1760 ntTSL 5 BASIC20.99■□□□□ 0.95
SLC46A1Q96NT5 MCUB-201ENST00000394650 2278 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC46A1Q96NT5 VSTM4-201ENST00000298454 2170 ntAPPRIS P3 TSL 2 BASIC20.99■□□□□ 0.95
SLC46A1Q96NT5 AP002761.3-201ENST00000546324 1695 ntTSL 2 BASIC20.99■□□□□ 0.95
SLC46A1Q96NT5 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
SLC46A1Q96NT5 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC20.99■□□□□ 0.95
SLC46A1Q96NT5 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC20.99■□□□□ 0.95
SLC46A1Q96NT5 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
SLC46A1Q96NT5 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC46A1Q96NT5 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC46A1Q96NT5 MID1IP1-203ENST00000457894 1902 ntAPPRIS P1 TSL 3 BASIC20.98■□□□□ 0.95
SLC46A1Q96NT5 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SLC46A1Q96NT5 ORMDL1-202ENST00000392349 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
SLC46A1Q96NT5 MAP2K4P1-201ENST00000438453 1195 ntBASIC20.98■□□□□ 0.95
SLC46A1Q96NT5 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC20.98■□□□□ 0.95
SLC46A1Q96NT5 LINC01901-201ENST00000585822 1115 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SLC46A1Q96NT5 AC104771.1-201ENST00000603335 964 ntBASIC20.98■□□□□ 0.95
SLC46A1Q96NT5 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
SLC46A1Q96NT5 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.97■□□□□ 0.95
SLC46A1Q96NT5 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC20.97■□□□□ 0.95
SLC46A1Q96NT5 AC004854.2-201ENST00000608450 1441 ntBASIC20.97■□□□□ 0.95
SLC46A1Q96NT5 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
SLC46A1Q96NT5 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC46A1Q96NT5 AC092171.1-201ENST00000455866 753 ntTSL 2 BASIC20.97■□□□□ 0.95
SLC46A1Q96NT5 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SLC46A1Q96NT5 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
SLC46A1Q96NT5 NIPSNAP2-201ENST00000322090 1999 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
SLC46A1Q96NT5 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLC46A1Q96NT5 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
SLC46A1Q96NT5 CAMK2N1-201ENST00000375078 2336 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLC46A1Q96NT5 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SLC46A1Q96NT5 MBOAT7-205ENST00000431666 2471 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
SLC46A1Q96NT5 GALNT12-201ENST00000375011 2735 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLC46A1Q96NT5 THRA-202ENST00000394121 2260 ntTSL 2 BASIC20.96■□□□□ 0.95
SLC46A1Q96NT5 BX005040.4-201ENST00000637145 1518 ntBASIC20.96■□□□□ 0.95
SLC46A1Q96NT5 HSD17B14-201ENST00000263278 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
SLC46A1Q96NT5 AL691442.1-201ENST00000505139 1042 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
SLC46A1Q96NT5 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC20.96■□□□□ 0.95
SLC46A1Q96NT5 SEPT4-205ENST00000426861 1906 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms