Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 UQCR11-202ENST00000589880 504 ntAPPRIS P1 TSL 3 BASIC22.67■■□□□ 1.22
PCDH19Q8TAB3 RALB-208ENST00000631312 311 ntTSL 5 BASIC22.67■■□□□ 1.22
PCDH19Q8TAB3 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDH19Q8TAB3 NHLRC4-202ENST00000540585 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDH19Q8TAB3 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
PCDH19Q8TAB3 ABHD16B-201ENST00000369916 1491 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
PCDH19Q8TAB3 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDH19Q8TAB3 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDH19Q8TAB3 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDH19Q8TAB3 TOLLIP-208ENST00000527938 549 ntTSL 4 BASIC22.66■■□□□ 1.22
PCDH19Q8TAB3 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDH19Q8TAB3 PHLDB3-207ENST00000599242 2286 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
PCDH19Q8TAB3 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC22.66■■□□□ 1.22
PCDH19Q8TAB3 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
PCDH19Q8TAB3 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC22.65■■□□□ 1.22
PCDH19Q8TAB3 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC22.65■■□□□ 1.22
PCDH19Q8TAB3 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDH19Q8TAB3 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
PCDH19Q8TAB3 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDH19Q8TAB3 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PCDH19Q8TAB3 PCGF3-202ENST00000400151 1175 ntTSL 2 BASIC22.65■■□□□ 1.22
PCDH19Q8TAB3 AC092171.4-201ENST00000609130 632 ntBASIC22.65■■□□□ 1.22
PCDH19Q8TAB3 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
PCDH19Q8TAB3 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
PCDH19Q8TAB3 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDH19Q8TAB3 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC22.65■■□□□ 1.22
PCDH19Q8TAB3 UBALD1-201ENST00000283474 1413 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDH19Q8TAB3 NIPA2-205ENST00000539711 1412 ntTSL 2 BASIC22.65■■□□□ 1.22
PCDH19Q8TAB3 AC137767.1-201ENST00000602918 1920 ntBASIC22.65■■□□□ 1.22
PCDH19Q8TAB3 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
PCDH19Q8TAB3 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC22.64■■□□□ 1.22
PCDH19Q8TAB3 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
PCDH19Q8TAB3 P4HTM-201ENST00000343546 2268 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
PCDH19Q8TAB3 ANKHD1-204ENST00000394722 2035 ntTSL 1 (best) BASIC22.64■■□□□ 1.22
PCDH19Q8TAB3 DBP-201ENST00000222122 2229 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PCDH19Q8TAB3 CARD19-201ENST00000375464 855 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PCDH19Q8TAB3 FAM66C-205ENST00000456135 1216 ntTSL 5 BASIC22.64■■□□□ 1.21
PCDH19Q8TAB3 KRTAP5-4-202ENST00000616115 660 ntAPPRIS ALT2 TSL 5 BASIC22.64■■□□□ 1.21
PCDH19Q8TAB3 AC110285.6-201ENST00000617652 491 ntBASIC22.64■■□□□ 1.21
PCDH19Q8TAB3 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC22.64■■□□□ 1.21
PCDH19Q8TAB3 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
PCDH19Q8TAB3 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PCDH19Q8TAB3 CCM2-206ENST00000474617 1532 ntTSL 5 BASIC22.63■■□□□ 1.21
PCDH19Q8TAB3 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDH19Q8TAB3 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PCDH19Q8TAB3 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDH19Q8TAB3 GNB2-201ENST00000303210 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDH19Q8TAB3 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDH19Q8TAB3 SERBP1P1-201ENST00000396021 1160 ntBASIC22.63■■□□□ 1.21
PCDH19Q8TAB3 PTCHD3P2-201ENST00000424937 1205 ntBASIC22.63■■□□□ 1.21
PCDH19Q8TAB3 AC096631.2-201ENST00000436136 790 ntBASIC22.63■■□□□ 1.21
PCDH19Q8TAB3 VAMP2-204ENST00000488857 874 ntAPPRIS ALT1 TSL 3 BASIC22.63■■□□□ 1.21
PCDH19Q8TAB3 CA15P2-201ENST00000611168 834 ntBASIC22.63■■□□□ 1.21
PCDH19Q8TAB3 ACTL10-201ENST00000330271 2028 ntAPPRIS P1 BASIC22.63■■□□□ 1.21
PCDH19Q8TAB3 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDH19Q8TAB3 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC22.63■■□□□ 1.21
PCDH19Q8TAB3 FAM185A-201ENST00000409231 1446 ntAPPRIS ALT2 TSL 2 BASIC22.63■■□□□ 1.21
PCDH19Q8TAB3 GPR143-203ENST00000467482 1762 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDH19Q8TAB3 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC22.63■■□□□ 1.21
PCDH19Q8TAB3 TLX2-201ENST00000233638 2136 ntAPPRIS P1 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDH19Q8TAB3 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC22.63■■□□□ 1.21
PCDH19Q8TAB3 KREMEN2-203ENST00000571007 1877 ntTSL 2 BASIC22.62■■□□□ 1.21
PCDH19Q8TAB3 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDH19Q8TAB3 STX4-202ENST00000394998 1498 ntTSL 2 BASIC22.62■■□□□ 1.21
PCDH19Q8TAB3 MYD88-205ENST00000424893 1279 ntAPPRIS ALT2 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDH19Q8TAB3 YJEFN3-201ENST00000436027 878 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDH19Q8TAB3 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC22.62■■□□□ 1.21
PCDH19Q8TAB3 CHTF8-208ENST00000522091 863 ntTSL 2 BASIC22.62■■□□□ 1.21
PCDH19Q8TAB3 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC22.62■■□□□ 1.21
PCDH19Q8TAB3 USP21-202ENST00000368001 2095 ntTSL 1 (best) BASIC22.62■■□□□ 1.21
PCDH19Q8TAB3 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC22.62■■□□□ 1.21
PCDH19Q8TAB3 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC22.62■■□□□ 1.21
PCDH19Q8TAB3 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDH19Q8TAB3 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC22.62■■□□□ 1.21
PCDH19Q8TAB3 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC22.62■■□□□ 1.21
PCDH19Q8TAB3 PDLIM2-216ENST00000464275 1995 ntTSL 2 BASIC22.61■■□□□ 1.21
PCDH19Q8TAB3 NIPA2-203ENST00000398013 2280 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDH19Q8TAB3 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PCDH19Q8TAB3 WISP2-203ENST00000372868 1600 ntAPPRIS P1 TSL 3 BASIC22.61■■□□□ 1.21
PCDH19Q8TAB3 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC22.61■■□□□ 1.21
PCDH19Q8TAB3 CDK5-204ENST00000485972 1758 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDH19Q8TAB3 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC22.61■■□□□ 1.21
PCDH19Q8TAB3 ZNF568-208ENST00000586353 1902 ntTSL 1 (best) BASIC22.61■■□□□ 1.21
PCDH19Q8TAB3 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDH19Q8TAB3 PRICKLE4-201ENST00000394259 939 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
PCDH19Q8TAB3 KRTAP5-4-201ENST00000399682 1181 ntAPPRIS P5 BASIC22.61■■□□□ 1.21
PCDH19Q8TAB3 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC22.61■■□□□ 1.21
PCDH19Q8TAB3 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDH19Q8TAB3 AC096887.1-203ENST00000607203 768 ntAPPRIS ALT2 TSL 5 BASIC22.61■■□□□ 1.21
PCDH19Q8TAB3 AL031602.1-201ENST00000633169 911 ntBASIC22.61■■□□□ 1.21
PCDH19Q8TAB3 SYT6-210ENST00000641643 1587 ntBASIC22.61■■□□□ 1.21
PCDH19Q8TAB3 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDH19Q8TAB3 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC22.61■■□□□ 1.21
PCDH19Q8TAB3 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC22.6■■□□□ 1.21
PCDH19Q8TAB3 CCDC166-201ENST00000542437 1320 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
PCDH19Q8TAB3 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC22.6■■□□□ 1.21
PCDH19Q8TAB3 TRH-201ENST00000302649 1978 ntAPPRIS P2 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDH19Q8TAB3 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC22.6■■□□□ 1.21
PCDH19Q8TAB3 EEFSEC-201ENST00000254730 2232 ntAPPRIS P1 TSL 1 (best) BASIC22.6■■□□□ 1.21
PCDH19Q8TAB3 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC22.6■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms