Protein–RNA interactions for Protein: Q8N9A8

CNEP1R1, Nuclear envelope phosphatase-regulatory subunit 1, humanhuman

Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1Q8N9A8 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNEP1R1Q8N9A8 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNEP1R1Q8N9A8 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
CNEP1R1Q8N9A8 BAZ1A-201ENST00000358716 5920 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CNEP1R1Q8N9A8 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CNEP1R1Q8N9A8 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC19.44■□□□□ 0.7
CNEP1R1Q8N9A8 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNEP1R1Q8N9A8 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNEP1R1Q8N9A8 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC19.44■□□□□ 0.7
CNEP1R1Q8N9A8 JARID2-AS1-201ENST00000441978 455 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CNEP1R1Q8N9A8 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC19.44■□□□□ 0.7
CNEP1R1Q8N9A8 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC19.44■□□□□ 0.7
CNEP1R1Q8N9A8 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC19.44■□□□□ 0.7
CNEP1R1Q8N9A8 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.44■□□□□ 0.7
CNEP1R1Q8N9A8 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNEP1R1Q8N9A8 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC19.44■□□□□ 0.7
CNEP1R1Q8N9A8 MPST-204ENST00000404393 1329 ntTSL 5 BASIC19.44■□□□□ 0.7
CNEP1R1Q8N9A8 CDC16-203ENST00000356221 2203 ntAPPRIS P3 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNEP1R1Q8N9A8 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNEP1R1Q8N9A8 RABGGTA-202ENST00000399409 2265 ntAPPRIS P1 TSL 1 (best) BASIC19.44■□□□□ 0.7
CNEP1R1Q8N9A8 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNEP1R1Q8N9A8 TMSB15B-202ENST00000436583 2186 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNEP1R1Q8N9A8 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CNEP1R1Q8N9A8 TBR1-202ENST00000410035 1454 ntTSL 2 BASIC19.43■□□□□ 0.7
CNEP1R1Q8N9A8 CKMT1B-207ENST00000441322 1747 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNEP1R1Q8N9A8 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
CNEP1R1Q8N9A8 AC093323.1-202ENST00000635031 2045 ntBASIC19.43■□□□□ 0.7
CNEP1R1Q8N9A8 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC19.43■□□□□ 0.7
CNEP1R1Q8N9A8 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CNEP1R1Q8N9A8 NT5C3AP1-201ENST00000394500 1012 ntBASIC19.43■□□□□ 0.7
CNEP1R1Q8N9A8 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC19.43■□□□□ 0.7
CNEP1R1Q8N9A8 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
CNEP1R1Q8N9A8 AC034268.1-201ENST00000441047 882 ntBASIC19.43■□□□□ 0.7
CNEP1R1Q8N9A8 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC19.43■□□□□ 0.7
CNEP1R1Q8N9A8 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNEP1R1Q8N9A8 DENND2D-202ENST00000369752 1894 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
CNEP1R1Q8N9A8 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.43■□□□□ 0.7
CNEP1R1Q8N9A8 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
CNEP1R1Q8N9A8 PTH1R-207ENST00000449590 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNEP1R1Q8N9A8 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
CNEP1R1Q8N9A8 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC19.42■□□□□ 0.7
CNEP1R1Q8N9A8 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC19.42■□□□□ 0.7
CNEP1R1Q8N9A8 FAM219A-202ENST00000379078 770 ntTSL 3 BASIC19.42■□□□□ 0.7
CNEP1R1Q8N9A8 FAM219A-205ENST00000379084 893 ntTSL 5 BASIC19.42■□□□□ 0.7
CNEP1R1Q8N9A8 CDKN2AIPNL-201ENST00000395009 800 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CNEP1R1Q8N9A8 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CNEP1R1Q8N9A8 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC19.42■□□□□ 0.7
CNEP1R1Q8N9A8 RAB43-208ENST00000615093 783 ntTSL 5 BASIC19.42■□□□□ 0.7
CNEP1R1Q8N9A8 AL031602.1-201ENST00000633169 911 ntBASIC19.42■□□□□ 0.7
CNEP1R1Q8N9A8 RAB24-201ENST00000303251 1311 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNEP1R1Q8N9A8 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNEP1R1Q8N9A8 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNEP1R1Q8N9A8 MFSD7-201ENST00000322224 2123 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNEP1R1Q8N9A8 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
CNEP1R1Q8N9A8 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
CNEP1R1Q8N9A8 CLN3-207ENST00000395653 1430 ntTSL 5 BASIC19.42■□□□□ 0.7
CNEP1R1Q8N9A8 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.41■□□□□ 0.7
CNEP1R1Q8N9A8 ARSB-202ENST00000396151 2316 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CNEP1R1Q8N9A8 TSKU-201ENST00000333090 2712 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNEP1R1Q8N9A8 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNEP1R1Q8N9A8 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CNEP1R1Q8N9A8 MFSD14C-201ENST00000375223 619 ntAPPRIS ALT2 TSL 5 BASIC19.41■□□□□ 0.7
CNEP1R1Q8N9A8 AC123595.1-201ENST00000440769 1046 ntBASIC19.41■□□□□ 0.7
CNEP1R1Q8N9A8 AC010141.3-201ENST00000456659 717 ntBASIC19.41■□□□□ 0.7
CNEP1R1Q8N9A8 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
CNEP1R1Q8N9A8 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
CNEP1R1Q8N9A8 POLR2E-214ENST00000619917 932 ntTSL 5 BASIC19.41■□□□□ 0.7
CNEP1R1Q8N9A8 PTP4A3-204ENST00000521578 1717 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
CNEP1R1Q8N9A8 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC19.41■□□□□ 0.7
CNEP1R1Q8N9A8 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC19.41■□□□□ 0.7
CNEP1R1Q8N9A8 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNEP1R1Q8N9A8 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNEP1R1Q8N9A8 LINC01678-201ENST00000411694 863 ntTSL 5 BASIC19.4■□□□□ 0.7
CNEP1R1Q8N9A8 SPOCK2-203ENST00000412663 1284 ntTSL 5 BASIC19.4■□□□□ 0.7
CNEP1R1Q8N9A8 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC19.4■□□□□ 0.7
CNEP1R1Q8N9A8 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC19.4■□□□□ 0.7
CNEP1R1Q8N9A8 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC19.4■□□□□ 0.7
CNEP1R1Q8N9A8 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNEP1R1Q8N9A8 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNEP1R1Q8N9A8 FRS3-202ENST00000373018 2174 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
CNEP1R1Q8N9A8 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CNEP1R1Q8N9A8 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNEP1R1Q8N9A8 EPCAM-202ENST00000405271 1530 ntTSL 5 BASIC19.4■□□□□ 0.7
CNEP1R1Q8N9A8 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CNEP1R1Q8N9A8 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC19.39■□□□□ 0.7
CNEP1R1Q8N9A8 NKX2-3-202ENST00000622383 1986 ntTSL 5 BASIC19.39■□□□□ 0.7
CNEP1R1Q8N9A8 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CNEP1R1Q8N9A8 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC19.39■□□□□ 0.69
CNEP1R1Q8N9A8 PRR25-201ENST00000301698 1209 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNEP1R1Q8N9A8 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.39■□□□□ 0.69
CNEP1R1Q8N9A8 EIF6-203ENST00000374450 1289 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNEP1R1Q8N9A8 MFF-208ENST00000409616 1247 ntTSL 5 BASIC19.39■□□□□ 0.69
CNEP1R1Q8N9A8 GLI3-203ENST00000437480 451 ntTSL 2 BASIC19.39■□□□□ 0.69
CNEP1R1Q8N9A8 LINC01942-201ENST00000521373 513 ntTSL 4 BASIC19.39■□□□□ 0.69
CNEP1R1Q8N9A8 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CNEP1R1Q8N9A8 RPLP2-207ENST00000530797 637 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CNEP1R1Q8N9A8 AL583722.4-201ENST00000555524 716 ntTSL 3 BASIC19.39■□□□□ 0.69
CNEP1R1Q8N9A8 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
CNEP1R1Q8N9A8 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC19.39■□□□□ 0.69
CNEP1R1Q8N9A8 AC009506.1-201ENST00000418474 1494 ntTSL 2 BASIC19.39■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms