Protein–RNA interactions for Protein: Q52M75

LINC01554, Putative uncharacterized protein encoded by LINC01554, humanhuman

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01554Q52M75 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
LINC01554Q52M75 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01554Q52M75 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01554Q52M75 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC10.95□□□□□ -0.66
LINC01554Q52M75 GSR-205ENST00000541648 1410 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01554Q52M75 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC10.95□□□□□ -0.66
LINC01554Q52M75 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
LINC01554Q52M75 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
LINC01554Q52M75 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01554Q52M75 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC10.95□□□□□ -0.66
LINC01554Q52M75 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01554Q52M75 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC10.95□□□□□ -0.66
LINC01554Q52M75 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01554Q52M75 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC10.95□□□□□ -0.66
LINC01554Q52M75 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC10.95□□□□□ -0.66
LINC01554Q52M75 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
LINC01554Q52M75 PORCN-202ENST00000355961 1848 ntAPPRIS ALT1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01554Q52M75 RINL-208ENST00000598904 1846 ntAPPRIS P3 TSL 5 BASIC10.95□□□□□ -0.66
LINC01554Q52M75 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01554Q52M75 FZD4-201ENST00000531380 7383 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01554Q52M75 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01554Q52M75 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC10.95□□□□□ -0.66
LINC01554Q52M75 LENG8-202ENST00000376514 5146 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
LINC01554Q52M75 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC10.95□□□□□ -0.66
LINC01554Q52M75 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
LINC01554Q52M75 KIF5C-201ENST00000435030 6931 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
LINC01554Q52M75 PPAN-202ENST00000393793 1575 ntTSL 5 BASIC10.94□□□□□ -0.66
LINC01554Q52M75 RAB40B-201ENST00000269347 2189 ntTSL 2 BASIC10.94□□□□□ -0.66
LINC01554Q52M75 TBL2-222ENST00000610724 2165 ntTSL 5 BASIC10.94□□□□□ -0.66
LINC01554Q52M75 ARPC2-202ENST00000315717 1505 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01554Q52M75 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01554Q52M75 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01554Q52M75 KRT72-201ENST00000293745 2015 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01554Q52M75 APBB3-204ENST00000358580 2020 ntTSL 5 BASIC10.94□□□□□ -0.66
LINC01554Q52M75 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC10.94□□□□□ -0.66
LINC01554Q52M75 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01554Q52M75 VSTM2L-202ENST00000373461 1959 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01554Q52M75 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01554Q52M75 PTDSS2-201ENST00000308020 2445 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01554Q52M75 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01554Q52M75 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01554Q52M75 AC087741.3-201ENST00000624270 1347 ntBASIC10.94□□□□□ -0.66
LINC01554Q52M75 GPR25-201ENST00000304244 1224 ntAPPRIS P1 BASIC10.94□□□□□ -0.66
LINC01554Q52M75 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC10.94□□□□□ -0.66
LINC01554Q52M75 DUX4L29-201ENST00000425409 679 ntBASIC10.94□□□□□ -0.66
LINC01554Q52M75 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01554Q52M75 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC10.94□□□□□ -0.66
LINC01554Q52M75 NRM-201ENST00000259953 1755 ntAPPRIS P2 TSL 2 BASIC10.94□□□□□ -0.66
LINC01554Q52M75 PDLIM2-202ENST00000308354 2236 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01554Q52M75 PDLIM2-203ENST00000339162 2226 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01554Q52M75 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
LINC01554Q52M75 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC10.94□□□□□ -0.66
LINC01554Q52M75 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC10.94□□□□□ -0.66
LINC01554Q52M75 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01554Q52M75 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01554Q52M75 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01554Q52M75 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01554Q52M75 LINC01124-201ENST00000409786 2117 ntBASIC10.94□□□□□ -0.66
LINC01554Q52M75 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01554Q52M75 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01554Q52M75 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01554Q52M75 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC10.94□□□□□ -0.66
LINC01554Q52M75 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC10.93□□□□□ -0.66
LINC01554Q52M75 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01554Q52M75 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01554Q52M75 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01554Q52M75 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01554Q52M75 KDM4C-203ENST00000401787 1406 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01554Q52M75 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01554Q52M75 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01554Q52M75 KCTD8-201ENST00000360029 2587 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01554Q52M75 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01554Q52M75 MON2-203ENST00000546600 6130 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01554Q52M75 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01554Q52M75 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
LINC01554Q52M75 PEX26-202ENST00000399744 1672 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01554Q52M75 JMJD1C-202ENST00000399262 8666 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
LINC01554Q52M75 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC10.93□□□□□ -0.66
LINC01554Q52M75 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01554Q52M75 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC10.93□□□□□ -0.66
LINC01554Q52M75 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC10.93□□□□□ -0.66
LINC01554Q52M75 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01554Q52M75 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01554Q52M75 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC10.93□□□□□ -0.66
LINC01554Q52M75 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01554Q52M75 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01554Q52M75 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01554Q52M75 ST7L-206ENST00000369666 1815 ntTSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01554Q52M75 CCND3-205ENST00000415497 1843 ntTSL 2 BASIC10.93□□□□□ -0.66
LINC01554Q52M75 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC10.93□□□□□ -0.66
LINC01554Q52M75 SSBP4-201ENST00000270061 1768 ntAPPRIS P3 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01554Q52M75 MAU2-201ENST00000262815 4994 ntAPPRIS P1 TSL 1 (best) BASIC10.93□□□□□ -0.66
LINC01554Q52M75 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC10.93□□□□□ -0.66
LINC01554Q52M75 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01554Q52M75 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01554Q52M75 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01554Q52M75 FOXJ1-201ENST00000322957 2641 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01554Q52M75 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC10.92□□□□□ -0.66
LINC01554Q52M75 AC010501.1-201ENST00000606270 1962 ntBASIC10.92□□□□□ -0.66
LINC01554Q52M75 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC10.92□□□□□ -0.66
Retrieved 100 of 98,524 protein–RNA pairs in 35 ms