Protein–RNA interactions for Protein: Q07092

COL16A1, Collagen alpha-1(XVI) chain, humanhuman

Predicted RBP Predictions only

Length 1,604 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1Q07092 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC30.17■■■□□ 2.42
COL16A1Q07092 BICDL2-203ENST00000572449 1984 ntAPPRIS P1 TSL 5 BASIC30.17■■■□□ 2.42
COL16A1Q07092 MVB12A-212ENST00000543795 1154 ntAPPRIS P1 TSL 5 BASIC30.17■■■□□ 2.42
COL16A1Q07092 IRX5-204ENST00000560154 879 ntTSL 5 BASIC30.17■■■□□ 2.42
COL16A1Q07092 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
COL16A1Q07092 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC30.17■■■□□ 2.42
COL16A1Q07092 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC30.16■■■□□ 2.42
COL16A1Q07092 PORCN-203ENST00000359882 1877 ntAPPRIS ALT1 TSL 5 BASIC30.16■■■□□ 2.42
COL16A1Q07092 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC30.16■■■□□ 2.42
COL16A1Q07092 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC30.16■■■□□ 2.42
COL16A1Q07092 AC008443.6-201ENST00000512508 500 ntTSL 4 BASIC30.16■■■□□ 2.42
COL16A1Q07092 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
COL16A1Q07092 SH3GLB2-202ENST00000372559 1365 ntAPPRIS P1 TSL 1 (best) BASIC30.16■■■□□ 2.42
COL16A1Q07092 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC30.16■■■□□ 2.42
COL16A1Q07092 ANTXR2-202ENST00000346652 1343 ntTSL 1 (best) BASIC30.16■■■□□ 2.42
COL16A1Q07092 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
COL16A1Q07092 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC30.15■■■□□ 2.42
COL16A1Q07092 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC30.15■■■□□ 2.42
COL16A1Q07092 ALKBH6-212ENST00000485128 959 ntTSL 5 BASIC30.15■■■□□ 2.42
COL16A1Q07092 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC30.15■■■□□ 2.42
COL16A1Q07092 TMEM125-202ENST00000439858 1786 ntAPPRIS P1 TSL 2 BASIC30.15■■■□□ 2.42
COL16A1Q07092 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
COL16A1Q07092 COX5B-201ENST00000258424 712 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.42
COL16A1Q07092 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC30.14■■■□□ 2.42
COL16A1Q07092 RPS2P4-201ENST00000476944 856 ntBASIC30.14■■■□□ 2.42
COL16A1Q07092 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC30.14■■■□□ 2.42
COL16A1Q07092 TMEM51-205ENST00000434578 1861 ntTSL 1 (best) BASIC30.14■■■□□ 2.42
COL16A1Q07092 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC30.14■■■□□ 2.41
COL16A1Q07092 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC30.14■■■□□ 2.41
COL16A1Q07092 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC30.14■■■□□ 2.41
COL16A1Q07092 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC30.14■■■□□ 2.41
COL16A1Q07092 AC092803.2-201ENST00000564287 1899 ntBASIC30.13■■■□□ 2.41
COL16A1Q07092 SCAND1-202ENST00000373991 1727 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
COL16A1Q07092 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
COL16A1Q07092 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
COL16A1Q07092 PPP1CA-202ENST00000358239 1054 ntTSL 2 BASIC30.13■■■□□ 2.41
COL16A1Q07092 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC30.13■■■□□ 2.41
COL16A1Q07092 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC30.13■■■□□ 2.41
COL16A1Q07092 UNC93B6-201ENST00000525262 1143 ntTSL 5 BASIC30.13■■■□□ 2.41
COL16A1Q07092 AL390816.2-201ENST00000554252 737 ntTSL 3 BASIC30.13■■■□□ 2.41
COL16A1Q07092 IL34-204ENST00000566361 1001 ntAPPRIS ALT2 TSL 1 (best) BASIC30.13■■■□□ 2.41
COL16A1Q07092 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC30.13■■■□□ 2.41
COL16A1Q07092 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC30.13■■■□□ 2.41
COL16A1Q07092 RTN2-208ENST00000590526 2357 ntTSL 5 BASIC30.13■■■□□ 2.41
COL16A1Q07092 ZFAND6-224ENST00000618205 1659 ntAPPRIS P1 TSL 5 BASIC30.13■■■□□ 2.41
COL16A1Q07092 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC30.12■■■□□ 2.41
COL16A1Q07092 AC144652.1-201ENST00000609974 1624 ntBASIC30.12■■■□□ 2.41
COL16A1Q07092 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC30.12■■■□□ 2.41
COL16A1Q07092 AL158047.1-201ENST00000445918 881 ntBASIC30.12■■■□□ 2.41
COL16A1Q07092 PET100-202ENST00000594797 719 ntAPPRIS P1 TSL 1 (best) BASIC30.12■■■□□ 2.41
COL16A1Q07092 TSEN34-204ENST00000429671 1912 ntTSL 2 BASIC30.12■■■□□ 2.41
COL16A1Q07092 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC30.11■■■□□ 2.41
COL16A1Q07092 RHEB-204ENST00000472642 900 ntTSL 3 BASIC30.11■■■□□ 2.41
COL16A1Q07092 AC084116.4-201ENST00000524320 484 ntTSL 2 BASIC30.11■■■□□ 2.41
COL16A1Q07092 PHB2-213ENST00000546111 858 ntTSL 2 BASIC30.11■■■□□ 2.41
COL16A1Q07092 AK4-208ENST00000546702 1335 ntTSL 1 (best) BASIC30.11■■■□□ 2.41
COL16A1Q07092 HLA-L-211ENST00000482052 1765 ntBASIC30.11■■■□□ 2.41
COL16A1Q07092 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC30.11■■■□□ 2.41
COL16A1Q07092 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.11■■■□□ 2.41
COL16A1Q07092 AC007285.1-201ENST00000422239 893 ntTSL 5 BASIC30.11■■■□□ 2.41
COL16A1Q07092 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC30.11■■■□□ 2.41
COL16A1Q07092 AL731577.2-201ENST00000508096 555 ntTSL 2 BASIC30.11■■■□□ 2.41
COL16A1Q07092 EIF3J-AS1-205ENST00000560750 1093 ntTSL 3 BASIC30.11■■■□□ 2.41
COL16A1Q07092 PROSER2-205ENST00000622831 1646 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
COL16A1Q07092 SHF-207ENST00000560540 2062 ntTSL 5 BASIC30.1■■■□□ 2.41
COL16A1Q07092 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
COL16A1Q07092 CCDC106-202ENST00000586790 2162 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
COL16A1Q07092 MIPEPP3-201ENST00000412105 444 ntBASIC30.1■■■□□ 2.41
COL16A1Q07092 C19orf84-201ENST00000570516 788 ntAPPRIS ALT2 TSL 1 (best) BASIC30.1■■■□□ 2.41
COL16A1Q07092 PSIP1-202ENST00000380716 1889 ntTSL 5 BASIC30.1■■■□□ 2.41
COL16A1Q07092 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC30.1■■■□□ 2.41
COL16A1Q07092 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC30.1■■■□□ 2.41
COL16A1Q07092 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC30.1■■■□□ 2.41
COL16A1Q07092 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
COL16A1Q07092 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC30.09■■■□□ 2.41
COL16A1Q07092 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC30.09■■■□□ 2.41
COL16A1Q07092 AC142381.4-202ENST00000563973 229 ntBASIC30.09■■■□□ 2.41
COL16A1Q07092 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC30.09■■■□□ 2.41
COL16A1Q07092 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC30.09■■■□□ 2.41
COL16A1Q07092 MTAP-204ENST00000460874 1434 ntTSL 2 BASIC30.09■■■□□ 2.41
COL16A1Q07092 AC005224.4-201ENST00000583262 1652 ntBASIC30.08■■■□□ 2.41
COL16A1Q07092 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC30.08■■■□□ 2.41
COL16A1Q07092 UNC93B4-201ENST00000505679 747 ntBASIC30.08■■■□□ 2.41
COL16A1Q07092 AL355102.2-201ENST00000553811 600 ntAPPRIS P1 TSL 2 BASIC30.08■■■□□ 2.41
COL16A1Q07092 USP36-216ENST00000589424 970 ntTSL 5 BASIC30.08■■■□□ 2.41
COL16A1Q07092 DM1-AS-203ENST00000590076 730 ntTSL 4 BASIC30.08■■■□□ 2.41
COL16A1Q07092 AC092118.2-201ENST00000613495 667 ntBASIC30.08■■■□□ 2.41
COL16A1Q07092 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC30.08■■■□□ 2.41
COL16A1Q07092 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC30.08■■■□□ 2.41
COL16A1Q07092 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC30.07■■■□□ 2.41
COL16A1Q07092 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC30.07■■■□□ 2.4
COL16A1Q07092 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC30.07■■■□□ 2.4
COL16A1Q07092 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC30.07■■■□□ 2.4
COL16A1Q07092 AC010536.3-201ENST00000620306 533 ntBASIC30.07■■■□□ 2.4
COL16A1Q07092 P2RX4-211ENST00000543171 1777 ntTSL 5 BASIC30.07■■■□□ 2.4
COL16A1Q07092 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC30.07■■■□□ 2.4
COL16A1Q07092 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC30.07■■■□□ 2.4
COL16A1Q07092 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC30.07■■■□□ 2.4
COL16A1Q07092 BAALC-201ENST00000297574 801 ntTSL 3 BASIC30.07■■■□□ 2.4
COL16A1Q07092 ABCC6P2-202ENST00000542005 706 ntTSL 1 (best) BASIC30.07■■■□□ 2.4
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms