Protein–RNA interactions for Protein: P61020

RAB5B, Ras-related protein Rab-5B, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5BP61020 HLA-L-211ENST00000482052 1765 ntBASIC17.22■□□□□ 0.35
RAB5BP61020 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
RAB5BP61020 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC17.22■□□□□ 0.35
RAB5BP61020 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.22■□□□□ 0.35
RAB5BP61020 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAB5BP61020 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
RAB5BP61020 HCG11-201ENST00000411553 5696 ntBASIC17.21■□□□□ 0.35
RAB5BP61020 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC17.21■□□□□ 0.35
RAB5BP61020 DMWD-202ENST00000377735 3292 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
RAB5BP61020 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB5BP61020 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
RAB5BP61020 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB5BP61020 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
RAB5BP61020 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB5BP61020 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
RAB5BP61020 MYO10-205ENST00000507288 1677 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
RAB5BP61020 H2AFV-202ENST00000308153 752 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB5BP61020 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB5BP61020 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB5BP61020 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB5BP61020 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
RAB5BP61020 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
RAB5BP61020 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC17.21■□□□□ 0.35
RAB5BP61020 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
RAB5BP61020 DIXDC1-205ENST00000529225 1945 ntTSL 5 BASIC17.21■□□□□ 0.35
RAB5BP61020 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC17.21■□□□□ 0.35
RAB5BP61020 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC17.21■□□□□ 0.35
RAB5BP61020 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
RAB5BP61020 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB5BP61020 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB5BP61020 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RAB5BP61020 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB5BP61020 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
RAB5BP61020 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB5BP61020 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC17.2■□□□□ 0.34
RAB5BP61020 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB5BP61020 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
RAB5BP61020 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RAB5BP61020 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.2■□□□□ 0.34
RAB5BP61020 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
RAB5BP61020 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB5BP61020 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB5BP61020 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RAB5BP61020 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.19■□□□□ 0.34
RAB5BP61020 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB5BP61020 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC17.19■□□□□ 0.34
RAB5BP61020 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC17.19■□□□□ 0.34
RAB5BP61020 ARFRP1-208ENST00000612256 2974 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RAB5BP61020 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB5BP61020 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB5BP61020 HRH3-201ENST00000317393 1419 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB5BP61020 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
RAB5BP61020 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC17.19■□□□□ 0.34
RAB5BP61020 SAC3D1-201ENST00000398846 1566 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
RAB5BP61020 NTRK3-206ENST00000540489 2145 ntTSL 5 BASIC17.18■□□□□ 0.34
RAB5BP61020 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.18■□□□□ 0.34
RAB5BP61020 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAB5BP61020 PTH1R-206ENST00000430002 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAB5BP61020 FAM129C-207ENST00000599124 1918 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAB5BP61020 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAB5BP61020 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAB5BP61020 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RAB5BP61020 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAB5BP61020 LINC01970-201ENST00000581489 1810 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RAB5BP61020 AC080038.3-201ENST00000623346 1952 ntBASIC17.18■□□□□ 0.34
RAB5BP61020 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RAB5BP61020 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAB5BP61020 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAB5BP61020 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC17.18■□□□□ 0.34
RAB5BP61020 LDLRAD3-203ENST00000528989 1879 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
RAB5BP61020 ENGASE-205ENST00000579016 2579 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAB5BP61020 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.18■□□□□ 0.34
RAB5BP61020 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.18■□□□□ 0.34
RAB5BP61020 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB5BP61020 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC17.17■□□□□ 0.34
RAB5BP61020 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB5BP61020 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB5BP61020 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.17■□□□□ 0.34
RAB5BP61020 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB5BP61020 RDX-202ENST00000405097 2761 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RAB5BP61020 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC17.17■□□□□ 0.34
RAB5BP61020 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
RAB5BP61020 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
RAB5BP61020 SDS-201ENST00000257549 1606 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
RAB5BP61020 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB5BP61020 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC17.17■□□□□ 0.34
RAB5BP61020 PLK5-201ENST00000334770 2106 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
RAB5BP61020 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB5BP61020 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.16■□□□□ 0.34
RAB5BP61020 ST3GAL5-214ENST00000638178 2034 ntTSL 5 BASIC17.16■□□□□ 0.34
RAB5BP61020 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
RAB5BP61020 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB5BP61020 ACHE-204ENST00000412389 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB5BP61020 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
RAB5BP61020 LINC01006-201ENST00000333319 2292 ntBASIC17.16■□□□□ 0.34
RAB5BP61020 LGALS3-201ENST00000254301 1146 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB5BP61020 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC17.16■□□□□ 0.34
RAB5BP61020 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB5BP61020 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
RAB5BP61020 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms