Protein–RNA interactions for Protein: P55822

SH3BGR, SH3 domain-binding glutamic acid-rich protein, humanhuman

Predicted RBP Predictions only

Length 239 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH3BGRP55822 ME2-202ENST00000382927 2492 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
SH3BGRP55822 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SH3BGRP55822 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC20.74■□□□□ 0.91
SH3BGRP55822 GPRC5B-202ENST00000535671 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SH3BGRP55822 CDKN2A-214ENST00000579755 1283 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SH3BGRP55822 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC20.74■□□□□ 0.91
SH3BGRP55822 FP236240.1-201ENST00000619537 1116 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SH3BGRP55822 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SH3BGRP55822 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SH3BGRP55822 Z83844.2-201ENST00000456099 1945 ntTSL 2 BASIC20.74■□□□□ 0.91
SH3BGRP55822 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC20.74■□□□□ 0.91
SH3BGRP55822 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SH3BGRP55822 BTBD6-205ENST00000536364 1973 ntAPPRIS P2 TSL 5 BASIC20.74■□□□□ 0.91
SH3BGRP55822 GFI1-201ENST00000294702 2784 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
SH3BGRP55822 CTF1-201ENST00000279804 1664 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SH3BGRP55822 BCKDHB-202ENST00000356489 1514 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SH3BGRP55822 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SH3BGRP55822 DIO3-201ENST00000510508 2102 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
SH3BGRP55822 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC20.73■□□□□ 0.91
SH3BGRP55822 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SH3BGRP55822 NPHS2-202ENST00000367616 1670 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SH3BGRP55822 NEK3-208ENST00000618534 2414 ntAPPRIS P2 TSL 5 BASIC20.73■□□□□ 0.91
SH3BGRP55822 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC20.73■□□□□ 0.91
SH3BGRP55822 LINC01521-201ENST00000504184 1943 ntBASIC20.72■□□□□ 0.91
SH3BGRP55822 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SH3BGRP55822 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SH3BGRP55822 DNAAF4-201ENST00000321149 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SH3BGRP55822 CDV3-201ENST00000264993 3307 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SH3BGRP55822 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
SH3BGRP55822 CT47A7-201ENST00000434883 1288 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
SH3BGRP55822 AC078883.1-201ENST00000442417 950 ntTSL 3 BASIC20.72■□□□□ 0.91
SH3BGRP55822 SSSCA1-AS1-201ENST00000567594 614 ntBASIC20.72■□□□□ 0.91
SH3BGRP55822 RFC2-201ENST00000055077 1695 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SH3BGRP55822 DTNB-207ENST00000405222 2273 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SH3BGRP55822 HOXA11-201ENST00000006015 2295 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
SH3BGRP55822 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SH3BGRP55822 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC20.72■□□□□ 0.91
SH3BGRP55822 PTGER3-204ENST00000356595 1943 ntAPPRIS P4 TSL 1 (best) BASIC20.72■□□□□ 0.91
SH3BGRP55822 PTGER3-207ENST00000370931 1914 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
SH3BGRP55822 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
SH3BGRP55822 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SH3BGRP55822 AC092053.2-201ENST00000640557 1818 ntBASIC20.71■□□□□ 0.91
SH3BGRP55822 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC20.71■□□□□ 0.91
SH3BGRP55822 ARHGAP11A-205ENST00000563864 2279 ntTSL 5 BASIC20.71■□□□□ 0.91
SH3BGRP55822 CNPY3-201ENST00000372836 1704 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SH3BGRP55822 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.71■□□□□ 0.91
SH3BGRP55822 CFAP77-202ENST00000393215 901 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
SH3BGRP55822 C5orf38-202ENST00000397835 681 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
SH3BGRP55822 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC20.71■□□□□ 0.91
SH3BGRP55822 MRGPRF-AS1-203ENST00000569432 542 ntTSL 4 BASIC20.71■□□□□ 0.91
SH3BGRP55822 MIR6089-201ENST00000616698 64 ntBASIC20.71■□□□□ 0.91
SH3BGRP55822 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC20.71■□□□□ 0.91
SH3BGRP55822 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
SH3BGRP55822 SNAP23-202ENST00000349777 2480 ntTSL 2 BASIC20.71■□□□□ 0.91
SH3BGRP55822 LURAP1L-201ENST00000319264 1753 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SH3BGRP55822 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SH3BGRP55822 DISC1-212ENST00000535983 2505 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
SH3BGRP55822 PELI3-202ENST00000349459 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SH3BGRP55822 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
SH3BGRP55822 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
SH3BGRP55822 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC20.71■□□□□ 0.91
SH3BGRP55822 BCR-202ENST00000359540 4708 ntTSL 1 (best) BASIC20.7■□□□□ 0.91
SH3BGRP55822 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
SH3BGRP55822 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
SH3BGRP55822 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
SH3BGRP55822 SLC25A1-202ENST00000451283 1514 ntTSL 2 BASIC20.7■□□□□ 0.9
SH3BGRP55822 AC026310.3-201ENST00000625186 2373 ntBASIC20.7■□□□□ 0.9
SH3BGRP55822 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SH3BGRP55822 CST6-201ENST00000312134 759 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SH3BGRP55822 TMEM238-201ENST00000444469 1000 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SH3BGRP55822 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC20.7■□□□□ 0.9
SH3BGRP55822 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC20.7■□□□□ 0.9
SH3BGRP55822 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SH3BGRP55822 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
SH3BGRP55822 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC20.7■□□□□ 0.9
SH3BGRP55822 OSCAR-201ENST00000284648 2055 ntAPPRIS ALT2 TSL 1 (best) BASIC20.69■□□□□ 0.9
SH3BGRP55822 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SH3BGRP55822 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SH3BGRP55822 RELA-201ENST00000308639 2681 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SH3BGRP55822 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
SH3BGRP55822 NAXE-203ENST00000368235 1125 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SH3BGRP55822 FAM173A-202ENST00000564000 1088 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
SH3BGRP55822 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SH3BGRP55822 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SH3BGRP55822 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SH3BGRP55822 MGAT5B-201ENST00000301618 4486 ntAPPRIS P3 TSL 5 BASIC20.69■□□□□ 0.9
SH3BGRP55822 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC20.69■□□□□ 0.9
SH3BGRP55822 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
SH3BGRP55822 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SH3BGRP55822 HOXB3-202ENST00000460160 1525 ntTSL 5 BASIC20.68■□□□□ 0.9
SH3BGRP55822 HTRA3-202ENST00000382512 2023 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SH3BGRP55822 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SH3BGRP55822 GNA12-201ENST00000275364 4378 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SH3BGRP55822 CNTFR-202ENST00000378980 2052 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SH3BGRP55822 ARL4D-201ENST00000320033 1612 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
SH3BGRP55822 SPTBN4-207ENST00000595535 6105 ntTSL 5 BASIC20.68■□□□□ 0.9
SH3BGRP55822 ZNF213-208ENST00000576416 2240 ntAPPRIS P1 TSL 2 BASIC20.68■□□□□ 0.9
SH3BGRP55822 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC20.68■□□□□ 0.9
SH3BGRP55822 NDUFA10-204ENST00000407129 699 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
SH3BGRP55822 AC011551.1-201ENST00000614101 683 ntBASIC20.68■□□□□ 0.9
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms