Protein–RNA interactions for Protein: P43308

SSR2, Translocon-associated protein subunit beta, humanhuman

Predictions only

Length 183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSR2P43308 CASP9-203ENST00000375890 1351 ntTSL 2 BASIC20.87■□□□□ 0.93
SSR2P43308 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SSR2P43308 UNC93B3-201ENST00000308076 687 ntBASIC20.87■□□□□ 0.93
SSR2P43308 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
SSR2P43308 HM13-AS1-201ENST00000412178 489 ntTSL 3 BASIC20.87■□□□□ 0.93
SSR2P43308 AL357078.1-201ENST00000448344 310 ntTSL 4 BASIC20.87■□□□□ 0.93
SSR2P43308 C19orf60-202ENST00000450195 702 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
SSR2P43308 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
SSR2P43308 ZNF584-205ENST00000596281 575 ntTSL 2 BASIC20.87■□□□□ 0.93
SSR2P43308 ZNF264-206ENST00000600531 774 ntTSL 2 BASIC20.87■□□□□ 0.93
SSR2P43308 AC136469.2-201ENST00000623944 1028 ntBASIC20.87■□□□□ 0.93
SSR2P43308 HOXC8-201ENST00000040584 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SSR2P43308 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SSR2P43308 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SSR2P43308 DPEP2-204ENST00000572888 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SSR2P43308 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
SSR2P43308 HIRA-201ENST00000263208 4053 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SSR2P43308 ARX-201ENST00000379044 2876 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SSR2P43308 AC087742.1-201ENST00000575880 1738 ntBASIC20.87■□□□□ 0.93
SSR2P43308 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
SSR2P43308 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC20.87■□□□□ 0.93
SSR2P43308 IGFBP1-201ENST00000275525 1653 ntAPPRIS P2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SSR2P43308 HAS1-202ENST00000540069 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SSR2P43308 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
SSR2P43308 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.86■□□□□ 0.93
SSR2P43308 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC20.86■□□□□ 0.93
SSR2P43308 OR2I1P-207ENST00000453522 948 ntBASIC20.86■□□□□ 0.93
SSR2P43308 ATP6V0E2-204ENST00000464662 513 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SSR2P43308 CDKN2A-208ENST00000498124 880 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SSR2P43308 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SSR2P43308 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
SSR2P43308 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SSR2P43308 OAZ2-201ENST00000326005 1934 ntAPPRIS P1 TSL 5 BASIC20.86■□□□□ 0.93
SSR2P43308 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.86■□□□□ 0.93
SSR2P43308 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC20.86■□□□□ 0.93
SSR2P43308 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC20.86■□□□□ 0.93
SSR2P43308 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC20.85■□□□□ 0.93
SSR2P43308 CDR2-201ENST00000268383 2702 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SSR2P43308 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SSR2P43308 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SSR2P43308 NPY4R-201ENST00000374312 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SSR2P43308 GUSBP5-202ENST00000510805 1989 ntBASIC20.85■□□□□ 0.93
SSR2P43308 NPY4R2-201ENST00000576178 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SSR2P43308 TMEM121-202ENST00000431372 1519 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
SSR2P43308 LRRC34-201ENST00000446859 1718 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
SSR2P43308 HYI-204ENST00000372432 1066 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SSR2P43308 STOX1-202ENST00000399162 935 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SSR2P43308 STOX1-203ENST00000399165 1135 ntTSL 1 (best) BASIC20.85■□□□□ 0.93
SSR2P43308 PTMA-205ENST00000410064 814 ntTSL 2 BASIC20.85■□□□□ 0.93
SSR2P43308 SERTAD4-AS1-202ENST00000475406 591 ntTSL 2 BASIC20.85■□□□□ 0.93
SSR2P43308 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC20.85■□□□□ 0.93
SSR2P43308 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
SSR2P43308 CNTD2-202ENST00000430325 1817 ntAPPRIS P2 TSL 2 BASIC20.85■□□□□ 0.93
SSR2P43308 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.85■□□□□ 0.93
SSR2P43308 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SSR2P43308 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SSR2P43308 AC127496.7-201ENST00000625110 1798 ntBASIC20.85■□□□□ 0.93
SSR2P43308 CENPH-201ENST00000283006 1389 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
SSR2P43308 AL117328.2-201ENST00000624617 1940 ntBASIC20.84■□□□□ 0.93
SSR2P43308 PYGO2-201ENST00000368456 1306 ntTSL 2 BASIC20.84■□□□□ 0.93
SSR2P43308 PLEKHJ1-206ENST00000587962 1311 ntTSL 2 BASIC20.84■□□□□ 0.93
SSR2P43308 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SSR2P43308 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC20.84■□□□□ 0.93
SSR2P43308 AL136162.1-201ENST00000607711 1078 ntBASIC20.84■□□□□ 0.93
SSR2P43308 HOXA4-201ENST00000360046 1747 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
SSR2P43308 AP004608.1-202ENST00000533390 1863 ntTSL 1 (best) BASIC20.84■□□□□ 0.93
SSR2P43308 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.93
SSR2P43308 IGDCC4-201ENST00000352385 6508 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SSR2P43308 NAPRT-204ENST00000449291 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SSR2P43308 STX4-201ENST00000313843 1481 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SSR2P43308 STX4-202ENST00000394998 1498 ntTSL 2 BASIC20.83■□□□□ 0.93
SSR2P43308 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
SSR2P43308 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
SSR2P43308 ARL2BP-201ENST00000219204 2130 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SSR2P43308 PLEKHO1-201ENST00000369124 2050 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
SSR2P43308 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.83■□□□□ 0.93
SSR2P43308 AC096631.2-201ENST00000436136 790 ntBASIC20.83■□□□□ 0.93
SSR2P43308 AC004707.1-201ENST00000511627 715 ntTSL 3 BASIC20.83■□□□□ 0.93
SSR2P43308 SAP25-203ENST00000614631 987 ntAPPRIS P2 TSL 2 BASIC20.83■□□□□ 0.93
SSR2P43308 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC20.83■□□□□ 0.92
SSR2P43308 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
SSR2P43308 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SSR2P43308 NRL-203ENST00000397002 1976 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SSR2P43308 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SSR2P43308 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SSR2P43308 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SSR2P43308 HES4-201ENST00000304952 899 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SSR2P43308 LYPD2-201ENST00000359228 594 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SSR2P43308 CCDC107-203ENST00000378407 899 ntAPPRIS ALT2 TSL 2 BASIC20.82■□□□□ 0.92
SSR2P43308 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC20.82■□□□□ 0.92
SSR2P43308 CDKN3-207ENST00000543789 610 ntTSL 5 BASIC20.82■□□□□ 0.92
SSR2P43308 NRL-205ENST00000560550 788 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SSR2P43308 FAHD1-201ENST00000382666 1964 ntTSL 2 BASIC20.82■□□□□ 0.92
SSR2P43308 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SSR2P43308 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SSR2P43308 UCHL5-201ENST00000367448 1534 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SSR2P43308 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SSR2P43308 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SSR2P43308 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SSR2P43308 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 53 ms