Protein–RNA interactions for Protein: O75954

TSPAN9, Tetraspanin-9, humanhuman

Predictions only

Length 239 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN9O75954 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TSPAN9O75954 PCMT1-202ENST00000367380 1628 ntTSL 2 BASIC18.67■□□□□ 0.58
TSPAN9O75954 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TSPAN9O75954 PCMT1-211ENST00000544496 1628 ntTSL 2 BASIC18.67■□□□□ 0.58
TSPAN9O75954 NFKBIB-204ENST00000572515 1929 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TSPAN9O75954 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TSPAN9O75954 LYL1-201ENST00000264824 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TSPAN9O75954 LRRC1-201ENST00000370882 808 ntTSL 3 BASIC18.66■□□□□ 0.58
TSPAN9O75954 PEMT-206ENST00000435340 960 ntTSL 5 BASIC18.66■□□□□ 0.58
TSPAN9O75954 GDF6-202ENST00000620978 973 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TSPAN9O75954 PKMYT1-211ENST00000573944 1891 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
TSPAN9O75954 CADM4-201ENST00000222374 2178 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TSPAN9O75954 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
TSPAN9O75954 PAOX-203ENST00000357296 1633 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TSPAN9O75954 B3GNT6-202ENST00000622824 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TSPAN9O75954 NR2F1-AS1-214ENST00000607831 1963 ntTSL 2 BASIC18.66■□□□□ 0.58
TSPAN9O75954 CLDN15-201ENST00000308344 1370 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TSPAN9O75954 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TSPAN9O75954 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TSPAN9O75954 SNRNP70-206ENST00000598441 1574 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TSPAN9O75954 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TSPAN9O75954 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.65■□□□□ 0.58
TSPAN9O75954 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC18.65■□□□□ 0.58
TSPAN9O75954 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TSPAN9O75954 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
TSPAN9O75954 HNRNPLL-203ENST00000378915 2523 ntTSL 5 BASIC18.65■□□□□ 0.58
TSPAN9O75954 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TSPAN9O75954 SLC52A2-208ENST00000527078 1790 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TSPAN9O75954 TFAP2A-202ENST00000379608 2576 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TSPAN9O75954 SCRT1-201ENST00000569446 3779 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TSPAN9O75954 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.65■□□□□ 0.58
TSPAN9O75954 LRRC61-205ENST00000493307 1456 ntAPPRIS P1 TSL 5 BASIC18.65■□□□□ 0.58
TSPAN9O75954 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TSPAN9O75954 TMEM250-205ENST00000561457 2804 ntAPPRIS P1 TSL 2 BASIC18.64■□□□□ 0.58
TSPAN9O75954 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
TSPAN9O75954 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC18.64■□□□□ 0.58
TSPAN9O75954 HNRNPD-203ENST00000353341 1585 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
TSPAN9O75954 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TSPAN9O75954 GNB2-203ENST00000393926 1641 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TSPAN9O75954 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
TSPAN9O75954 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TSPAN9O75954 AQP1-202ENST00000409611 1140 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
TSPAN9O75954 ZNF641-205ENST00000547026 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TSPAN9O75954 PNMA8B-202ENST00000599531 5308 ntAPPRIS P1 BASIC18.64■□□□□ 0.57
TSPAN9O75954 PTH1R-202ENST00000418619 2070 ntAPPRIS P1 TSL 5 BASIC18.64■□□□□ 0.57
TSPAN9O75954 FARP2-223ENST00000627550 2122 ntTSL 2 BASIC18.64■□□□□ 0.57
TSPAN9O75954 C8orf82-201ENST00000313465 2186 ntAPPRIS ALT2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TSPAN9O75954 PRSS56-201ENST00000449534 2157 ntAPPRIS ALT2 TSL 5 BASIC18.64■□□□□ 0.57
TSPAN9O75954 PRSS56-203ENST00000617714 2158 ntAPPRIS P2 TSL 5 BASIC18.64■□□□□ 0.57
TSPAN9O75954 SLC35A2-209ENST00000452555 1563 ntTSL 2 BASIC18.64■□□□□ 0.57
TSPAN9O75954 SUGCT-209ENST00000628514 1591 ntAPPRIS P4 TSL 1 (best) BASIC18.64■□□□□ 0.57
TSPAN9O75954 EFHD1-201ENST00000264059 2259 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TSPAN9O75954 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TSPAN9O75954 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC18.63■□□□□ 0.57
TSPAN9O75954 MZF1-203ENST00000594234 2385 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TSPAN9O75954 PPP2R2C-203ENST00000382599 1807 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TSPAN9O75954 RITA1-203ENST00000552495 1898 ntTSL 2 BASIC18.63■□□□□ 0.57
TSPAN9O75954 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
TSPAN9O75954 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC18.63■□□□□ 0.57
TSPAN9O75954 AC092807.3-205ENST00000467666 531 ntTSL 3 BASIC18.63■□□□□ 0.57
TSPAN9O75954 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC18.63■□□□□ 0.57
TSPAN9O75954 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC18.63■□□□□ 0.57
TSPAN9O75954 AC010997.5-201ENST00000609182 354 ntBASIC18.63■□□□□ 0.57
TSPAN9O75954 MSX2-201ENST00000239243 2241 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
TSPAN9O75954 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC18.63■□□□□ 0.57
TSPAN9O75954 CCNJL-201ENST00000257536 1848 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
TSPAN9O75954 BCS1L-210ENST00000431802 2015 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
TSPAN9O75954 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TSPAN9O75954 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TSPAN9O75954 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC18.62■□□□□ 0.57
TSPAN9O75954 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TSPAN9O75954 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC18.62■□□□□ 0.57
TSPAN9O75954 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.62■□□□□ 0.57
TSPAN9O75954 TK2-202ENST00000417693 1046 ntTSL 2 BASIC18.62■□□□□ 0.57
TSPAN9O75954 IGFBP7-203ENST00000514062 1251 ntAPPRIS ALT2 TSL 2 BASIC18.62■□□□□ 0.57
TSPAN9O75954 EIF3J-203ENST00000535391 925 ntTSL 2 BASIC18.62■□□□□ 0.57
TSPAN9O75954 RBM42-206ENST00000592202 1469 ntTSL 5 BASIC18.62■□□□□ 0.57
TSPAN9O75954 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC18.62■□□□□ 0.57
TSPAN9O75954 IQANK1-201ENST00000527139 1803 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
TSPAN9O75954 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TSPAN9O75954 FAM193B-217ENST00000514747 2913 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
TSPAN9O75954 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TSPAN9O75954 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TSPAN9O75954 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TSPAN9O75954 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TSPAN9O75954 TMED4-201ENST00000289577 2203 ntTSL 2 BASIC18.61■□□□□ 0.57
TSPAN9O75954 GNAL-201ENST00000269162 1722 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
TSPAN9O75954 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TSPAN9O75954 FOSL1-202ENST00000448083 1427 ntTSL 2 BASIC18.61■□□□□ 0.57
TSPAN9O75954 TSPAN4-202ENST00000397396 1332 ntTSL 5 BASIC18.61■□□□□ 0.57
TSPAN9O75954 EPHA10-211ENST00000540011 720 ntTSL 5 BASIC18.61■□□□□ 0.57
TSPAN9O75954 HNRNPUL1-222ENST00000617774 451 ntTSL 5 BASIC18.61■□□□□ 0.57
TSPAN9O75954 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TSPAN9O75954 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TSPAN9O75954 MARK2-211ENST00000513765 2671 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TSPAN9O75954 ZNF688-201ENST00000223459 2506 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TSPAN9O75954 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
TSPAN9O75954 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
TSPAN9O75954 FPGS-221ENST00000630236 2160 ntTSL 5 BASIC18.61■□□□□ 0.57
TSPAN9O75954 BBC3-203ENST00000439096 1838 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 22.3 ms