Protein–RNA interactions for Protein: B2RUZ4

SMIM1, Small integral membrane protein 1, humanhuman

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM1B2RUZ4 AC092490.1-203ENST00000514568 1972 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SMIM1B2RUZ4 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
SMIM1B2RUZ4 MTERF3-201ENST00000287025 1409 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
SMIM1B2RUZ4 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC14.81□□□□□ -0.04
SMIM1B2RUZ4 AC233992.2-201ENST00000531225 1596 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
SMIM1B2RUZ4 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC14.81□□□□□ -0.04
SMIM1B2RUZ4 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
SMIM1B2RUZ4 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM1B2RUZ4 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC14.8□□□□□ -0.04
SMIM1B2RUZ4 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC14.8□□□□□ -0.04
SMIM1B2RUZ4 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM1B2RUZ4 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM1B2RUZ4 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM1B2RUZ4 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC14.8□□□□□ -0.04
SMIM1B2RUZ4 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM1B2RUZ4 SAV1-201ENST00000324679 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM1B2RUZ4 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM1B2RUZ4 GNB1-209ENST00000610897 3145 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SMIM1B2RUZ4 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC14.8□□□□□ -0.04
SMIM1B2RUZ4 CLIC3-203ENST00000494426 1017 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM1B2RUZ4 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM1B2RUZ4 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC14.8□□□□□ -0.04
SMIM1B2RUZ4 COMMD5-201ENST00000305103 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM1B2RUZ4 SLC1A5-203ENST00000542575 2882 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM1B2RUZ4 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM1B2RUZ4 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM1B2RUZ4 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM1B2RUZ4 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM1B2RUZ4 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM1B2RUZ4 MAPK9-203ENST00000393360 4326 ntTSL 5 BASIC14.8□□□□□ -0.04
SMIM1B2RUZ4 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
SMIM1B2RUZ4 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
SMIM1B2RUZ4 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC14.8□□□□□ -0.04
SMIM1B2RUZ4 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMIM1B2RUZ4 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMIM1B2RUZ4 MT2A-201ENST00000245185 786 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMIM1B2RUZ4 FFAR1-201ENST00000246553 2311 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
SMIM1B2RUZ4 FAM53B-201ENST00000280780 1568 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SMIM1B2RUZ4 PGRMC2-201ENST00000296425 2767 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMIM1B2RUZ4 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMIM1B2RUZ4 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SMIM1B2RUZ4 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMIM1B2RUZ4 MPND-202ENST00000359935 1475 ntAPPRIS ALT2 TSL 2 BASIC14.79□□□□□ -0.04
SMIM1B2RUZ4 CITED4-201ENST00000372638 1316 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
SMIM1B2RUZ4 RBMS1-205ENST00000409972 1815 ntTSL 5 BASIC14.79□□□□□ -0.04
SMIM1B2RUZ4 AC139795.1-202ENST00000500444 432 ntBASIC14.79□□□□□ -0.04
SMIM1B2RUZ4 ABHD17AP3-201ENST00000503096 1137 ntBASIC14.79□□□□□ -0.04
SMIM1B2RUZ4 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMIM1B2RUZ4 AC084757.3-201ENST00000558061 1943 ntTSL 3 BASIC14.79□□□□□ -0.04
SMIM1B2RUZ4 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
SMIM1B2RUZ4 C1QTNF1-207ENST00000580454 1396 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.04
SMIM1B2RUZ4 THA1P-201ENST00000590384 1145 ntBASIC14.79□□□□□ -0.04
SMIM1B2RUZ4 ITGBL1-206ENST00000618057 2368 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
SMIM1B2RUZ4 LINC01529-204ENST00000636474 1715 ntBASIC14.79□□□□□ -0.04
SMIM1B2RUZ4 ADCK2-201ENST00000072869 2377 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMIM1B2RUZ4 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
SMIM1B2RUZ4 KCNMB4-201ENST00000258111 4731 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMIM1B2RUZ4 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMIM1B2RUZ4 CHRNA7-203ENST00000454250 2093 ntAPPRIS ALT2 TSL 2 BASIC14.78□□□□□ -0.04
SMIM1B2RUZ4 EPHA6-202ENST00000470610 2058 ntTSL 2 BASIC14.78□□□□□ -0.04
SMIM1B2RUZ4 NEU4-204ENST00000405370 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMIM1B2RUZ4 PHOX2B-201ENST00000226382 3030 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMIM1B2RUZ4 TMEFF1-201ENST00000374879 2611 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMIM1B2RUZ4 SDHAF1-201ENST00000378887 1117 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
SMIM1B2RUZ4 CDCA5-202ENST00000404147 1012 ntTSL 2 BASIC14.78□□□□□ -0.04
SMIM1B2RUZ4 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMIM1B2RUZ4 H2AFB1-201ENST00000620016 587 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
SMIM1B2RUZ4 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMIM1B2RUZ4 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMIM1B2RUZ4 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMIM1B2RUZ4 DISC1-205ENST00000366636 2224 ntAPPRIS P4 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMIM1B2RUZ4 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
SMIM1B2RUZ4 HADH-201ENST00000309522 1912 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
SMIM1B2RUZ4 GPR6-202ENST00000414000 1945 ntTSL 2 BASIC14.78□□□□□ -0.04
SMIM1B2RUZ4 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC14.77□□□□□ -0.04
SMIM1B2RUZ4 POLD2-207ENST00000452185 1659 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SMIM1B2RUZ4 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SMIM1B2RUZ4 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
SMIM1B2RUZ4 RAP2C-202ENST00000370874 2333 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
SMIM1B2RUZ4 AL391650.1-201ENST00000448923 1468 ntAPPRIS P1 TSL 2 BASIC14.77□□□□□ -0.04
SMIM1B2RUZ4 CREB3L3-205ENST00000602257 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
SMIM1B2RUZ4 PRRT4-207ENST00000535159 2897 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
SMIM1B2RUZ4 REST-206ENST00000612429 1376 ntTSL 5 BASIC14.77□□□□□ -0.04
SMIM1B2RUZ4 REST-207ENST00000616975 1370 ntTSL 5 BASIC14.77□□□□□ -0.04
SMIM1B2RUZ4 REST-212ENST00000640343 1352 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
SMIM1B2RUZ4 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
SMIM1B2RUZ4 GUCD1-207ENST00000447813 895 ntTSL 3 BASIC14.77□□□□□ -0.05
SMIM1B2RUZ4 ERFE-207ENST00000546354 1065 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
SMIM1B2RUZ4 TMEM170A-206ENST00000569276 609 ntTSL 2 BASIC14.77□□□□□ -0.05
SMIM1B2RUZ4 NDEL1-219ENST00000585098 454 ntTSL 3 BASIC14.77□□□□□ -0.05
SMIM1B2RUZ4 U85056.1-201ENST00000616429 682 ntBASIC14.77□□□□□ -0.05
SMIM1B2RUZ4 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
SMIM1B2RUZ4 CIZ1-203ENST00000357558 2907 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
SMIM1B2RUZ4 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
SMIM1B2RUZ4 AC073130.3-201ENST00000624389 2278 ntBASIC14.77□□□□□ -0.05
SMIM1B2RUZ4 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC14.77□□□□□ -0.05
SMIM1B2RUZ4 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC14.76□□□□□ -0.05
SMIM1B2RUZ4 TMEM44-204ENST00000392432 2490 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
SMIM1B2RUZ4 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC14.76□□□□□ -0.05
SMIM1B2RUZ4 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Retrieved 100 of 98,524 protein–RNA pairs in 31.1 ms