Protein–RNA interactions for Protein: P43005

SLC1A1, Excitatory amino acid transporter 3, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A1P43005 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC13.52□□□□□ -0.25
SLC1A1P43005 ROPN1B-203ENST00000505382 713 ntTSL 2 BASIC13.52□□□□□ -0.25
SLC1A1P43005 MRPL51-205ENST00000543164 814 ntTSL 2 BASIC13.52□□□□□ -0.25
SLC1A1P43005 MRPL51-206ENST00000543703 441 ntTSL 3 BASIC13.52□□□□□ -0.25
SLC1A1P43005 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC13.52□□□□□ -0.25
SLC1A1P43005 ZFAND6-220ENST00000561060 891 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SLC1A1P43005 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC13.52□□□□□ -0.25
SLC1A1P43005 NAMA-206ENST00000605377 509 ntTSL 5 BASIC13.52□□□□□ -0.25
SLC1A1P43005 HLA-C-210ENST00000640219 976 ntBASIC13.52□□□□□ -0.25
SLC1A1P43005 HS6ST1-201ENST00000259241 3932 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SLC1A1P43005 PSMC4-202ENST00000455878 1333 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SLC1A1P43005 ASGR2-201ENST00000254850 1396 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
SLC1A1P43005 ASGR2-202ENST00000355035 1386 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
SLC1A1P43005 NDUFB11-202ENST00000377811 1388 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SLC1A1P43005 ECH1-201ENST00000221418 1411 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SLC1A1P43005 AL353759.1-201ENST00000635439 1578 ntTSL 5 BASIC13.52□□□□□ -0.25
SLC1A1P43005 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
SLC1A1P43005 ENO1-201ENST00000234590 1783 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SLC1A1P43005 SMAD1-215ENST00000515385 2085 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
SLC1A1P43005 TRAP1-201ENST00000246957 2296 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SLC1A1P43005 RPL31-207ENST00000409711 2328 ntTSL 2 BASIC13.52□□□□□ -0.25
SLC1A1P43005 AC105402.3-202ENST00000446781 2592 ntTSL 5 BASIC13.52□□□□□ -0.25
SLC1A1P43005 SLC13A2-201ENST00000314669 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SLC1A1P43005 RCBTB2-206ENST00000544904 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SLC1A1P43005 PYGM-201ENST00000164139 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SLC1A1P43005 PERM1-202ENST00000433179 3340 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
SLC1A1P43005 FAM230B-208ENST00000451257 3566 ntTSL 5 BASIC13.52□□□□□ -0.25
SLC1A1P43005 SLC6A7-201ENST00000230671 3739 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
SLC1A1P43005 ADAMTSL4-202ENST00000369038 4167 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
SLC1A1P43005 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SLC1A1P43005 NUP58-206ENST00000463407 6360 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SLC1A1P43005 LEPROT-201ENST00000371065 4622 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SLC1A1P43005 KCNH1-202ENST00000367007 3445 ntTSL 5 BASIC13.51□□□□□ -0.25
SLC1A1P43005 PPP4R3A-206ENST00000554943 3369 ntTSL 5 BASIC13.51□□□□□ -0.25
SLC1A1P43005 DLGAP2-201ENST00000421627 3165 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
SLC1A1P43005 FCHO1-234ENST00000600676 3094 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
SLC1A1P43005 C3orf38-201ENST00000318887 2633 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SLC1A1P43005 TROVE2-208ENST00000432079 7848 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SLC1A1P43005 SLC4A1AP-206ENST00000618046 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SLC1A1P43005 FOXN3-219ENST00000615335 2421 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
SLC1A1P43005 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SLC1A1P43005 RPL10-218ENST00000618723 2210 ntTSL 5 BASIC13.51□□□□□ -0.25
SLC1A1P43005 CCR7-201ENST00000246657 2173 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SLC1A1P43005 HYLS1-202ENST00000425380 2061 ntAPPRIS P1 TSL 3 BASIC13.51□□□□□ -0.25
SLC1A1P43005 CLEC17A-203ENST00000547437 2065 ntTSL 2 BASIC13.51□□□□□ -0.25
SLC1A1P43005 LINC00355-201ENST00000456627 1878 ntTSL 2 BASIC13.51□□□□□ -0.25
SLC1A1P43005 CXorf40A-203ENST00000422892 1536 ntAPPRIS ALT1 TSL 2 BASIC13.51□□□□□ -0.25
SLC1A1P43005 ZNF397-209ENST00000591206 1516 ntTSL 2 BASIC13.51□□□□□ -0.25
SLC1A1P43005 AC005906.2-205ENST00000640862 1522 ntTSL 5 BASIC13.51□□□□□ -0.25
SLC1A1P43005 ESYT1-202ENST00000394048 4388 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
SLC1A1P43005 CAMK2B-202ENST00000346990 1448 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SLC1A1P43005 PIGL-201ENST00000225609 1137 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SLC1A1P43005 GTF3C6-201ENST00000329970 952 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SLC1A1P43005 TNNT2-206ENST00000367320 1007 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SLC1A1P43005 ARPC5-203ENST00000367534 622 ntTSL 3 BASIC13.51□□□□□ -0.25
SLC1A1P43005 BCAS2-201ENST00000369541 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SLC1A1P43005 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SLC1A1P43005 AC131097.2-203ENST00000401641 507 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
SLC1A1P43005 CCL24-202ENST00000416943 585 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SLC1A1P43005 AC069218.1-201ENST00000435269 762 ntBASIC13.51□□□□□ -0.25
SLC1A1P43005 AC027612.2-202ENST00000445955 1199 ntBASIC13.51□□□□□ -0.25
SLC1A1P43005 AC078852.2-201ENST00000504748 527 ntTSL 5 BASIC13.51□□□□□ -0.25
SLC1A1P43005 AC106872.8-201ENST00000507651 684 ntBASIC13.51□□□□□ -0.25
SLC1A1P43005 TGFBI-207ENST00000508076 1034 ntTSL 2 BASIC13.51□□□□□ -0.25
SLC1A1P43005 KIAA1191-210ENST00000510164 1243 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SLC1A1P43005 IMMP1L-202ENST00000526776 469 ntTSL 3 BASIC13.51□□□□□ -0.25
SLC1A1P43005 AC078878.2-201ENST00000543451 286 ntTSL 5 BASIC13.51□□□□□ -0.25
SLC1A1P43005 DUXAP9-201ENST00000547220 665 ntTSL 3 BASIC13.51□□□□□ -0.25
SLC1A1P43005 CR383656.13-201ENST00000550928 563 ntTSL 3 BASIC13.51□□□□□ -0.25
SLC1A1P43005 AL512310.10-201ENST00000555580 563 ntTSL 3 BASIC13.51□□□□□ -0.25
SLC1A1P43005 AC105105.3-201ENST00000585470 646 ntTSL 5 BASIC13.51□□□□□ -0.25
SLC1A1P43005 TLE2-205ENST00000586422 389 ntTSL 5 BASIC13.51□□□□□ -0.25
SLC1A1P43005 AC015936.1-201ENST00000591013 1028 ntBASIC13.51□□□□□ -0.25
SLC1A1P43005 KF455155.1-201ENST00000604493 303 ntBASIC13.51□□□□□ -0.25
SLC1A1P43005 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
SLC1A1P43005 AL136040.2-201ENST00000618431 1130 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SLC1A1P43005 AC117500.5-201ENST00000623233 527 ntBASIC13.51□□□□□ -0.25
SLC1A1P43005 AC005274.1-201ENST00000623460 802 ntBASIC13.51□□□□□ -0.25
SLC1A1P43005 LINC00694-204ENST00000637612 1059 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
SLC1A1P43005 BCL2L13-214ENST00000543133 4975 ntTSL 2 BASIC13.51□□□□□ -0.25
SLC1A1P43005 CHD4-211ENST00000544484 6554 ntTSL 2 BASIC13.51□□□□□ -0.25
SLC1A1P43005 ZSWIM3-201ENST00000255152 2773 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
SLC1A1P43005 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SLC1A1P43005 NBPF3-203ENST00000342104 3704 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
SLC1A1P43005 SPTBN2-204ENST00000529997 8085 ntTSL 5 BASIC13.51□□□□□ -0.25
SLC1A1P43005 ADAM32-206ENST00000519315 2168 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
SLC1A1P43005 LRRN2-201ENST00000367175 5036 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
SLC1A1P43005 AC134407.3-201ENST00000624035 2139 ntBASIC13.51□□□□□ -0.25
SLC1A1P43005 GMPS-201ENST00000295920 2024 ntTSL 2 BASIC13.51□□□□□ -0.25
SLC1A1P43005 HYOU1-221ENST00000621959 3358 ntTSL 2 BASIC13.51□□□□□ -0.25
SLC1A1P43005 LINC00840-201ENST00000431737 1974 ntTSL 2 BASIC13.51□□□□□ -0.25
SLC1A1P43005 CORO7-PAM16-202ENST00000572467 3284 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
SLC1A1P43005 TNK1-201ENST00000570896 3122 ntAPPRIS P3 TSL 5 BASIC13.5□□□□□ -0.25
SLC1A1P43005 ATG10-201ENST00000282185 3033 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SLC1A1P43005 AQP2-201ENST00000199280 4174 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SLC1A1P43005 SYMPK-201ENST00000245934 4195 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
SLC1A1P43005 TUBD1-202ENST00000340993 1769 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SLC1A1P43005 PAPLN-203ENST00000554301 4090 ntAPPRIS ALT2 TSL 2 BASIC13.5□□□□□ -0.25
SLC1A1P43005 SP140L-205ENST00000458341 1727 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
SLC1A1P43005 SEPT9-207ENST00000449803 3996 ntTSL 2 BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms