RNA–Protein interactions for RNA: ENST00000342104.9

NBPF3-203, Transcript of NBPF member 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene NBPF3, Length 3,704 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NBPF3-203ENST00000342104 NISCHQ9Y2I1 1504 aa26.83■■□□□ 1.89
NBPF3-203ENST00000342104 CCDC180Q9P1Z9 1646 aa22.95■■□□□ 1.27
NBPF3-203ENST00000342104 SHROOM4Q9ULL8 1493 aa22.69■■□□□ 1.22
NBPF3-203ENST00000342104 ZCCHC6Q5VYS8 1495 aaKnown RBP22.62■■□□□ 1.21
NBPF3-203ENST00000342104 DCAF8L2P0C7V8 631 aa22.48■■□□□ 1.19
NBPF3-203ENST00000342104 SUPT5HO00267 1087 aaKnown RBP22.17■■□□□ 1.14
NBPF3-203ENST00000342104 DCAF1Q9Y4B6 1507 aa22.03■■□□□ 1.12
NBPF3-203ENST00000342104 ABCC9O60706 1549 aa21.55■■□□□ 1.04
NBPF3-203ENST00000342104 MYO15BQ96JP2 1530 aa21.51■■□□□ 1.03
NBPF3-203ENST00000342104 SCRIBQ14160 1630 aa21.46■■□□□ 1.03
NBPF3-203ENST00000342104 CHIC1Q5VXU3 224 aa21.36■■□□□ 1.01
NBPF3-203ENST00000342104 NACADO15069 1562 aa21.34■■□□□ 1.01
NBPF3-203ENST00000342104 RSF1Q96T23 1441 aaPredicted RBP21.11■□□□□ 0.97
NBPF3-203ENST00000342104 RB1CC1Q8TDY2 1594 aa21.06■□□□□ 0.96
NBPF3-203ENST00000342104 CECR2Q9BXF3 1484 aa20.91■□□□□ 0.94
NBPF3-203ENST00000342104 MROH2BQ7Z745 1585 aa20.81■□□□□ 0.92
NBPF3-203ENST00000342104 TRIM41Q8WV44 630 aa20.71■□□□□ 0.91
NBPF3-203ENST00000342104 LOC105371045A0A1W2PR82 267 aa20.68■□□□□ 0.9
NBPF3-203ENST00000342104 BAZ1AQ9NRL2 1556 aaPredicted RBP20.67■□□□□ 0.9
NBPF3-203ENST00000342104 WIZO95785 1651 aa20.66■□□□□ 0.9
NBPF3-203ENST00000342104 PABPN1Q86U42 306 aaKnown RBP eCLIP20.56■□□□□ 0.88
NBPF3-203ENST00000342104 UNC13AQ9UPW8 1703 aa20.55■□□□□ 0.88
NBPF3-203ENST00000342104 FAM9AQ8IZU1 332 aaPredicted RBP20.51■□□□□ 0.87
NBPF3-203ENST00000342104 SMARCA4P51532 1647 aa20.48■□□□□ 0.87
NBPF3-203ENST00000342104 PCGF6Q9BYE7 350 aa20.42■□□□□ 0.86
NBPF3-203ENST00000342104 TOP2AP11388 1531 aaKnown RBP20.4■□□□□ 0.86
NBPF3-203ENST00000342104 BICRAQ9NZM4 1560 aa20.37■□□□□ 0.85
NBPF3-203ENST00000342104 EHMT2Q96KQ7 1210 aa20.31■□□□□ 0.84
NBPF3-203ENST00000342104 CCDC88BA6NC98 1476 aa20.29■□□□□ 0.84
NBPF3-203ENST00000342104 SMARCA2P51531 1590 aa20.24■□□□□ 0.83
NBPF3-203ENST00000342104 HRCP23327 699 aa20.2■□□□□ 0.82
NBPF3-203ENST00000342104 EIF4G1Q04637 1599 aaKnown RBP20.19■□□□□ 0.82
NBPF3-203ENST00000342104 TRIM26Q12899 539 aaPredicted RBP20.14■□□□□ 0.81
NBPF3-203ENST00000342104 ABCC8Q09428 1581 aa20.11■□□□□ 0.81
NBPF3-203ENST00000342104 PEG3Q9GZU2 1588 aa20.08■□□□□ 0.81
NBPF3-203ENST00000342104 ATAD2BQ9ULI0 1458 aa20.06■□□□□ 0.8
NBPF3-203ENST00000342104 BAZ1BQ9UIG0 1483 aaKnown RBP20.04■□□□□ 0.8
NBPF3-203ENST00000342104 WRNQ14191 1432 aaPredicted RBP eCLIP19.91■□□□□ 0.78
NBPF3-203ENST00000342104 SOGA1O94964 1423 aa19.89■□□□□ 0.77
NBPF3-203ENST00000342104 EEA1Q15075 1411 aa19.87■□□□□ 0.77
NBPF3-203ENST00000342104 CSRNP3Q8WYN3 585 aa19.86■□□□□ 0.77
NBPF3-203ENST00000342104 UBTFP17480 764 aaKnown RBP19.81■□□□□ 0.76
NBPF3-203ENST00000342104 PPARGC1BQ86YN6 1023 aaKnown RBP19.79■□□□□ 0.76
NBPF3-203ENST00000342104 RUSC2Q8N2Y8 1516 aa19.76■□□□□ 0.75
NBPF3-203ENST00000342104 NCAPD3P42695 1498 aa19.73■□□□□ 0.75
NBPF3-203ENST00000342104 TNIKQ9UKE5 1360 aa19.72■□□□□ 0.75
NBPF3-203ENST00000342104 SYNJ1O43426 1573 aa19.72■□□□□ 0.75
NBPF3-203ENST00000342104 CEP162Q5TB80 1403 aa19.71■□□□□ 0.75
NBPF3-203ENST00000342104 HMGXB3Q12766 1538 aa19.7■□□□□ 0.74
NBPF3-203ENST00000342104 GOLGA3Q08378 1498 aa19.68■□□□□ 0.74
NBPF3-203ENST00000342104 ZEB1P37275 1124 aaPredicted RBP19.65■□□□□ 0.74
NBPF3-203ENST00000342104 CEP164Q9UPV0 1460 aa19.6■□□□□ 0.73
NBPF3-203ENST00000342104 TTBK1Q5TCY1 1321 aaPredicted RBP19.6■□□□□ 0.73
NBPF3-203ENST00000342104 TOP2BQ02880 1626 aa19.53■□□□□ 0.72
NBPF3-203ENST00000342104 KIF21BO75037 1637 aa19.5■□□□□ 0.71
NBPF3-203ENST00000342104 CFTRP13569 1480 aa19.48■□□□□ 0.71
NBPF3-203ENST00000342104 RANGAP1P46060 587 aaPredicted RBP19.46■□□□□ 0.71
NBPF3-203ENST00000342104 CLIP1P30622 1438 aa19.45■□□□□ 0.7
NBPF3-203ENST00000342104 BIVM-ERCC5R4GMW8 1640 aa19.45■□□□□ 0.7
NBPF3-203ENST00000342104 RAPGEF2Q9Y4G8 1499 aa19.43■□□□□ 0.7
NBPF3-203ENST00000342104 CUX1P39880 1505 aa19.4■□□□□ 0.7
NBPF3-203ENST00000342104 APLP2Q06481 763 aa19.39■□□□□ 0.69
NBPF3-203ENST00000342104 CCER1Q8TC90 406 aaPredicted RBP19.38■□□□□ 0.69
NBPF3-203ENST00000342104 CADPSQ9ULU8 1353 aa19.37■□□□□ 0.69
NBPF3-203ENST00000342104 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.36■□□□□ 0.69
NBPF3-203ENST00000342104 KIF27Q86VH2 1401 aa19.36■□□□□ 0.69
NBPF3-203ENST00000342104 CC2D2AQ9P2K1 1620 aa19.35■□□□□ 0.69
NBPF3-203ENST00000342104 VPS8Q8N3P4 1428 aa19.3■□□□□ 0.68
NBPF3-203ENST00000342104 PRXQ9BXM0 1461 aa19.28■□□□□ 0.68
NBPF3-203ENST00000342104 ERICH3Q5RHP9 1530 aa19.27■□□□□ 0.68
NBPF3-203ENST00000342104 PRDM2Q13029 1718 aa19.23■□□□□ 0.67
NBPF3-203ENST00000342104 CUX2O14529 1486 aa19.21■□□□□ 0.67
NBPF3-203ENST00000342104 FANCD2Q9BXW9 1451 aa19.16■□□□□ 0.66
NBPF3-203ENST00000342104 FGD5Q6ZNL6 1462 aa19.15■□□□□ 0.66
NBPF3-203ENST00000342104 HNRNPUL2Q1KMD3 747 aaKnown RBP19.15■□□□□ 0.66
NBPF3-203ENST00000342104 IGF1RP08069 1367 aa19.1■□□□□ 0.65
NBPF3-203ENST00000342104 CARMIL1Q5VZK9 1371 aa19.08■□□□□ 0.64
NBPF3-203ENST00000342104 ARAP1Q96P48 1450 aa19.08■□□□□ 0.64
NBPF3-203ENST00000342104 NESP48681 1621 aa19.05■□□□□ 0.64
NBPF3-203ENST00000342104 DNMBPQ6XZF7 1577 aa19.01■□□□□ 0.63
NBPF3-203ENST00000342104 TOPBP1Q92547 1522 aa18.98■□□□□ 0.63
NBPF3-203ENST00000342104 ARHGAP35Q9NRY4 1499 aa18.98■□□□□ 0.63
NBPF3-203ENST00000342104 RAD54L2Q9Y4B4 1467 aa18.97■□□□□ 0.63
NBPF3-203ENST00000342104 KANK4Q5T7N3 995 aaPredicted RBP18.96■□□□□ 0.63
NBPF3-203ENST00000342104 POLA1P09884 1462 aaPredicted RBP18.95■□□□□ 0.62
NBPF3-203ENST00000342104 LAMC3Q9Y6N6 1575 aa18.94■□□□□ 0.62
NBPF3-203ENST00000342104 ABCA10Q8WWZ4 1543 aa18.92■□□□□ 0.62
NBPF3-203ENST00000342104 PDS5BQ9NTI5 1447 aa18.91■□□□□ 0.62
NBPF3-203ENST00000342104 DNAJC5BQ9UF47 199 aa18.88■□□□□ 0.61
NBPF3-203ENST00000342104 P3H3Q8IVL6 736 aa18.87■□□□□ 0.61
NBPF3-203ENST00000342104 ATP1B4Q9UN42 357 aaPredicted RBP18.86■□□□□ 0.61
NBPF3-203ENST00000342104 URB2Q14146 1524 aaKnown RBP18.85■□□□□ 0.61
NBPF3-203ENST00000342104 FHAD1B1AJZ9 1412 aa18.81■□□□□ 0.6
NBPF3-203ENST00000342104 TDRD9Q8NDG6 1382 aaKnown RBP18.81■□□□□ 0.6
NBPF3-203ENST00000342104 ITGAEP38570 1179 aa18.78■□□□□ 0.6
NBPF3-203ENST00000342104 CCNB3Q8WWL7 1395 aa18.78■□□□□ 0.6
NBPF3-203ENST00000342104 DIEXFQ68CQ4 756 aaKnown RBP18.77■□□□□ 0.6
NBPF3-203ENST00000342104 CUL7Q14999 1698 aa18.77■□□□□ 0.6
NBPF3-203ENST00000342104 RRBP1Q9P2E9 1410 aaKnown RBP18.77■□□□□ 0.59
NBPF3-203ENST00000342104 FHOD3Q2V2M9 1422 aa18.74■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 48.5 ms