Protein–RNA interactions for Protein: P49759

CLK1, Dual specificity protein kinase CLK1, humanhuman

Known RBP Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1P49759 LY6E-208ENST00000520531 490 ntTSL 2 BASIC12.3□□□□□ -0.44
CLK1P49759 EIF1AD-211ENST00000533544 965 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
CLK1P49759 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC12.3□□□□□ -0.44
CLK1P49759 TMEM202-AS1-201ENST00000562573 723 ntTSL 3 BASIC12.3□□□□□ -0.44
CLK1P49759 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC12.3□□□□□ -0.44
CLK1P49759 SRD5A3-AS1-211ENST00000599135 737 ntTSL 5 BASIC12.3□□□□□ -0.44
CLK1P49759 NR2F2-AS1-215ENST00000620029 1223 ntTSL 5 BASIC12.3□□□□□ -0.44
CLK1P49759 SNX12-206ENST00000622259 661 ntTSL 5 BASIC12.3□□□□□ -0.44
CLK1P49759 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC12.3□□□□□ -0.44
CLK1P49759 AC011491.1-203ENST00000637688 543 ntBASIC12.3□□□□□ -0.44
CLK1P49759 SLCO2A1-208ENST00000493729 1918 ntTSL 5 BASIC12.3□□□□□ -0.44
CLK1P49759 SHROOM2P1-201ENST00000434773 2384 ntBASIC12.3□□□□□ -0.44
CLK1P49759 EGR3-201ENST00000317216 4336 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
CLK1P49759 SLC22A6-202ENST00000377871 2151 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CLK1P49759 SELENBP1-208ENST00000447402 1530 ntTSL 2 BASIC12.3□□□□□ -0.44
CLK1P49759 AL162231.4-201ENST00000564224 3264 ntTSL 2 BASIC12.3□□□□□ -0.44
CLK1P49759 AL391845.2-201ENST00000443930 1954 ntTSL 2 BASIC12.3□□□□□ -0.44
CLK1P49759 CTAGE7P-201ENST00000435712 2436 ntBASIC12.3□□□□□ -0.44
CLK1P49759 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC12.3□□□□□ -0.44
CLK1P49759 PCDHGB8P-202ENST00000507007 2873 ntBASIC12.3□□□□□ -0.44
CLK1P49759 TIAF1-201ENST00000359450 5337 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
CLK1P49759 TMEM182-202ENST00000409528 3112 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
CLK1P49759 IFFO1-205ENST00000436152 3101 ntTSL 2 BASIC12.3□□□□□ -0.44
CLK1P49759 PDHA1-213ENST00000545074 3391 ntAPPRIS ALT1 TSL 2 BASIC12.3□□□□□ -0.44
CLK1P49759 SEPT9-204ENST00000427180 3635 ntTSL 2 BASIC12.3□□□□□ -0.44
CLK1P49759 TNIP1-201ENST00000315050 2785 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
CLK1P49759 GOLGA8A-201ENST00000359187 1877 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLK1P49759 TEX13D-201ENST00000632372 4203 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
CLK1P49759 SHOX-203ENST00000381578 3757 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CLK1P49759 ALS2CL-201ENST00000318962 4741 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLK1P49759 LRRC8E-201ENST00000306708 3595 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLK1P49759 ARHGEF4-212ENST00000525839 3828 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLK1P49759 RMND5B-212ENST00000542098 1681 ntTSL 5 BASIC12.29□□□□□ -0.44
CLK1P49759 ASAP3-201ENST00000336689 4050 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLK1P49759 ALG6-202ENST00000371108 3371 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLK1P49759 PISD-202ENST00000382151 2669 ntAPPRIS P2 TSL 5 BASIC12.29□□□□□ -0.44
CLK1P49759 SNIP1-201ENST00000296215 4605 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLK1P49759 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLK1P49759 RAB3IP-201ENST00000247833 3690 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLK1P49759 IRS4-201ENST00000372129 3928 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
CLK1P49759 PHTF2-204ENST00000415251 1738 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CLK1P49759 NCBP2L-202ENST00000639756 1953 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CLK1P49759 CRBN-215ENST00000639284 2223 ntTSL 5 BASIC12.29□□□□□ -0.44
CLK1P49759 POFUT2-213ENST00000612472 2959 ntTSL 5 BASIC12.29□□□□□ -0.44
CLK1P49759 CADM3-202ENST00000368125 3745 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLK1P49759 IKZF4-201ENST00000262032 5229 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CLK1P49759 SLIT2-202ENST00000503823 5233 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CLK1P49759 PEX5-201ENST00000266563 3252 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CLK1P49759 ARRDC3-AS1-201ENST00000625713 2500 ntTSL 2 BASIC12.29□□□□□ -0.44
CLK1P49759 UPK1A-201ENST00000222275 1223 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLK1P49759 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLK1P49759 SPIN2B-203ENST00000374910 725 ntTSL 3 BASIC12.29□□□□□ -0.44
CLK1P49759 PPIL3-205ENST00000409449 756 ntTSL 5 BASIC12.29□□□□□ -0.44
CLK1P49759 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLK1P49759 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC12.29□□□□□ -0.44
CLK1P49759 AC078991.1-201ENST00000437297 610 ntBASIC12.29□□□□□ -0.44
CLK1P49759 DLEU2-205ENST00000443587 705 ntTSL 5 BASIC12.29□□□□□ -0.44
CLK1P49759 SMIM23-202ENST00000523047 573 ntAPPRIS P5 TSL 2 BASIC12.29□□□□□ -0.44
CLK1P49759 CD44-224ENST00000526669 870 ntTSL 5 BASIC12.29□□□□□ -0.44
CLK1P49759 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
CLK1P49759 DNM1P51-201ENST00000558149 522 ntBASIC12.29□□□□□ -0.44
CLK1P49759 CCNB2-203ENST00000559622 1064 ntTSL 5 BASIC12.29□□□□□ -0.44
CLK1P49759 LINC01584-201ENST00000562495 676 ntTSL 5 BASIC12.29□□□□□ -0.44
CLK1P49759 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLK1P49759 ZNF530-203ENST00000597864 634 ntTSL 2 BASIC12.29□□□□□ -0.44
CLK1P49759 HIST1H3F-201ENST00000618052 411 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
CLK1P49759 DPY19L1-201ENST00000310974 4870 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLK1P49759 INTS8-217ENST00000523731 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLK1P49759 ATAT1-202ENST00000319027 2061 ntTSL 2 BASIC12.29□□□□□ -0.44
CLK1P49759 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC12.29□□□□□ -0.44
CLK1P49759 RBM22P2-201ENST00000393978 1814 ntBASIC12.29□□□□□ -0.44
CLK1P49759 CLDN19-201ENST00000296387 2859 ntTSL 2 BASIC12.29□□□□□ -0.44
CLK1P49759 TRPV1-204ENST00000425167 2607 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CLK1P49759 FNBP4-201ENST00000263773 3972 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLK1P49759 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CLK1P49759 EPS8L3-201ENST00000361852 2130 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CLK1P49759 LHX6-204ENST00000394319 3465 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLK1P49759 GPATCH2L-202ENST00000312858 2438 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
CLK1P49759 DUSP4-202ENST00000240101 2959 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CLK1P49759 RIMKLA-202ENST00000431473 8909 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLK1P49759 AC006144.1-201ENST00000424220 1600 ntBASIC12.29□□□□□ -0.44
CLK1P49759 CFAP65-204ENST00000410037 2703 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
CLK1P49759 FPGT-202ENST00000370898 3254 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLK1P49759 KRT8P42-201ENST00000405771 1399 ntBASIC12.29□□□□□ -0.44
CLK1P49759 ST3GAL5-204ENST00000393808 2236 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
CLK1P49759 ADCY1-201ENST00000297323 12503 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLK1P49759 ETNPPL-206ENST00000510706 1692 ntTSL 2 BASIC12.29□□□□□ -0.44
CLK1P49759 FOXD2-AS1-201ENST00000445551 2509 ntBASIC12.29□□□□□ -0.44
CLK1P49759 ACSS3-203ENST00000548058 9254 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
CLK1P49759 CORO7-202ENST00000537233 3392 ntTSL 2 BASIC12.29□□□□□ -0.44
CLK1P49759 TLE3-208ENST00000557907 2295 ntAPPRIS ALT1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLK1P49759 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLK1P49759 SEC24B-202ENST00000399100 3780 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLK1P49759 MSL3-207ENST00000398527 2324 ntTSL 2 BASIC12.28□□□□□ -0.44
CLK1P49759 CLEC20A-202ENST00000623247 1491 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
CLK1P49759 EDEM2-201ENST00000374491 1756 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
CLK1P49759 GPN1-211ENST00000610189 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLK1P49759 RNF34-203ENST00000392465 2051 ntAPPRIS P3 TSL 5 BASIC12.28□□□□□ -0.44
CLK1P49759 THSD1-201ENST00000258613 2962 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
CLK1P49759 NDRG4-204ENST00000394282 3626 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 47.4 ms