RNA–Protein interactions for RNA: ENST00000240101.2

DUSP4-202, Transcript of dual specificity phosphatase 4, humanhuman

TSL 1 (best) BASIC

Gene DUSP4, Length 2,959 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP4-202ENST00000240101 NISCHQ9Y2I1 1504 aa23.81■■□□□ 1.4
DUSP4-202ENST00000240101 HRCP23327 699 aa20.95■□□□□ 0.94
DUSP4-202ENST00000240101 SHROOM4Q9ULL8 1493 aa20.89■□□□□ 0.93
DUSP4-202ENST00000240101 PPARGC1BQ86YN6 1023 aaKnown RBP20.82■□□□□ 0.92
DUSP4-202ENST00000240101 PELP1Q8IZL8 1130 aaKnown RBP20.71■□□□□ 0.91
DUSP4-202ENST00000240101 SUPT5HO00267 1087 aaKnown RBP20.65■□□□□ 0.9
DUSP4-202ENST00000240101 PCGF6Q9BYE7 350 aa20.58■□□□□ 0.88
DUSP4-202ENST00000240101 SCAF1Q9H7N4 1312 aaKnown RBP20.2■□□□□ 0.82
DUSP4-202ENST00000240101 ZCCHC6Q5VYS8 1495 aaKnown RBP20.18■□□□□ 0.82
DUSP4-202ENST00000240101 MYO15BQ96JP2 1530 aa20.18■□□□□ 0.82
DUSP4-202ENST00000240101 CHIC1Q5VXU3 224 aa20.14■□□□□ 0.81
DUSP4-202ENST00000240101 DCAF8L2P0C7V8 631 aa20.01■□□□□ 0.79
DUSP4-202ENST00000240101 MYT1Q01538 1121 aa19.95■□□□□ 0.78
DUSP4-202ENST00000240101 CCDC180Q9P1Z9 1646 aa19.91■□□□□ 0.78
DUSP4-202ENST00000240101 LOC105371045A0A1W2PR82 267 aa19.7■□□□□ 0.74
DUSP4-202ENST00000240101 DCAF1Q9Y4B6 1507 aa19.54■□□□□ 0.72
DUSP4-202ENST00000240101 TRIM26Q12899 539 aaPredicted RBP19.53■□□□□ 0.72
DUSP4-202ENST00000240101 NEUROD1Q13562 356 aa19.52■□□□□ 0.71
DUSP4-202ENST00000240101 GTF3C3Q9Y5Q9 886 aa19.5■□□□□ 0.71
DUSP4-202ENST00000240101 ACIN1Q9UKV3 1341 aaKnown RBP19.48■□□□□ 0.71
DUSP4-202ENST00000240101 ZEB1P37275 1124 aaPredicted RBP19.4■□□□□ 0.7
DUSP4-202ENST00000240101 CENPBP07199 599 aaPredicted RBP19.19■□□□□ 0.66
DUSP4-202ENST00000240101 FAM9AQ8IZU1 332 aaPredicted RBP19.12■□□□□ 0.65
DUSP4-202ENST00000240101 TRIM41Q8WV44 630 aa19.1■□□□□ 0.65
DUSP4-202ENST00000240101 ABCC9O60706 1549 aa19.1■□□□□ 0.65
DUSP4-202ENST00000240101 EHMT2Q96KQ7 1210 aa19.08■□□□□ 0.64
DUSP4-202ENST00000240101 RSF1Q96T23 1441 aaPredicted RBP19.06■□□□□ 0.64
DUSP4-202ENST00000240101 YTHDC1Q96MU7 727 aaKnown RBP19.03■□□□□ 0.64
DUSP4-202ENST00000240101 DIEXFQ68CQ4 756 aaKnown RBP18.99■□□□□ 0.63
DUSP4-202ENST00000240101 SCRIBQ14160 1630 aa18.98■□□□□ 0.63
DUSP4-202ENST00000240101 BCL11AQ9H165 835 aa18.96■□□□□ 0.63
DUSP4-202ENST00000240101 RB1CC1Q8TDY2 1594 aa18.93■□□□□ 0.62
DUSP4-202ENST00000240101 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.92■□□□□ 0.62
DUSP4-202ENST00000240101 CCER1Q8TC90 406 aaPredicted RBP18.85■□□□□ 0.61
DUSP4-202ENST00000240101 TTBK1Q5TCY1 1321 aaPredicted RBP18.72■□□□□ 0.59
DUSP4-202ENST00000240101 CECR2Q9BXF3 1484 aa18.69■□□□□ 0.58
DUSP4-202ENST00000240101 MROH2BQ7Z745 1585 aa18.61■□□□□ 0.57
DUSP4-202ENST00000240101 ANP32EQ9BTT0 268 aa18.6■□□□□ 0.57
DUSP4-202ENST00000240101 CSRNP3Q8WYN3 585 aa18.54■□□□□ 0.56
DUSP4-202ENST00000240101 WIZO95785 1651 aa18.54■□□□□ 0.56
DUSP4-202ENST00000240101 MIER1Q8N108 512 aa18.5■□□□□ 0.55
DUSP4-202ENST00000240101 PRKCSHP14314 528 aaPredicted RBP18.49■□□□□ 0.55
DUSP4-202ENST00000240101 ZNF316A6NFI3 1004 aaPredicted RBP18.42■□□□□ 0.54
DUSP4-202ENST00000240101 NACADO15069 1562 aa18.38■□□□□ 0.53
DUSP4-202ENST00000240101 TSHZ2Q9NRE2 1034 aa18.38■□□□□ 0.53
DUSP4-202ENST00000240101 SUPT16HQ9Y5B9 1047 aaKnown RBP18.33■□□□□ 0.53
DUSP4-202ENST00000240101 BAZ1AQ9NRL2 1556 aaPredicted RBP18.32■□□□□ 0.52
DUSP4-202ENST00000240101 EIF4G1Q04637 1599 aaKnown RBP18.32■□□□□ 0.52
DUSP4-202ENST00000240101 ABCC8Q09428 1581 aa18.31■□□□□ 0.52
DUSP4-202ENST00000240101 CCDC88BA6NC98 1476 aa18.3■□□□□ 0.52
DUSP4-202ENST00000240101 CEP162Q5TB80 1403 aa18.26■□□□□ 0.51
DUSP4-202ENST00000240101 SOGA1O94964 1423 aa18.23■□□□□ 0.51
DUSP4-202ENST00000240101 WRNQ14191 1432 aaPredicted RBP eCLIP18.23■□□□□ 0.51
DUSP4-202ENST00000240101 BCANQ96GW7 911 aa18.2■□□□□ 0.5
DUSP4-202ENST00000240101 UBTFP17480 764 aaKnown RBP18.18■□□□□ 0.5
DUSP4-202ENST00000240101 RUSC2Q8N2Y8 1516 aa18.15■□□□□ 0.5
DUSP4-202ENST00000240101 TNIKQ9UKE5 1360 aa18.14■□□□□ 0.49
DUSP4-202ENST00000240101 TOP2AP11388 1531 aaKnown RBP18.13■□□□□ 0.49
DUSP4-202ENST00000240101 SMARCA2P51531 1590 aa18.09■□□□□ 0.49
DUSP4-202ENST00000240101 HNRNPUL2Q1KMD3 747 aaKnown RBP18.05■□□□□ 0.48
DUSP4-202ENST00000240101 SMARCA4P51532 1647 aa18.05■□□□□ 0.48
DUSP4-202ENST00000240101 EEA1Q15075 1411 aa17.97■□□□□ 0.47
DUSP4-202ENST00000240101 GOLGA3Q08378 1498 aa17.96■□□□□ 0.47
DUSP4-202ENST00000240101 RBM19Q9Y4C8 960 aaKnown RBP17.93■□□□□ 0.46
DUSP4-202ENST00000240101 CLSPNQ9HAW4 1339 aa17.91■□□□□ 0.46
DUSP4-202ENST00000240101 RANGAP1P46060 587 aaPredicted RBP17.9■□□□□ 0.46
DUSP4-202ENST00000240101 ERICH6Q7L0X2 663 aa17.89■□□□□ 0.45
DUSP4-202ENST00000240101 FKBP8Q14318 412 aa17.88■□□□□ 0.45
DUSP4-202ENST00000240101 ITGAEP38570 1179 aa17.87■□□□□ 0.45
DUSP4-202ENST00000240101 ANO8Q9HCE9 1232 aaPredicted RBP17.86■□□□□ 0.45
DUSP4-202ENST00000240101 UNC13AQ9UPW8 1703 aa17.85■□□□□ 0.45
DUSP4-202ENST00000240101 PABPN1Q86U42 306 aaKnown RBP eCLIP17.85■□□□□ 0.45
DUSP4-202ENST00000240101 CLIP1P30622 1438 aa17.83■□□□□ 0.45
DUSP4-202ENST00000240101 MSH5O43196 834 aa17.82■□□□□ 0.44
DUSP4-202ENST00000240101 CEP164Q9UPV0 1460 aa17.8■□□□□ 0.44
DUSP4-202ENST00000240101 APLP2Q06481 763 aa17.79■□□□□ 0.44
DUSP4-202ENST00000240101 KCNH8Q96L42 1107 aa17.79■□□□□ 0.44
DUSP4-202ENST00000240101 SYNJ1O43426 1573 aa17.78■□□□□ 0.44
DUSP4-202ENST00000240101 VPS8Q8N3P4 1428 aa17.76■□□□□ 0.43
DUSP4-202ENST00000240101 KIF21BO75037 1637 aa17.73■□□□□ 0.43
DUSP4-202ENST00000240101 RAPGEF2Q9Y4G8 1499 aa17.73■□□□□ 0.43
DUSP4-202ENST00000240101 DEKP35659 375 aaKnown RBP17.67■□□□□ 0.42
DUSP4-202ENST00000240101 CCDC136Q96JN2 1154 aa17.66■□□□□ 0.42
DUSP4-202ENST00000240101 NEFLP07196 543 aa17.66■□□□□ 0.42
DUSP4-202ENST00000240101 BAZ1BQ9UIG0 1483 aaKnown RBP17.62■□□□□ 0.41
DUSP4-202ENST00000240101 BICRAQ9NZM4 1560 aa17.62■□□□□ 0.41
DUSP4-202ENST00000240101 SALL2Q9Y467 1007 aaPredicted RBP17.61■□□□□ 0.41
DUSP4-202ENST00000240101 DHX57Q6P158 1386 aaKnown RBP17.6■□□□□ 0.41
DUSP4-202ENST00000240101 KANK4Q5T7N3 995 aaPredicted RBP17.59■□□□□ 0.41
DUSP4-202ENST00000240101 PEG3Q9GZU2 1588 aa17.58■□□□□ 0.4
DUSP4-202ENST00000240101 NBR1Q14596 966 aa17.54■□□□□ 0.4
DUSP4-202ENST00000240101 ATAD2BQ9ULI0 1458 aa17.54■□□□□ 0.4
DUSP4-202ENST00000240101 TRIM52Q96A61 297 aa17.52■□□□□ 0.4
DUSP4-202ENST00000240101 RTN4Q9NQC3 1192 aaKnown RBP17.5■□□□□ 0.39
DUSP4-202ENST00000240101 ZBTB4Q9P1Z0 1013 aaPredicted RBP17.49■□□□□ 0.39
DUSP4-202ENST00000240101 ARAP1Q96P48 1450 aa17.48■□□□□ 0.39
DUSP4-202ENST00000240101 IRX6P78412 446 aaPredicted RBP17.48■□□□□ 0.39
DUSP4-202ENST00000240101 TOP2BQ02880 1626 aa17.45■□□□□ 0.38
DUSP4-202ENST00000240101 CDK11AQ9UQ88 783 aaPredicted RBP17.43■□□□□ 0.38
DUSP4-202ENST00000240101 PRXQ9BXM0 1461 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms