RNA–Protein interactions for RNA: ENST00000525839.6

ARHGEF4-212, Transcript of Rho guanine nucleotide exchange factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF4, Length 3,828 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF4-212ENST00000525839 NISCHQ9Y2I1 1504 aa23.45■■□□□ 1.34
ARHGEF4-212ENST00000525839 HRCP23327 699 aa21.1■□□□□ 0.97
ARHGEF4-212ENST00000525839 SHROOM4Q9ULL8 1493 aa20.71■□□□□ 0.91
ARHGEF4-212ENST00000525839 SUPT5HO00267 1087 aaKnown RBP20.66■□□□□ 0.9
ARHGEF4-212ENST00000525839 PPARGC1BQ86YN6 1023 aaKnown RBP20.6■□□□□ 0.89
ARHGEF4-212ENST00000525839 PCGF6Q9BYE7 350 aa20.6■□□□□ 0.89
ARHGEF4-212ENST00000525839 MYO15BQ96JP2 1530 aa20.55■□□□□ 0.88
ARHGEF4-212ENST00000525839 PELP1Q8IZL8 1130 aaKnown RBP20.44■□□□□ 0.86
ARHGEF4-212ENST00000525839 CHIC1Q5VXU3 224 aa20.41■□□□□ 0.86
ARHGEF4-212ENST00000525839 DCAF1Q9Y4B6 1507 aa20.19■□□□□ 0.82
ARHGEF4-212ENST00000525839 ZCCHC6Q5VYS8 1495 aaKnown RBP19.98■□□□□ 0.79
ARHGEF4-212ENST00000525839 TRIM26Q12899 539 aaPredicted RBP19.97■□□□□ 0.79
ARHGEF4-212ENST00000525839 SCAF1Q9H7N4 1312 aaKnown RBP19.96■□□□□ 0.79
ARHGEF4-212ENST00000525839 CCDC180Q9P1Z9 1646 aa19.94■□□□□ 0.78
ARHGEF4-212ENST00000525839 LOC105371045A0A1W2PR82 267 aa19.9■□□□□ 0.78
ARHGEF4-212ENST00000525839 ZEB1P37275 1124 aaPredicted RBP19.85■□□□□ 0.77
ARHGEF4-212ENST00000525839 MYT1Q01538 1121 aa19.67■□□□□ 0.74
ARHGEF4-212ENST00000525839 ACIN1Q9UKV3 1341 aaKnown RBP19.48■□□□□ 0.71
ARHGEF4-212ENST00000525839 NEUROD1Q13562 356 aa19.4■□□□□ 0.7
ARHGEF4-212ENST00000525839 DCAF8L2P0C7V8 631 aa19.39■□□□□ 0.69
ARHGEF4-212ENST00000525839 GTF3C3Q9Y5Q9 886 aa19.29■□□□□ 0.68
ARHGEF4-212ENST00000525839 CENPBP07199 599 aaPredicted RBP19.22■□□□□ 0.67
ARHGEF4-212ENST00000525839 TRIM41Q8WV44 630 aa19.13■□□□□ 0.65
ARHGEF4-212ENST00000525839 DIEXFQ68CQ4 756 aaKnown RBP19.11■□□□□ 0.65
ARHGEF4-212ENST00000525839 FAM9AQ8IZU1 332 aaPredicted RBP19.08■□□□□ 0.65
ARHGEF4-212ENST00000525839 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.07■□□□□ 0.64
ARHGEF4-212ENST00000525839 CCER1Q8TC90 406 aaPredicted RBP19.05■□□□□ 0.64
ARHGEF4-212ENST00000525839 ABCC9O60706 1549 aa19■□□□□ 0.63
ARHGEF4-212ENST00000525839 EHMT2Q96KQ7 1210 aa18.96■□□□□ 0.63
ARHGEF4-212ENST00000525839 RSF1Q96T23 1441 aaPredicted RBP18.9■□□□□ 0.62
ARHGEF4-212ENST00000525839 RB1CC1Q8TDY2 1594 aa18.81■□□□□ 0.6
ARHGEF4-212ENST00000525839 YTHDC1Q96MU7 727 aaKnown RBP18.75■□□□□ 0.59
ARHGEF4-212ENST00000525839 ZNF316A6NFI3 1004 aaPredicted RBP18.75■□□□□ 0.59
ARHGEF4-212ENST00000525839 MIER1Q8N108 512 aa18.61■□□□□ 0.57
ARHGEF4-212ENST00000525839 WRNQ14191 1432 aaPredicted RBP eCLIP18.56■□□□□ 0.56
ARHGEF4-212ENST00000525839 TTBK1Q5TCY1 1321 aaPredicted RBP18.54■□□□□ 0.56
ARHGEF4-212ENST00000525839 SCRIBQ14160 1630 aa18.53■□□□□ 0.56
ARHGEF4-212ENST00000525839 CEP162Q5TB80 1403 aa18.4■□□□□ 0.54
ARHGEF4-212ENST00000525839 CLSPNQ9HAW4 1339 aa18.4■□□□□ 0.54
ARHGEF4-212ENST00000525839 ANP32EQ9BTT0 268 aa18.38■□□□□ 0.53
ARHGEF4-212ENST00000525839 SUPT16HQ9Y5B9 1047 aaKnown RBP18.38■□□□□ 0.53
ARHGEF4-212ENST00000525839 BCL11AQ9H165 835 aa18.35■□□□□ 0.53
ARHGEF4-212ENST00000525839 CECR2Q9BXF3 1484 aa18.32■□□□□ 0.52
ARHGEF4-212ENST00000525839 TSHZ2Q9NRE2 1034 aa18.31■□□□□ 0.52
ARHGEF4-212ENST00000525839 MROH2BQ7Z745 1585 aa18.31■□□□□ 0.52
ARHGEF4-212ENST00000525839 EIF4G1Q04637 1599 aaKnown RBP18.3■□□□□ 0.52
ARHGEF4-212ENST00000525839 TNIKQ9UKE5 1360 aa18.3■□□□□ 0.52
ARHGEF4-212ENST00000525839 WIZO95785 1651 aa18.25■□□□□ 0.51
ARHGEF4-212ENST00000525839 HNRNPUL2Q1KMD3 747 aaKnown RBP18.22■□□□□ 0.51
ARHGEF4-212ENST00000525839 CCDC88BA6NC98 1476 aa18.21■□□□□ 0.51
ARHGEF4-212ENST00000525839 CSRNP3Q8WYN3 585 aa18.16■□□□□ 0.5
ARHGEF4-212ENST00000525839 ABCC8Q09428 1581 aa18.15■□□□□ 0.5
ARHGEF4-212ENST00000525839 BAZ1AQ9NRL2 1556 aaPredicted RBP18.15■□□□□ 0.5
ARHGEF4-212ENST00000525839 SOGA1O94964 1423 aa18.15■□□□□ 0.5
ARHGEF4-212ENST00000525839 UBTFP17480 764 aaKnown RBP18.13■□□□□ 0.49
ARHGEF4-212ENST00000525839 EEA1Q15075 1411 aa18.09■□□□□ 0.49
ARHGEF4-212ENST00000525839 GOLGA3Q08378 1498 aa18.05■□□□□ 0.48
ARHGEF4-212ENST00000525839 RUSC2Q8N2Y8 1516 aa18.03■□□□□ 0.48
ARHGEF4-212ENST00000525839 NACADO15069 1562 aa17.98■□□□□ 0.47
ARHGEF4-212ENST00000525839 DHX57Q6P158 1386 aaKnown RBP17.93■□□□□ 0.46
ARHGEF4-212ENST00000525839 BCANQ96GW7 911 aa17.92■□□□□ 0.46
ARHGEF4-212ENST00000525839 TOP2AP11388 1531 aaKnown RBP17.92■□□□□ 0.46
ARHGEF4-212ENST00000525839 VPS8Q8N3P4 1428 aa17.9■□□□□ 0.46
ARHGEF4-212ENST00000525839 CLIP1P30622 1438 aa17.89■□□□□ 0.46
ARHGEF4-212ENST00000525839 APLP2Q06481 763 aa17.88■□□□□ 0.45
ARHGEF4-212ENST00000525839 SMARCA2P51531 1590 aa17.87■□□□□ 0.45
ARHGEF4-212ENST00000525839 RBM19Q9Y4C8 960 aaKnown RBP17.87■□□□□ 0.45
ARHGEF4-212ENST00000525839 FKBP8Q14318 412 aa17.86■□□□□ 0.45
ARHGEF4-212ENST00000525839 KCNH8Q96L42 1107 aa17.85■□□□□ 0.45
ARHGEF4-212ENST00000525839 CEP164Q9UPV0 1460 aa17.85■□□□□ 0.45
ARHGEF4-212ENST00000525839 KIF21BO75037 1637 aa17.81■□□□□ 0.44
ARHGEF4-212ENST00000525839 NEFLP07196 543 aa17.72■□□□□ 0.43
ARHGEF4-212ENST00000525839 MSH5O43196 834 aa17.72■□□□□ 0.43
ARHGEF4-212ENST00000525839 BAZ1BQ9UIG0 1483 aaKnown RBP17.71■□□□□ 0.43
ARHGEF4-212ENST00000525839 SMARCA4P51532 1647 aa17.69■□□□□ 0.42
ARHGEF4-212ENST00000525839 ITGAEP38570 1179 aa17.67■□□□□ 0.42
ARHGEF4-212ENST00000525839 RAPGEF2Q9Y4G8 1499 aa17.65■□□□□ 0.42
ARHGEF4-212ENST00000525839 RANGAP1P46060 587 aaPredicted RBP17.64■□□□□ 0.41
ARHGEF4-212ENST00000525839 CUX2O14529 1486 aa17.62■□□□□ 0.41
ARHGEF4-212ENST00000525839 SYNJ1O43426 1573 aa17.6■□□□□ 0.41
ARHGEF4-212ENST00000525839 FANCIQ9NVI1 1328 aa17.6■□□□□ 0.41
ARHGEF4-212ENST00000525839 RRBP1Q9P2E9 1410 aaKnown RBP17.59■□□□□ 0.41
ARHGEF4-212ENST00000525839 DDX10Q13206 875 aaKnown RBP17.59■□□□□ 0.41
ARHGEF4-212ENST00000525839 KANK4Q5T7N3 995 aaPredicted RBP17.58■□□□□ 0.4
ARHGEF4-212ENST00000525839 PRKCSHP14314 528 aaPredicted RBP17.56■□□□□ 0.4
ARHGEF4-212ENST00000525839 TRIM52Q96A61 297 aa17.55■□□□□ 0.4
ARHGEF4-212ENST00000525839 ERICH6Q7L0X2 663 aa17.54■□□□□ 0.4
ARHGEF4-212ENST00000525839 PPP1R15AO75807 674 aaPredicted RBP17.52■□□□□ 0.4
ARHGEF4-212ENST00000525839 CCER2I3L3R5 266 aa17.52■□□□□ 0.4
ARHGEF4-212ENST00000525839 MAPKBP1O60336 1514 aa17.51■□□□□ 0.39
ARHGEF4-212ENST00000525839 ARAP1Q96P48 1450 aa17.51■□□□□ 0.39
ARHGEF4-212ENST00000525839 CCNB3Q8WWL7 1395 aa17.49■□□□□ 0.39
ARHGEF4-212ENST00000525839 MYT1LQ9UL68 1186 aa17.48■□□□□ 0.39
ARHGEF4-212ENST00000525839 CDK11AQ9UQ88 783 aaPredicted RBP17.47■□□□□ 0.39
ARHGEF4-212ENST00000525839 RAB3GAP2Q9H2M9 1393 aa17.46■□□□□ 0.39
ARHGEF4-212ENST00000525839 WDR97A6NE52 1622 aa17.46■□□□□ 0.39
ARHGEF4-212ENST00000525839 ANP32CO43423 234 aa17.45■□□□□ 0.38
ARHGEF4-212ENST00000525839 DEKP35659 375 aaKnown RBP17.41■□□□□ 0.38
ARHGEF4-212ENST00000525839 ERICH3Q5RHP9 1530 aa17.38■□□□□ 0.37
ARHGEF4-212ENST00000525839 SIN3AQ96ST3 1273 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms