RNA–Protein interactions for RNA: ENST00000317216.2

EGR3-201, Transcript of early growth response 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene EGR3, Length 4,336 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EGR3-201ENST00000317216 NISCHQ9Y2I1 1504 aa26.35■■□□□ 1.81
EGR3-201ENST00000317216 DCAF8L2P0C7V8 631 aa22.83■■□□□ 1.25
EGR3-201ENST00000317216 CCDC180Q9P1Z9 1646 aa22.6■■□□□ 1.21
EGR3-201ENST00000317216 SHROOM4Q9ULL8 1493 aa22.33■■□□□ 1.16
EGR3-201ENST00000317216 ZCCHC6Q5VYS8 1495 aaKnown RBP22.06■■□□□ 1.12
EGR3-201ENST00000317216 ABCC9O60706 1549 aa21.96■■□□□ 1.11
EGR3-201ENST00000317216 SUPT5HO00267 1087 aaKnown RBP21.71■■□□□ 1.07
EGR3-201ENST00000317216 DCAF1Q9Y4B6 1507 aa21.51■■□□□ 1.03
EGR3-201ENST00000317216 SCRIBQ14160 1630 aa21.27■□□□□ 0.99
EGR3-201ENST00000317216 NACADO15069 1562 aa21.25■□□□□ 0.99
EGR3-201ENST00000317216 MYO15BQ96JP2 1530 aa21.16■□□□□ 0.98
EGR3-201ENST00000317216 RB1CC1Q8TDY2 1594 aa21.14■□□□□ 0.97
EGR3-201ENST00000317216 PABPN1Q86U42 306 aaKnown RBP eCLIP20.97■□□□□ 0.95
EGR3-201ENST00000317216 RSF1Q96T23 1441 aaPredicted RBP20.61■□□□□ 0.89
EGR3-201ENST00000317216 CECR2Q9BXF3 1484 aa20.61■□□□□ 0.89
EGR3-201ENST00000317216 CHIC1Q5VXU3 224 aa20.45■□□□□ 0.86
EGR3-201ENST00000317216 MROH2BQ7Z745 1585 aa20.42■□□□□ 0.86
EGR3-201ENST00000317216 BAZ1AQ9NRL2 1556 aaPredicted RBP20.38■□□□□ 0.85
EGR3-201ENST00000317216 UNC13AQ9UPW8 1703 aa20.33■□□□□ 0.84
EGR3-201ENST00000317216 TRIM41Q8WV44 630 aa20.28■□□□□ 0.84
EGR3-201ENST00000317216 BICRAQ9NZM4 1560 aa20.25■□□□□ 0.83
EGR3-201ENST00000317216 WIZO95785 1651 aa20.22■□□□□ 0.83
EGR3-201ENST00000317216 SMARCA4P51532 1647 aa20.16■□□□□ 0.82
EGR3-201ENST00000317216 FAM9AQ8IZU1 332 aaPredicted RBP20.14■□□□□ 0.82
EGR3-201ENST00000317216 EHMT2Q96KQ7 1210 aa20.08■□□□□ 0.8
EGR3-201ENST00000317216 BAZ1BQ9UIG0 1483 aaKnown RBP19.99■□□□□ 0.79
EGR3-201ENST00000317216 TOP2AP11388 1531 aaKnown RBP19.96■□□□□ 0.79
EGR3-201ENST00000317216 ATAD2BQ9ULI0 1458 aa19.94■□□□□ 0.78
EGR3-201ENST00000317216 CCDC88BA6NC98 1476 aa19.92■□□□□ 0.78
EGR3-201ENST00000317216 SMARCA2P51531 1590 aa19.91■□□□□ 0.78
EGR3-201ENST00000317216 LOC105371045A0A1W2PR82 267 aa19.89■□□□□ 0.77
EGR3-201ENST00000317216 EIF4G1Q04637 1599 aaKnown RBP19.84■□□□□ 0.77
EGR3-201ENST00000317216 PEG3Q9GZU2 1588 aa19.67■□□□□ 0.74
EGR3-201ENST00000317216 NCAPD3P42695 1498 aa19.67■□□□□ 0.74
EGR3-201ENST00000317216 ABCC8Q09428 1581 aa19.61■□□□□ 0.73
EGR3-201ENST00000317216 WRNQ14191 1432 aaPredicted RBP eCLIP19.55■□□□□ 0.72
EGR3-201ENST00000317216 UBTFP17480 764 aaKnown RBP19.54■□□□□ 0.72
EGR3-201ENST00000317216 CC2D2AQ9P2K1 1620 aa19.54■□□□□ 0.72
EGR3-201ENST00000317216 HMGXB3Q12766 1538 aa19.53■□□□□ 0.72
EGR3-201ENST00000317216 PELP1Q8IZL8 1130 aaKnown RBP19.51■□□□□ 0.71
EGR3-201ENST00000317216 CSRNP3Q8WYN3 585 aa19.44■□□□□ 0.7
EGR3-201ENST00000317216 RANGAP1P46060 587 aaPredicted RBP19.42■□□□□ 0.7
EGR3-201ENST00000317216 CADPSQ9ULU8 1353 aa19.39■□□□□ 0.69
EGR3-201ENST00000317216 SOGA1O94964 1423 aa19.36■□□□□ 0.69
EGR3-201ENST00000317216 HRCP23327 699 aa19.31■□□□□ 0.68
EGR3-201ENST00000317216 PCGF6Q9BYE7 350 aa19.31■□□□□ 0.68
EGR3-201ENST00000317216 CFTRP13569 1480 aa19.29■□□□□ 0.68
EGR3-201ENST00000317216 DNAJC5BQ9UF47 199 aa19.29■□□□□ 0.68
EGR3-201ENST00000317216 EEA1Q15075 1411 aa19.25■□□□□ 0.67
EGR3-201ENST00000317216 TTBK1Q5TCY1 1321 aaPredicted RBP19.22■□□□□ 0.67
EGR3-201ENST00000317216 PPARGC1BQ86YN6 1023 aaKnown RBP19.22■□□□□ 0.67
EGR3-201ENST00000317216 RUSC2Q8N2Y8 1516 aa19.2■□□□□ 0.66
EGR3-201ENST00000317216 SYNJ1O43426 1573 aa19.2■□□□□ 0.66
EGR3-201ENST00000317216 NESP48681 1621 aa19.17■□□□□ 0.66
EGR3-201ENST00000317216 FANCD2Q9BXW9 1451 aa19.16■□□□□ 0.66
EGR3-201ENST00000317216 APLP2Q06481 763 aa19.13■□□□□ 0.65
EGR3-201ENST00000317216 PDS5BQ9NTI5 1447 aa19.11■□□□□ 0.65
EGR3-201ENST00000317216 KIF27Q86VH2 1401 aa19.1■□□□□ 0.65
EGR3-201ENST00000317216 GOLGA3Q08378 1498 aa19.07■□□□□ 0.64
EGR3-201ENST00000317216 CUX1P39880 1505 aa19.05■□□□□ 0.64
EGR3-201ENST00000317216 TOP2BQ02880 1626 aa19.05■□□□□ 0.64
EGR3-201ENST00000317216 CEP164Q9UPV0 1460 aa19.05■□□□□ 0.64
EGR3-201ENST00000317216 TRIM26Q12899 539 aaPredicted RBP19.04■□□□□ 0.64
EGR3-201ENST00000317216 CUX2O14529 1486 aa19.04■□□□□ 0.64
EGR3-201ENST00000317216 TNIKQ9UKE5 1360 aa19.01■□□□□ 0.63
EGR3-201ENST00000317216 CEP162Q5TB80 1403 aa19■□□□□ 0.63
EGR3-201ENST00000317216 FGD5Q6ZNL6 1462 aa18.97■□□□□ 0.63
EGR3-201ENST00000317216 ERCC6Q03468 1493 aa18.94■□□□□ 0.62
EGR3-201ENST00000317216 LAMC3Q9Y6N6 1575 aa18.94■□□□□ 0.62
EGR3-201ENST00000317216 ATP1B4Q9UN42 357 aaPredicted RBP18.93■□□□□ 0.62
EGR3-201ENST00000317216 RAPGEF2Q9Y4G8 1499 aa18.9■□□□□ 0.62
EGR3-201ENST00000317216 CLIP1P30622 1438 aa18.9■□□□□ 0.62
EGR3-201ENST00000317216 BIVM-ERCC5R4GMW8 1640 aa18.89■□□□□ 0.61
EGR3-201ENST00000317216 MYT1Q01538 1121 aa18.89■□□□□ 0.61
EGR3-201ENST00000317216 RAD54L2Q9Y4B4 1467 aa18.88■□□□□ 0.61
EGR3-201ENST00000317216 TDRD9Q8NDG6 1382 aaKnown RBP18.87■□□□□ 0.61
EGR3-201ENST00000317216 TOPBP1Q92547 1522 aa18.87■□□□□ 0.61
EGR3-201ENST00000317216 CARMIL1Q5VZK9 1371 aa18.86■□□□□ 0.61
EGR3-201ENST00000317216 P3H3Q8IVL6 736 aa18.82■□□□□ 0.6
EGR3-201ENST00000317216 DNMBPQ6XZF7 1577 aa18.82■□□□□ 0.6
EGR3-201ENST00000317216 POLA1P09884 1462 aaPredicted RBP18.81■□□□□ 0.6
EGR3-201ENST00000317216 IGF1RP08069 1367 aa18.81■□□□□ 0.6
EGR3-201ENST00000317216 PRDM2Q13029 1718 aa18.8■□□□□ 0.6
EGR3-201ENST00000317216 FBLN2P98095 1184 aa18.78■□□□□ 0.6
EGR3-201ENST00000317216 URB2Q14146 1524 aaKnown RBP18.76■□□□□ 0.59
EGR3-201ENST00000317216 KIF21BO75037 1637 aa18.76■□□□□ 0.59
EGR3-201ENST00000317216 SCAF1Q9H7N4 1312 aaKnown RBP18.72■□□□□ 0.59
EGR3-201ENST00000317216 PRXQ9BXM0 1461 aa18.72■□□□□ 0.59
EGR3-201ENST00000317216 MRC2Q9UBG0 1479 aa18.7■□□□□ 0.58
EGR3-201ENST00000317216 GAPVD1Q14C86 1478 aa18.66■□□□□ 0.58
EGR3-201ENST00000317216 ABCA10Q8WWZ4 1543 aa18.66■□□□□ 0.58
EGR3-201ENST00000317216 KIF21AQ7Z4S6 1674 aa18.65■□□□□ 0.58
EGR3-201ENST00000317216 ERICH3Q5RHP9 1530 aa18.65■□□□□ 0.58
EGR3-201ENST00000317216 AQRO60306 1485 aaKnown RBP eCLIP18.61■□□□□ 0.57
EGR3-201ENST00000317216 CHMP7Q8WUX9 453 aaPredicted RBP18.61■□□□□ 0.57
EGR3-201ENST00000317216 VPS8Q8N3P4 1428 aa18.61■□□□□ 0.57
EGR3-201ENST00000317216 HNRNPUL2Q1KMD3 747 aaKnown RBP18.59■□□□□ 0.57
EGR3-201ENST00000317216 ZEB1P37275 1124 aaPredicted RBP18.59■□□□□ 0.57
EGR3-201ENST00000317216 CCER1Q8TC90 406 aaPredicted RBP18.56■□□□□ 0.56
EGR3-201ENST00000317216 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.51■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms