Protein–RNA interactions for Protein: Q9Y2L9

LRCH1, Leucine-rich repeat and calponin homology domain-containing protein 1, humanhuman

Predictions only

Length 728 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH1Q9Y2L9 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.85■□□□□ 0.93
LRCH1Q9Y2L9 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC20.85■□□□□ 0.93
LRCH1Q9Y2L9 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
LRCH1Q9Y2L9 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.84■□□□□ 0.93
LRCH1Q9Y2L9 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRCH1Q9Y2L9 SPHK1-210ENST00000592299 1821 ntAPPRIS P3 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRCH1Q9Y2L9 RARRES2P2-201ENST00000394842 485 ntBASIC20.84■□□□□ 0.93
LRCH1Q9Y2L9 AC060814.1-201ENST00000554326 538 ntBASIC20.84■□□□□ 0.93
LRCH1Q9Y2L9 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC20.84■□□□□ 0.93
LRCH1Q9Y2L9 GNB3-201ENST00000229264 1923 ntAPPRIS P3 TSL 5 BASIC20.84■□□□□ 0.93
LRCH1Q9Y2L9 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
LRCH1Q9Y2L9 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC20.84■□□□□ 0.93
LRCH1Q9Y2L9 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LRCH1Q9Y2L9 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LRCH1Q9Y2L9 PHOSPHO1-202ENST00000413580 2173 ntTSL 2 BASIC20.83■□□□□ 0.93
LRCH1Q9Y2L9 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LRCH1Q9Y2L9 HES6-201ENST00000272937 1454 ntAPPRIS P3 TSL 1 (best) BASIC20.83■□□□□ 0.93
LRCH1Q9Y2L9 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LRCH1Q9Y2L9 DAPK3-201ENST00000301264 2105 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.93
LRCH1Q9Y2L9 ARHGEF7-AS2-201ENST00000425094 1239 ntTSL 1 (best) BASIC20.83■□□□□ 0.93
LRCH1Q9Y2L9 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC20.83■□□□□ 0.93
LRCH1Q9Y2L9 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC20.83■□□□□ 0.93
LRCH1Q9Y2L9 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
LRCH1Q9Y2L9 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC20.83■□□□□ 0.92
LRCH1Q9Y2L9 CDKN1C-204ENST00000440480 1811 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
LRCH1Q9Y2L9 SNRK-203ENST00000437827 1995 ntTSL 2 BASIC20.83■□□□□ 0.92
LRCH1Q9Y2L9 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LRCH1Q9Y2L9 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LRCH1Q9Y2L9 ALDOA-221ENST00000566897 2448 ntAPPRIS P2 TSL 2 BASIC20.82■□□□□ 0.92
LRCH1Q9Y2L9 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC20.82■□□□□ 0.92
LRCH1Q9Y2L9 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LRCH1Q9Y2L9 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LRCH1Q9Y2L9 RBAK-202ENST00000396912 6551 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LRCH1Q9Y2L9 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LRCH1Q9Y2L9 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
LRCH1Q9Y2L9 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LRCH1Q9Y2L9 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.82■□□□□ 0.92
LRCH1Q9Y2L9 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
LRCH1Q9Y2L9 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.81■□□□□ 0.92
LRCH1Q9Y2L9 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC20.81■□□□□ 0.92
LRCH1Q9Y2L9 SACM1L-202ENST00000418611 2164 ntTSL 2 BASIC20.81■□□□□ 0.92
LRCH1Q9Y2L9 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
LRCH1Q9Y2L9 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC20.81■□□□□ 0.92
LRCH1Q9Y2L9 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
LRCH1Q9Y2L9 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.81■□□□□ 0.92
LRCH1Q9Y2L9 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
LRCH1Q9Y2L9 TANGO2-207ENST00000420290 1859 ntTSL 2 BASIC20.81■□□□□ 0.92
LRCH1Q9Y2L9 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LRCH1Q9Y2L9 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.8■□□□□ 0.92
LRCH1Q9Y2L9 IRF3-201ENST00000309877 1691 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRCH1Q9Y2L9 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRCH1Q9Y2L9 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRCH1Q9Y2L9 IKBIP-202ENST00000342502 1645 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRCH1Q9Y2L9 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRCH1Q9Y2L9 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LRCH1Q9Y2L9 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRCH1Q9Y2L9 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC20.8■□□□□ 0.92
LRCH1Q9Y2L9 ST3GAL4-215ENST00000532243 1825 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
LRCH1Q9Y2L9 TERF2IP-201ENST00000300086 2118 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
LRCH1Q9Y2L9 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRCH1Q9Y2L9 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRCH1Q9Y2L9 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC20.79■□□□□ 0.92
LRCH1Q9Y2L9 TPTEP1-205ENST00000558085 1738 ntTSL 2 BASIC20.79■□□□□ 0.92
LRCH1Q9Y2L9 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRCH1Q9Y2L9 HSBP1L1-201ENST00000451882 771 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRCH1Q9Y2L9 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC20.79■□□□□ 0.92
LRCH1Q9Y2L9 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
LRCH1Q9Y2L9 ZNF410-206ENST00000540593 1722 ntTSL 2 BASIC20.78■□□□□ 0.92
LRCH1Q9Y2L9 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC20.78■□□□□ 0.92
LRCH1Q9Y2L9 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
LRCH1Q9Y2L9 KCNK12-201ENST00000327876 6227 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRCH1Q9Y2L9 GAS2-202ENST00000454584 2286 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRCH1Q9Y2L9 MATN4-204ENST00000372756 2077 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRCH1Q9Y2L9 PMPCA-203ENST00000399219 1987 ntTSL 2 BASIC20.78■□□□□ 0.92
LRCH1Q9Y2L9 PROCA1-201ENST00000301039 1566 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LRCH1Q9Y2L9 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRCH1Q9Y2L9 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRCH1Q9Y2L9 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
LRCH1Q9Y2L9 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRCH1Q9Y2L9 GLIPR2-203ENST00000396613 1917 ntTSL 4 BASIC20.78■□□□□ 0.92
LRCH1Q9Y2L9 LTB4R-202ENST00000396782 1627 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
LRCH1Q9Y2L9 AP000679.1-202ENST00000319763 2081 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
LRCH1Q9Y2L9 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRCH1Q9Y2L9 AC244015.2-201ENST00000616358 1861 ntBASIC20.77■□□□□ 0.92
LRCH1Q9Y2L9 PQLC3-204ENST00000441908 1784 ntTSL 2 BASIC20.77■□□□□ 0.92
LRCH1Q9Y2L9 GRK4-203ENST00000398052 2202 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRCH1Q9Y2L9 SPEF1-201ENST00000379756 1580 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRCH1Q9Y2L9 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRCH1Q9Y2L9 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC20.77■□□□□ 0.92
LRCH1Q9Y2L9 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRCH1Q9Y2L9 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC20.77■□□□□ 0.92
LRCH1Q9Y2L9 MCCD1-201ENST00000376191 955 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRCH1Q9Y2L9 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRCH1Q9Y2L9 SLC39A3-201ENST00000269740 1502 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
LRCH1Q9Y2L9 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.77■□□□□ 0.92
LRCH1Q9Y2L9 CCDC157-202ENST00000399824 1759 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
LRCH1Q9Y2L9 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRCH1Q9Y2L9 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRCH1Q9Y2L9 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
LRCH1Q9Y2L9 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms