Protein–RNA interactions for Protein: Q9H4I9

SMDT1, Essential MCU regulator, mitochondrial, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1Q9H4I9 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC17.24■□□□□ 0.35
SMDT1Q9H4I9 FAM129C-212ENST00000601861 2180 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
SMDT1Q9H4I9 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMDT1Q9H4I9 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC17.24■□□□□ 0.35
SMDT1Q9H4I9 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMDT1Q9H4I9 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMDT1Q9H4I9 ARID4B-203ENST00000366603 5946 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMDT1Q9H4I9 SMIM3-201ENST00000526627 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
SMDT1Q9H4I9 OXCT2-201ENST00000327582 1826 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
SMDT1Q9H4I9 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMDT1Q9H4I9 ALDH1A3-203ENST00000557963 1670 ntBASIC17.23■□□□□ 0.35
SMDT1Q9H4I9 GFRA3-201ENST00000274721 2039 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMDT1Q9H4I9 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SMDT1Q9H4I9 TSPAN4-203ENST00000397397 1423 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMDT1Q9H4I9 ANKRD19P-205ENST00000473204 2370 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SMDT1Q9H4I9 PAPOLA-225ENST00000557471 1421 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SMDT1Q9H4I9 TOX2-201ENST00000341197 1880 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SMDT1Q9H4I9 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC17.23■□□□□ 0.35
SMDT1Q9H4I9 CXXC5-201ENST00000302517 2658 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMDT1Q9H4I9 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMDT1Q9H4I9 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC17.23■□□□□ 0.35
SMDT1Q9H4I9 RPUSD1-202ENST00000561734 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMDT1Q9H4I9 BICDL2-201ENST00000389347 1811 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMDT1Q9H4I9 FOXO6-202ENST00000641094 1476 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
SMDT1Q9H4I9 MMEL1-206ENST00000502556 1943 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SMDT1Q9H4I9 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.23■□□□□ 0.35
SMDT1Q9H4I9 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SMDT1Q9H4I9 FBXL15-202ENST00000369956 2344 ntAPPRIS ALT1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMDT1Q9H4I9 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMDT1Q9H4I9 HGH1-201ENST00000347708 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMDT1Q9H4I9 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SMDT1Q9H4I9 AVPR2-201ENST00000337474 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMDT1Q9H4I9 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMDT1Q9H4I9 ALKAL1-201ENST00000358543 1217 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMDT1Q9H4I9 MIR3960-201ENST00000583311 91 ntBASIC17.22■□□□□ 0.35
SMDT1Q9H4I9 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMDT1Q9H4I9 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC17.22■□□□□ 0.35
SMDT1Q9H4I9 FEM1AP4-201ENST00000443167 1987 ntBASIC17.22■□□□□ 0.35
SMDT1Q9H4I9 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC17.22■□□□□ 0.35
SMDT1Q9H4I9 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SMDT1Q9H4I9 OSR2-203ENST00000457907 2126 ntTSL 2 BASIC17.21■□□□□ 0.35
SMDT1Q9H4I9 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMDT1Q9H4I9 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC17.21■□□□□ 0.35
SMDT1Q9H4I9 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMDT1Q9H4I9 LINC01006-201ENST00000333319 2292 ntBASIC17.21■□□□□ 0.35
SMDT1Q9H4I9 DNAAF3-201ENST00000391720 2169 ntAPPRIS P3 TSL 2 BASIC17.21■□□□□ 0.35
SMDT1Q9H4I9 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMDT1Q9H4I9 GMDS-202ENST00000380815 1752 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMDT1Q9H4I9 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC17.21■□□□□ 0.35
SMDT1Q9H4I9 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMDT1Q9H4I9 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC17.21■□□□□ 0.35
SMDT1Q9H4I9 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMDT1Q9H4I9 CBX4-202ENST00000448310 718 ntAPPRIS ALT2 TSL 3 BASIC17.21■□□□□ 0.35
SMDT1Q9H4I9 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC17.21■□□□□ 0.35
SMDT1Q9H4I9 MIR3665-201ENST00000578708 105 ntBASIC17.21■□□□□ 0.35
SMDT1Q9H4I9 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMDT1Q9H4I9 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMDT1Q9H4I9 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC17.21■□□□□ 0.35
SMDT1Q9H4I9 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SMDT1Q9H4I9 MAPRE3-203ENST00000405074 1801 ntTSL 3 BASIC17.21■□□□□ 0.35
SMDT1Q9H4I9 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
SMDT1Q9H4I9 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SMDT1Q9H4I9 TMEM260-202ENST00000538838 1638 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SMDT1Q9H4I9 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SMDT1Q9H4I9 TMEM98-202ENST00000394642 1683 ntAPPRIS P1 TSL 2 BASIC17.2■□□□□ 0.34
SMDT1Q9H4I9 GRK3-203ENST00000619906 2873 ntTSL 5 BASIC17.2■□□□□ 0.34
SMDT1Q9H4I9 ST3GAL5-231ENST00000639119 2131 ntTSL 5 BASIC17.2■□□□□ 0.34
SMDT1Q9H4I9 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMDT1Q9H4I9 AC016910.1-201ENST00000422799 1046 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
SMDT1Q9H4I9 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC17.2■□□□□ 0.34
SMDT1Q9H4I9 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC17.2■□□□□ 0.34
SMDT1Q9H4I9 Z98882.1-201ENST00000622160 2253 ntBASIC17.2■□□□□ 0.34
SMDT1Q9H4I9 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMDT1Q9H4I9 AC004691.2-201ENST00000509504 1531 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
SMDT1Q9H4I9 JADE2-204ENST00000402835 2797 ntTSL 5 BASIC17.2■□□□□ 0.34
SMDT1Q9H4I9 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMDT1Q9H4I9 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC17.2■□□□□ 0.34
SMDT1Q9H4I9 AF106564.1-201ENST00000607058 2553 ntBASIC17.2■□□□□ 0.34
SMDT1Q9H4I9 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.2■□□□□ 0.34
SMDT1Q9H4I9 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
SMDT1Q9H4I9 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC17.2■□□□□ 0.34
SMDT1Q9H4I9 SHKBP1-225ENST00000600733 2284 ntTSL 5 BASIC17.19■□□□□ 0.34
SMDT1Q9H4I9 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC17.19■□□□□ 0.34
SMDT1Q9H4I9 KRT18P55-201ENST00000577198 1950 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SMDT1Q9H4I9 TARBP2-201ENST00000266987 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMDT1Q9H4I9 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMDT1Q9H4I9 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMDT1Q9H4I9 KCNK6-201ENST00000263372 5722 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMDT1Q9H4I9 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
SMDT1Q9H4I9 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMDT1Q9H4I9 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMDT1Q9H4I9 WDR38-202ENST00000613760 1323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.19■□□□□ 0.34
SMDT1Q9H4I9 CAMK1-201ENST00000256460 1488 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SMDT1Q9H4I9 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SMDT1Q9H4I9 SETD6-202ENST00000310682 2042 ntAPPRIS P3 TSL 2 BASIC17.18■□□□□ 0.34
SMDT1Q9H4I9 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC17.18■□□□□ 0.34
SMDT1Q9H4I9 TTC34-202ENST00000637179 1775 ntAPPRIS P2 TSL 5 BASIC17.18■□□□□ 0.34
SMDT1Q9H4I9 ATG4D-201ENST00000309469 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
SMDT1Q9H4I9 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
SMDT1Q9H4I9 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC17.18■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 37.3 ms