Protein–RNA interactions for Protein: Q8N6Y1

PCDH20, Protocadherin-20, humanhuman

Known RBP Predictions only

Length 951 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH20Q8N6Y1 DOHH-201ENST00000427575 2031 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDH20Q8N6Y1 AC079834.2-201ENST00000609776 1949 ntBASIC22.43■■□□□ 1.18
PCDH20Q8N6Y1 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
PCDH20Q8N6Y1 PELI3-201ENST00000320740 2740 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
PCDH20Q8N6Y1 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC22.43■■□□□ 1.18
PCDH20Q8N6Y1 SLAIN1-213ENST00000466548 2637 ntAPPRIS ALT2 TSL 5 BASIC22.43■■□□□ 1.18
PCDH20Q8N6Y1 IRF3-207ENST00000593922 1494 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PCDH20Q8N6Y1 KBTBD13-201ENST00000432196 1377 ntAPPRIS P1 BASIC22.42■■□□□ 1.18
PCDH20Q8N6Y1 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PCDH20Q8N6Y1 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
PCDH20Q8N6Y1 PLPP5-201ENST00000419686 794 ntTSL 2 BASIC22.42■■□□□ 1.18
PCDH20Q8N6Y1 GRAMD4P2-201ENST00000423297 1097 ntBASIC22.42■■□□□ 1.18
PCDH20Q8N6Y1 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC22.42■■□□□ 1.18
PCDH20Q8N6Y1 AC010525.1-201ENST00000585559 441 ntBASIC22.42■■□□□ 1.18
PCDH20Q8N6Y1 BTBD17-201ENST00000375366 1805 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
PCDH20Q8N6Y1 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC22.42■■□□□ 1.18
PCDH20Q8N6Y1 CTU2-201ENST00000312060 1672 ntAPPRIS P3 TSL 5 BASIC22.42■■□□□ 1.18
PCDH20Q8N6Y1 EGR3-203ENST00000519492 1500 ntTSL 5 BASIC22.41■■□□□ 1.18
PCDH20Q8N6Y1 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC22.41■■□□□ 1.18
PCDH20Q8N6Y1 SLC30A2-201ENST00000374276 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDH20Q8N6Y1 CCR10-203ENST00000591765 1942 ntTSL 3 BASIC22.41■■□□□ 1.18
PCDH20Q8N6Y1 STARD3NL-202ENST00000396013 1365 ntAPPRIS P1 TSL 5 BASIC22.41■■□□□ 1.18
PCDH20Q8N6Y1 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC22.41■■□□□ 1.18
PCDH20Q8N6Y1 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC22.41■■□□□ 1.18
PCDH20Q8N6Y1 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC22.41■■□□□ 1.18
PCDH20Q8N6Y1 KCNK13-201ENST00000282146 2522 ntAPPRIS P1 TSL 1 (best) BASIC22.41■■□□□ 1.18
PCDH20Q8N6Y1 AC004687.1-201ENST00000579003 1625 ntBASIC22.41■■□□□ 1.18
PCDH20Q8N6Y1 RBM4B-203ENST00000525754 2339 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
PCDH20Q8N6Y1 EEF1D-256ENST00000618139 2238 ntTSL 5 BASIC22.41■■□□□ 1.18
PCDH20Q8N6Y1 STX4-202ENST00000394998 1498 ntTSL 2 BASIC22.41■■□□□ 1.18
PCDH20Q8N6Y1 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDH20Q8N6Y1 STK19-201ENST00000375331 1663 ntAPPRIS ALT2 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDH20Q8N6Y1 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC22.4■■□□□ 1.18
PCDH20Q8N6Y1 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC22.4■■□□□ 1.18
PCDH20Q8N6Y1 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC22.4■■□□□ 1.18
PCDH20Q8N6Y1 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC22.4■■□□□ 1.18
PCDH20Q8N6Y1 HOMER3-204ENST00000539827 1979 ntAPPRIS P3 TSL 1 (best) BASIC22.39■■□□□ 1.18
PCDH20Q8N6Y1 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC22.39■■□□□ 1.18
PCDH20Q8N6Y1 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.18
PCDH20Q8N6Y1 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PCDH20Q8N6Y1 STOX2-205ENST00000513034 807 ntTSL 3 BASIC22.39■■□□□ 1.17
PCDH20Q8N6Y1 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC22.39■■□□□ 1.17
PCDH20Q8N6Y1 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
PCDH20Q8N6Y1 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCDH20Q8N6Y1 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCDH20Q8N6Y1 PITX2-209ENST00000557119 1889 ntTSL 2 BASIC22.39■■□□□ 1.17
PCDH20Q8N6Y1 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC22.39■■□□□ 1.17
PCDH20Q8N6Y1 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC22.39■■□□□ 1.17
PCDH20Q8N6Y1 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDH20Q8N6Y1 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC22.38■■□□□ 1.17
PCDH20Q8N6Y1 LDB1-201ENST00000361198 2285 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDH20Q8N6Y1 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
PCDH20Q8N6Y1 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
PCDH20Q8N6Y1 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDH20Q8N6Y1 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC22.38■■□□□ 1.17
PCDH20Q8N6Y1 RTL8C-201ENST00000257013 1181 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
PCDH20Q8N6Y1 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDH20Q8N6Y1 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PCDH20Q8N6Y1 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDH20Q8N6Y1 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC22.38■■□□□ 1.17
PCDH20Q8N6Y1 RBM38-205ENST00000440234 686 ntTSL 2 BASIC22.38■■□□□ 1.17
PCDH20Q8N6Y1 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
PCDH20Q8N6Y1 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC22.38■■□□□ 1.17
PCDH20Q8N6Y1 AICDA-202ENST00000537228 667 ntTSL 5 BASIC22.38■■□□□ 1.17
PCDH20Q8N6Y1 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC22.38■■□□□ 1.17
PCDH20Q8N6Y1 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC22.38■■□□□ 1.17
PCDH20Q8N6Y1 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
PCDH20Q8N6Y1 RIOX1-201ENST00000304061 2429 ntAPPRIS P1 BASIC22.38■■□□□ 1.17
PCDH20Q8N6Y1 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC22.38■■□□□ 1.17
PCDH20Q8N6Y1 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDH20Q8N6Y1 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC22.37■■□□□ 1.17
PCDH20Q8N6Y1 NDUFAF8-201ENST00000431388 615 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDH20Q8N6Y1 AP005435.1-201ENST00000529293 1178 ntBASIC22.37■■□□□ 1.17
PCDH20Q8N6Y1 SLC39A4-202ENST00000301305 2174 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDH20Q8N6Y1 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC22.37■■□□□ 1.17
PCDH20Q8N6Y1 KRTAP5-7-201ENST00000398536 1408 ntAPPRIS P1 BASIC22.37■■□□□ 1.17
PCDH20Q8N6Y1 XBP1-207ENST00000611155 1794 ntTSL 5 BASIC22.37■■□□□ 1.17
PCDH20Q8N6Y1 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDH20Q8N6Y1 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC22.37■■□□□ 1.17
PCDH20Q8N6Y1 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDH20Q8N6Y1 CCDC115-202ENST00000409127 1247 ntTSL 2 BASIC22.36■■□□□ 1.17
PCDH20Q8N6Y1 IGHV3-19-201ENST00000521488 291 ntBASIC22.36■■□□□ 1.17
PCDH20Q8N6Y1 SIX3-201ENST00000260653 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.36■■□□□ 1.17
PCDH20Q8N6Y1 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC22.36■■□□□ 1.17
PCDH20Q8N6Y1 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
PCDH20Q8N6Y1 C1QL3-201ENST00000298943 2493 ntAPPRIS P1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDH20Q8N6Y1 SRPK3-204ENST00000370108 1863 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
PCDH20Q8N6Y1 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
PCDH20Q8N6Y1 LGR4-203ENST00000480977 492 ntTSL 2 BASIC22.35■■□□□ 1.17
PCDH20Q8N6Y1 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC22.35■■□□□ 1.17
PCDH20Q8N6Y1 AP003419.1-201ENST00000535922 470 ntTSL 3 BASIC22.35■■□□□ 1.17
PCDH20Q8N6Y1 ACYP1-205ENST00000555463 789 ntTSL 2 BASIC22.35■■□□□ 1.17
PCDH20Q8N6Y1 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PCDH20Q8N6Y1 MADCAM1-208ENST00000621286 1203 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
PCDH20Q8N6Y1 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC22.35■■□□□ 1.17
PCDH20Q8N6Y1 ACP1-201ENST00000272065 1549 ntAPPRIS P5 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDH20Q8N6Y1 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDH20Q8N6Y1 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC22.35■■□□□ 1.17
PCDH20Q8N6Y1 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC22.35■■□□□ 1.17
PCDH20Q8N6Y1 C3orf58-207ENST00000495414 1876 ntTSL 2 BASIC22.34■■□□□ 1.17
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms