Protein–RNA interactions for Protein: Q8IWA5

SLC44A2, Choline transporter-like protein 2, humanhuman

Predicted RBP Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A2Q8IWA5 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC20.79■□□□□ 0.92
SLC44A2Q8IWA5 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC44A2Q8IWA5 DLG3-201ENST00000194900 6112 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
SLC44A2Q8IWA5 FAM83D-202ENST00000619850 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SLC44A2Q8IWA5 TMEM230-205ENST00000379279 1636 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SLC44A2Q8IWA5 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC44A2Q8IWA5 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC20.78■□□□□ 0.92
SLC44A2Q8IWA5 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SLC44A2Q8IWA5 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC20.78■□□□□ 0.92
SLC44A2Q8IWA5 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC44A2Q8IWA5 AC012645.1-201ENST00000515455 1650 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SLC44A2Q8IWA5 SRR-208ENST00000576848 588 ntTSL 4 BASIC20.78■□□□□ 0.92
SLC44A2Q8IWA5 NKILA-201ENST00000613231 537 ntTSL 4 BASIC20.78■□□□□ 0.92
SLC44A2Q8IWA5 SYNGR3-202ENST00000562045 1743 ntTSL 2 BASIC20.78■□□□□ 0.92
SLC44A2Q8IWA5 CACYBP-201ENST00000367679 2766 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC44A2Q8IWA5 GFRA4-201ENST00000290417 1427 ntAPPRIS ALT2 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC44A2Q8IWA5 SDSL-202ENST00000403593 1449 ntAPPRIS P1 TSL 1 (best) BASIC20.78■□□□□ 0.92
SLC44A2Q8IWA5 SESN3-202ENST00000416495 1408 ntTSL 1 (best) BASIC20.78■□□□□ 0.92
SLC44A2Q8IWA5 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SLC44A2Q8IWA5 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
SLC44A2Q8IWA5 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLC44A2Q8IWA5 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC20.77■□□□□ 0.92
SLC44A2Q8IWA5 MSL1-203ENST00000577454 2081 ntTSL 2 BASIC20.77■□□□□ 0.92
SLC44A2Q8IWA5 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC20.77■□□□□ 0.92
SLC44A2Q8IWA5 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
SLC44A2Q8IWA5 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SLC44A2Q8IWA5 STEAP2-204ENST00000394626 2456 ntTSL 2 BASIC20.77■□□□□ 0.91
SLC44A2Q8IWA5 JAGN1-201ENST00000307768 1693 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SLC44A2Q8IWA5 KCNIP1-201ENST00000328939 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SLC44A2Q8IWA5 ELL3-201ENST00000319359 2352 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
SLC44A2Q8IWA5 PEX7-201ENST00000318471 1464 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC44A2Q8IWA5 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
SLC44A2Q8IWA5 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC20.76■□□□□ 0.91
SLC44A2Q8IWA5 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC44A2Q8IWA5 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC20.76■□□□□ 0.91
SLC44A2Q8IWA5 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SLC44A2Q8IWA5 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC44A2Q8IWA5 KRAS-204ENST00000557334 1052 ntTSL 5 BASIC20.76■□□□□ 0.91
SLC44A2Q8IWA5 RNF225-201ENST00000601382 990 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
SLC44A2Q8IWA5 TMEM80-207ENST00000608174 800 ntTSL 5 BASIC20.76■□□□□ 0.91
SLC44A2Q8IWA5 ASPSCR1-208ENST00000580534 1776 ntTSL 2 BASIC20.76■□□□□ 0.91
SLC44A2Q8IWA5 CRHR1-202ENST00000314537 2535 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
SLC44A2Q8IWA5 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
SLC44A2Q8IWA5 GPSM1-204ENST00000429455 2057 ntTSL 3 BASIC20.76■□□□□ 0.91
SLC44A2Q8IWA5 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
SLC44A2Q8IWA5 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC44A2Q8IWA5 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC44A2Q8IWA5 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC44A2Q8IWA5 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC44A2Q8IWA5 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC20.75■□□□□ 0.91
SLC44A2Q8IWA5 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC44A2Q8IWA5 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC44A2Q8IWA5 NAXE-201ENST00000368233 1012 ntTSL 2 BASIC20.75■□□□□ 0.91
SLC44A2Q8IWA5 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC20.75■□□□□ 0.91
SLC44A2Q8IWA5 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
SLC44A2Q8IWA5 ASB1-202ENST00000409297 878 ntTSL 5 BASIC20.75■□□□□ 0.91
SLC44A2Q8IWA5 TRIR-202ENST00000588213 841 ntTSL 3 BASIC20.75■□□□□ 0.91
SLC44A2Q8IWA5 AC131212.1-201ENST00000613771 668 ntBASIC20.75■□□□□ 0.91
SLC44A2Q8IWA5 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC20.75■□□□□ 0.91
SLC44A2Q8IWA5 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC20.75■□□□□ 0.91
SLC44A2Q8IWA5 CCSAP-203ENST00000366687 5089 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC44A2Q8IWA5 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
SLC44A2Q8IWA5 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC20.75■□□□□ 0.91
SLC44A2Q8IWA5 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC44A2Q8IWA5 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.74■□□□□ 0.91
SLC44A2Q8IWA5 C17orf82-201ENST00000623772 1530 ntBASIC20.74■□□□□ 0.91
SLC44A2Q8IWA5 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC44A2Q8IWA5 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC20.74■□□□□ 0.91
SLC44A2Q8IWA5 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC20.74■□□□□ 0.91
SLC44A2Q8IWA5 NBPF26-209ENST00000624419 1133 ntTSL 5 BASIC20.74■□□□□ 0.91
SLC44A2Q8IWA5 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC44A2Q8IWA5 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC44A2Q8IWA5 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC44A2Q8IWA5 C14orf80-206ENST00000392527 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC44A2Q8IWA5 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.74■□□□□ 0.91
SLC44A2Q8IWA5 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC20.74■□□□□ 0.91
SLC44A2Q8IWA5 CPE-201ENST00000402744 2421 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC44A2Q8IWA5 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
SLC44A2Q8IWA5 IRX2-202ENST00000382611 2630 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
SLC44A2Q8IWA5 TERF2-201ENST00000254942 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC44A2Q8IWA5 ZNF444-201ENST00000337080 2042 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC44A2Q8IWA5 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
SLC44A2Q8IWA5 LINC00526-201ENST00000581067 1875 ntBASIC20.73■□□□□ 0.91
SLC44A2Q8IWA5 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC44A2Q8IWA5 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC44A2Q8IWA5 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC44A2Q8IWA5 AC127496.7-201ENST00000625110 1798 ntBASIC20.73■□□□□ 0.91
SLC44A2Q8IWA5 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC44A2Q8IWA5 RPP21-222ENST00000433076 577 ntTSL 2 BASIC20.73■□□□□ 0.91
SLC44A2Q8IWA5 CDKN2A-207ENST00000497750 565 ntTSL 4 BASIC20.73■□□□□ 0.91
SLC44A2Q8IWA5 CDKN2A-212ENST00000578845 678 ntTSL 2 BASIC20.73■□□□□ 0.91
SLC44A2Q8IWA5 RASSF1-AS1-201ENST00000629828 790 ntBASIC20.73■□□□□ 0.91
SLC44A2Q8IWA5 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
SLC44A2Q8IWA5 SRPK3-202ENST00000370101 1958 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC44A2Q8IWA5 NBL1-202ENST00000375136 2172 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC44A2Q8IWA5 PYCR1-203ENST00000402252 1346 ntTSL 2 BASIC20.73■□□□□ 0.91
SLC44A2Q8IWA5 CCDC7-201ENST00000277657 1899 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
SLC44A2Q8IWA5 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SLC44A2Q8IWA5 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
SLC44A2Q8IWA5 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC20.72■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms