Protein–RNA interactions for Protein: Q6NVV7

CDPF1, Cysteine-rich DPF motif domain-containing protein 1, humanhuman

Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDPF1Q6NVV7 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDPF1Q6NVV7 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDPF1Q6NVV7 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
CDPF1Q6NVV7 MRPL38-201ENST00000309352 1888 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
CDPF1Q6NVV7 AC110285.7-201ENST00000624417 1536 ntBASIC16.65■□□□□ 0.26
CDPF1Q6NVV7 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC16.65■□□□□ 0.26
CDPF1Q6NVV7 LINC01006-201ENST00000333319 2292 ntBASIC16.65■□□□□ 0.26
CDPF1Q6NVV7 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
CDPF1Q6NVV7 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC16.64■□□□□ 0.26
CDPF1Q6NVV7 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDPF1Q6NVV7 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC16.64■□□□□ 0.25
CDPF1Q6NVV7 RPS2-210ENST00000530225 765 ntTSL 2 BASIC16.64■□□□□ 0.25
CDPF1Q6NVV7 AC012354.3-201ENST00000623734 483 ntBASIC16.64■□□□□ 0.25
CDPF1Q6NVV7 PPIL6-203ENST00000440797 1693 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDPF1Q6NVV7 ARRB2-201ENST00000269260 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDPF1Q6NVV7 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
CDPF1Q6NVV7 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC16.64■□□□□ 0.25
CDPF1Q6NVV7 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
CDPF1Q6NVV7 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC16.64■□□□□ 0.25
CDPF1Q6NVV7 SYNC-201ENST00000373484 1824 ntAPPRIS ALT2 TSL 2 BASIC16.63■□□□□ 0.25
CDPF1Q6NVV7 C7orf25-206ENST00000447342 1823 ntTSL 2 BASIC16.63■□□□□ 0.25
CDPF1Q6NVV7 COL4A3BP-201ENST00000261415 2262 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDPF1Q6NVV7 CEND1-201ENST00000330106 1649 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDPF1Q6NVV7 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC16.63■□□□□ 0.25
CDPF1Q6NVV7 CHST6-202ENST00000390664 2093 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDPF1Q6NVV7 HHEX-201ENST00000282728 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDPF1Q6NVV7 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC16.63■□□□□ 0.25
CDPF1Q6NVV7 AC126177.7-201ENST00000547904 679 ntBASIC16.63■□□□□ 0.25
CDPF1Q6NVV7 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC16.63■□□□□ 0.25
CDPF1Q6NVV7 ITGB1BP1-202ENST00000355346 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDPF1Q6NVV7 PGR-AS1-202ENST00000632820 1545 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDPF1Q6NVV7 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDPF1Q6NVV7 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDPF1Q6NVV7 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDPF1Q6NVV7 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
CDPF1Q6NVV7 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC16.63■□□□□ 0.25
CDPF1Q6NVV7 SUGCT-201ENST00000335693 1645 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
CDPF1Q6NVV7 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDPF1Q6NVV7 PODN-203ENST00000395871 2744 ntTSL 5 BASIC16.62■□□□□ 0.25
CDPF1Q6NVV7 KIRREL2-201ENST00000262625 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
CDPF1Q6NVV7 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC16.62■□□□□ 0.25
CDPF1Q6NVV7 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
CDPF1Q6NVV7 VPS9D1-AS1-202ENST00000562866 1753 ntTSL 2 BASIC16.62■□□□□ 0.25
CDPF1Q6NVV7 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDPF1Q6NVV7 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CDPF1Q6NVV7 KCTD15-206ENST00000588881 1211 ntAPPRIS P1 TSL 2 BASIC16.62■□□□□ 0.25
CDPF1Q6NVV7 B3GNT4-201ENST00000324189 1642 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDPF1Q6NVV7 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC16.62■□□□□ 0.25
CDPF1Q6NVV7 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC16.62■□□□□ 0.25
CDPF1Q6NVV7 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC16.62■□□□□ 0.25
CDPF1Q6NVV7 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
CDPF1Q6NVV7 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC16.61■□□□□ 0.25
CDPF1Q6NVV7 PBX1-222ENST00000627490 1769 ntTSL 2 BASIC16.61■□□□□ 0.25
CDPF1Q6NVV7 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDPF1Q6NVV7 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDPF1Q6NVV7 SCAMP3-202ENST00000355379 1537 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDPF1Q6NVV7 MLST8-202ENST00000382450 1861 ntAPPRIS ALT1 TSL 2 BASIC16.61■□□□□ 0.25
CDPF1Q6NVV7 MLST8-215ENST00000564088 1861 ntAPPRIS P3 TSL 2 BASIC16.61■□□□□ 0.25
CDPF1Q6NVV7 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDPF1Q6NVV7 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDPF1Q6NVV7 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC16.61■□□□□ 0.25
CDPF1Q6NVV7 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDPF1Q6NVV7 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDPF1Q6NVV7 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.61■□□□□ 0.25
CDPF1Q6NVV7 KAT8-202ENST00000448516 1789 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDPF1Q6NVV7 HACD3-205ENST00000562901 1797 ntTSL 5 BASIC16.61■□□□□ 0.25
CDPF1Q6NVV7 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
CDPF1Q6NVV7 BLCAP-208ENST00000414542 2205 ntAPPRIS P1 TSL 3 BASIC16.61■□□□□ 0.25
CDPF1Q6NVV7 KRT72-203ENST00000537672 1813 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
CDPF1Q6NVV7 GPR137-202ENST00000377702 1478 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
CDPF1Q6NVV7 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC16.6■□□□□ 0.25
CDPF1Q6NVV7 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDPF1Q6NVV7 MMP17-201ENST00000360564 2411 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDPF1Q6NVV7 RRAD-201ENST00000299759 1569 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDPF1Q6NVV7 ZYX-201ENST00000322764 2493 ntAPPRIS P2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDPF1Q6NVV7 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDPF1Q6NVV7 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDPF1Q6NVV7 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC16.6■□□□□ 0.25
CDPF1Q6NVV7 TLX1-203ENST00000467928 1838 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDPF1Q6NVV7 CXCR3-201ENST00000373691 1861 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDPF1Q6NVV7 TNFAIP8L3-202ENST00000637513 2002 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDPF1Q6NVV7 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDPF1Q6NVV7 WRNIP1-202ENST00000380769 3239 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
CDPF1Q6NVV7 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDPF1Q6NVV7 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
CDPF1Q6NVV7 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDPF1Q6NVV7 CCDC189-206ENST00000543610 1967 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDPF1Q6NVV7 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDPF1Q6NVV7 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC16.59■□□□□ 0.25
CDPF1Q6NVV7 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
CDPF1Q6NVV7 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CDPF1Q6NVV7 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC16.59■□□□□ 0.25
CDPF1Q6NVV7 SLC19A1-202ENST00000380010 1884 ntAPPRIS ALT2 TSL 1 (best) BASIC16.59■□□□□ 0.25
CDPF1Q6NVV7 RNF146-213ENST00000610153 2070 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.25
CDPF1Q6NVV7 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
CDPF1Q6NVV7 ACADVL-202ENST00000350303 2191 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
CDPF1Q6NVV7 AC060814.1-201ENST00000554326 538 ntBASIC16.58■□□□□ 0.24
CDPF1Q6NVV7 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
CDPF1Q6NVV7 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
CDPF1Q6NVV7 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 15.8 ms