Protein–RNA interactions for Protein: Q07955

SRSF1, Serine/arginine-rich splicing factor 1, humanhuman

Known RBP eCLIP

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF1Q07955 LMBR1L-229ENST00000553040 768 ntTSL 510.12□□□□□ -0.793e-6■■■■□ 19.7
SRSF1Q07955 OSBPL2-203ENST00000439951 3886 ntTSL 5 BASIC9.95□□□□□ -0.823e-6■■■■□ 19.7
SRSF1Q07955 OSBPL2-202ENST00000358053 3936 ntTSL 1 (best) BASIC9.83□□□□□ -0.843e-6■■■■□ 19.7
SRSF1Q07955 CARS-205ENST00000465207 422 ntTSL 59.31□□□□□ -0.923e-6■■■■□ 19.7
SRSF1Q07955 LMBR1L-227ENST00000552577 2083 ntTSL 29.31□□□□□ -0.923e-6■■■■□ 19.7
SRSF1Q07955 SREK1-205ENST00000519205 553 ntTSL 29.08□□□□□ -0.963e-6■■■■□ 19.7
SRSF1Q07955 OSBPL2-204ENST00000448156 450 ntTSL 39.04□□□□□ -0.963e-6■■■■□ 19.7
SRSF1Q07955 PDXDC1-214ENST00000566633 2597 ntTSL 28.83□□□□□ -18e-7■■■■□ 19.7
SRSF1Q07955 RNF213-207ENST00000559070 4644 ntTSL 1 (best)8.78□□□□□ -13e-6■■■■□ 19.7
SRSF1Q07955 NUB1-211ENST00000497987 861 ntTSL 28.48□□□□□ -1.053e-6■■■■□ 19.7
SRSF1Q07955 OSBPL2-207ENST00000618198 693 ntTSL 28.27□□□□□ -1.093e-6■■■■□ 19.7
SRSF1Q07955 HBP1-208ENST00000468410 2704 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.311e-16■■■■□ 19.7
SRSF1Q07955 GTPBP2-210ENST00000496137 516 ntTSL 36.23□□□□□ -1.413e-6■■■■□ 19.7
SRSF1Q07955 NUB1-208ENST00000480907 977 ntTSL 56.06□□□□□ -1.443e-6■■■■□ 19.7
SRSF1Q07955 SREK1-211ENST00000522214 882 ntTSL 25.38□□□□□ -1.553e-6■■■■□ 19.7
SRSF1Q07955 HBP1-209ENST00000478930 563 ntTSL 45.07□□□□□ -1.61e-16■■■■□ 19.7
SRSF1Q07955 KDM3A-212ENST00000485171 556 ntTSL 44.29□□□□□ -1.723e-6■■■■□ 19.7
SRSF1Q07955 HBP1-205ENST00000464009 478 ntTSL 54.11□□□□□ -1.751e-16■■■■□ 19.7
SRSF1Q07955 OAZ1-205ENST00000589361 679 ntTSL 1 (best)14.75□□□□□ -0.055e-15■■■■□ 19.6
SRSF1Q07955 COL7A1-207ENST00000467985 709 ntTSL 518.08■□□□□ 0.481e-6■■■■□ 19.6
SRSF1Q07955 COL7A1-202ENST00000422991 597 ntTSL 515.14■□□□□ 0.011e-6■■■■□ 19.6
SRSF1Q07955 COL7A1-203ENST00000459756 818 ntTSL 515.14■□□□□ 0.011e-6■■■■□ 19.6
SRSF1Q07955 LIG4-202ENST00000405925 4065 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.291e-6■■■■□ 19.6
SRSF1Q07955 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC18.08■□□□□ 0.482e-8■■■■□ 19.6
SRSF1Q07955 EIF2B4-211ENST00000616081 1754 ntTSL 5 BASIC16.87■□□□□ 0.292e-8■■■■□ 19.6
SRSF1Q07955 EIF2B4-207ENST00000462749 1089 ntTSL 316.46■□□□□ 0.232e-8■■■■□ 19.6
SRSF1Q07955 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC15.82■□□□□ 0.122e-8■■■■□ 19.6
SRSF1Q07955 EIF2B4-204ENST00000418146 742 ntTSL 515.45■□□□□ 0.062e-8■■■■□ 19.6
SRSF1Q07955 EIF2B4-202ENST00000405940 1570 ntTSL 1 (best)15.25■□□□□ 0.032e-8■■■■□ 19.6
SRSF1Q07955 EIF2B4-205ENST00000445933 1608 ntAPPRIS ALT1 TSL 1 (best) BASIC13.97□□□□□ -0.172e-8■■■■□ 19.6
SRSF1Q07955 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC13.58□□□□□ -0.232e-8■■■■□ 19.6
SRSF1Q07955 EIF2B4-206ENST00000451130 1633 ntTSL 1 (best) BASIC12.66□□□□□ -0.382e-8■■■■□ 19.6
SRSF1Q07955 EIF2B4-208ENST00000475582 4293 ntTSL 58.26□□□□□ -1.092e-8■■■■□ 19.6
SRSF1Q07955 SAFB2-204ENST00000589925 506 ntTSL 315.62■□□□□ 0.092e-6■■■■□ 19.6
SRSF1Q07955 ANP32A-207ENST00000486054 2015 ntTSL 214.5□□□□□ -0.096e-25■■■■□ 19.6
SRSF1Q07955 AFDN-221ENST00000511637 5999 ntTSL 1 (best)8.4□□□□□ -1.066e-7■■■■□ 19.6
SRSF1Q07955 SPPL2B-211ENST00000614794 1559 ntTSL 1 (best) BASIC19.7■□□□□ 0.744e-6■■■■□ 19.6
SRSF1Q07955 SPPL2B-214ENST00000622308 749 ntTSL 1 (best)17.26■□□□□ 0.354e-6■■■■□ 19.6
SRSF1Q07955 SPPL2B-213ENST00000621568 1017 ntTSL 516.43■□□□□ 0.224e-6■■■■□ 19.6
SRSF1Q07955 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.222e-10■■■■□ 19.6
SRSF1Q07955 SPPL2B-208ENST00000612623 495 ntTSL 516.12■□□□□ 0.174e-6■■■■□ 19.6
SRSF1Q07955 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC16.05■□□□□ 0.164e-6■■■■□ 19.6
SRSF1Q07955 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.054e-6■■■■□ 19.6
SRSF1Q07955 SPPL2B-206ENST00000593243 551 ntTSL 414.58□□□□□ -0.084e-6■■■■□ 19.6
SRSF1Q07955 ERICH1-204ENST00000518895 585 ntTSL 313.97□□□□□ -0.174e-6■■■■□ 19.6
SRSF1Q07955 ERICH1-206ENST00000522706 1551 ntAPPRIS ALT2 TSL 5 BASIC12.9□□□□□ -0.344e-6■■■■□ 19.6
SRSF1Q07955 SPPL2B-207ENST00000610743 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.444e-6■■■■□ 19.6
SRSF1Q07955 SPPL2B-209ENST00000613503 3456 ntAPPRIS P4 TSL 1 (best) BASIC10.81□□□□□ -0.684e-6■■■■□ 19.6
SRSF1Q07955 ERICH1-207ENST00000522893 3170 ntAPPRIS ALT2 TSL 1 (best)10.08□□□□□ -0.84e-6■■■■□ 19.6
SRSF1Q07955 SFPQ-207ENST00000471991 440 ntTSL 213.2□□□□□ -0.31e-11■■■■□ 19.6
SRSF1Q07955 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC19.03■□□□□ 0.645e-7■■■■□ 19.6
SRSF1Q07955 AFDN-205ENST00000392108 6812 ntTSL 1 (best) BASIC11.54□□□□□ -0.565e-7■■■■□ 19.6
SRSF1Q07955 AFDN-204ENST00000366809 4839 ntTSL 1 (best)8.15□□□□□ -1.16e-7■■■■□ 19.6
SRSF1Q07955 NRBP2-208ENST00000532940 1782 ntTSL 1 (best)19.8■□□□□ 0.761e-6■■■■□ 19.5
SRSF1Q07955 NRBP2-210ENST00000533846 1623 ntTSL 1 (best)19.76■□□□□ 0.751e-6■■■■□ 19.5
SRSF1Q07955 NRBP2-206ENST00000530347 1037 ntTSL 519.56■□□□□ 0.721e-6■■■■□ 19.5
SRSF1Q07955 NRBP2-204ENST00000529747 3693 ntTSL 212.88□□□□□ -0.351e-6■■■■□ 19.5
SRSF1Q07955 CENPT-226ENST00000568069 507 ntTSL 419.84■□□□□ 0.771e-11■■■■□ 19.5
SRSF1Q07955 SNHG12-203ENST00000464115 712 ntTSL 317.27■□□□□ 0.361e-11■■■■□ 19.5
SRSF1Q07955 CENPT-204ENST00000562338 583 ntTSL 416.83■□□□□ 0.281e-11■■■■□ 19.5
SRSF1Q07955 CENPT-228ENST00000568564 537 ntTSL 415.6■□□□□ 0.091e-11■■■■□ 19.5
SRSF1Q07955 CENPT-216ENST00000565114 633 ntTSL 414.78□□□□□ -0.041e-11■■■■□ 19.5
SRSF1Q07955 CENPT-203ENST00000561593 673 ntTSL 414.59□□□□□ -0.071e-11■■■■□ 19.5
SRSF1Q07955 CENPT-221ENST00000565713 822 ntTSL 214.53□□□□□ -0.081e-11■■■■□ 19.5
SRSF1Q07955 CENPT-206ENST00000562483 652 ntTSL 314.32□□□□□ -0.121e-11■■■■□ 19.5
SRSF1Q07955 CENPT-222ENST00000566067 631 ntTSL 314.17□□□□□ -0.141e-11■■■■□ 19.5
SRSF1Q07955 SNHG12-202ENST00000461832 675 ntTSL 213.61□□□□□ -0.231e-11■■■■□ 19.5
SRSF1Q07955 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC12.85□□□□□ -0.358e-8■■■■□ 19.5
SRSF1Q07955 CENPT-205ENST00000562462 1005 ntTSL 212.52□□□□□ -0.411e-11■■■■□ 19.5
SRSF1Q07955 DNMT3A-204ENST00000380756 4477 ntTSL 1 (best)10.25□□□□□ -0.778e-8■■■■□ 19.5
SRSF1Q07955 CENPT-214ENST00000564538 501 ntTSL 410.12□□□□□ -0.791e-11■■■■□ 19.5
SRSF1Q07955 DNMT3A-202ENST00000321117 4279 ntAPPRIS P2 TSL 1 (best) BASIC10.12□□□□□ -0.798e-8■■■■□ 19.5
SRSF1Q07955 DNMT3A-201ENST00000264709 9501 ntAPPRIS P2 TSL 1 (best) BASIC9.68□□□□□ -0.868e-8■■■■□ 19.5
SRSF1Q07955 DNMT3A-203ENST00000380746 3589 ntTSL 1 (best) BASIC8.31□□□□□ -1.088e-8■■■■□ 19.5
SRSF1Q07955 RAD54L-202ENST00000442598 2549 ntAPPRIS P1 TSL 2 BASIC8.14□□□□□ -1.115e-6■■■■□ 19.5
SRSF1Q07955 RAD54L-201ENST00000371975 3108 ntAPPRIS P1 TSL 1 (best) BASIC7.32□□□□□ -1.245e-6■■■■□ 19.5
SRSF1Q07955 CUL4A-211ENST00000498562 790 ntTSL 325.2■■□□□ 1.628e-7■■■■□ 19.5
SRSF1Q07955 CUL4A-205ENST00000463426 893 ntTSL 323.22■■□□□ 1.318e-7■■■■□ 19.5
SRSF1Q07955 CUL4A-209ENST00000488558 1111 ntTSL 3 BASIC21.98■■□□□ 1.118e-7■■■■□ 19.5
SRSF1Q07955 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.858e-7■■■■□ 19.5
SRSF1Q07955 CUL4A-204ENST00000451881 3724 ntTSL 5 BASIC10.93□□□□□ -0.668e-7■■■■□ 19.5
SRSF1Q07955 CUL4A-203ENST00000375441 4037 ntTSL 1 (best) BASIC10.32□□□□□ -0.768e-7■■■■□ 19.5
SRSF1Q07955 CUL4A-212ENST00000617546 5666 ntTSL 1 (best) BASIC8.58□□□□□ -1.048e-7■■■■□ 19.5
SRSF1Q07955 CUL4A-201ENST00000326335 3705 ntTSL 1 (best) BASIC8.12□□□□□ -1.118e-7■■■■□ 19.5
SRSF1Q07955 ATF5-202ENST00000595125 1637 ntAPPRIS P1 TSL 2 BASIC17.35■□□□□ 0.375e-7■■■■□ 19.5
SRSF1Q07955 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.24■□□□□ 0.035e-7■■■■□ 19.5
SRSF1Q07955 FDFT1-219ENST00000531249 768 ntTSL 212.2□□□□□ -0.464e-7■■■■□ 19.5
SRSF1Q07955 FDFT1-221ENST00000532266 583 ntTSL 57.31□□□□□ -1.244e-7■■■■□ 19.5
SRSF1Q07955 PABPC1L-202ENST00000217074 1263 ntTSL 5 BASIC22.21■■□□□ 1.151e-7■■■■□ 19.5
SRSF1Q07955 NDUFV2-208ENST00000577703 854 ntTSL 319.77■□□□□ 0.764e-7■■■■□ 19.5
SRSF1Q07955 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.764e-7■■■■□ 19.5
SRSF1Q07955 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC17.87■□□□□ 0.454e-7■■■■□ 19.5
SRSF1Q07955 PABPC1L-216ENST00000490798 1384 ntTSL 317.63■□□□□ 0.411e-7■■■■□ 19.5
SRSF1Q07955 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.261e-7■■■■□ 19.5
SRSF1Q07955 NDUFV2-209ENST00000583375 211 ntTSL 515.74■□□□□ 0.114e-7■■■■□ 19.5
SRSF1Q07955 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC13.54□□□□□ -0.241e-7■■■■□ 19.5
SRSF1Q07955 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC13.27□□□□□ -0.281e-7■■■■□ 19.5
SRSF1Q07955 PABPC1L-213ENST00000481196 488 ntTSL 511.7□□□□□ -0.541e-7■■■■□ 19.5
SRSF1Q07955 PABPC1L-211ENST00000476056 1214 ntTSL 511.38□□□□□ -0.591e-7■■■■□ 19.5
SRSF1Q07955 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC25.29■■□□□ 1.641e-7■■■■□ 19.5
Retrieved 100 of 14,836 protein–RNA pairs in 131.4 ms