RNA–Protein interactions for RNA: ENST00000566633.1

PDXDC1-214, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 2

Gene PDXDC1, Length 2,597 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-214ENST00000566633 NISCHQ9Y2I1 1504 aa23.97■■□□□ 1.43
PDXDC1-214ENST00000566633 CCDC180Q9P1Z9 1646 aa20.69■□□□□ 0.9
PDXDC1-214ENST00000566633 DCAF8L2P0C7V8 631 aa20.22■□□□□ 0.83
PDXDC1-214ENST00000566633 ZCCHC6Q5VYS8 1495 aaKnown RBP20.1■□□□□ 0.81
PDXDC1-214ENST00000566633 ABCC9O60706 1549 aa19.96■□□□□ 0.79
PDXDC1-214ENST00000566633 SHROOM4Q9ULL8 1493 aa19.9■□□□□ 0.78
PDXDC1-214ENST00000566633 DCAF1Q9Y4B6 1507 aa19.65■□□□□ 0.74
PDXDC1-214ENST00000566633 MYO15BQ96JP2 1530 aa19.39■□□□□ 0.69
PDXDC1-214ENST00000566633 NACADO15069 1562 aa19.37■□□□□ 0.69
PDXDC1-214ENST00000566633 SCRIBQ14160 1630 aa19.3■□□□□ 0.68
PDXDC1-214ENST00000566633 RB1CC1Q8TDY2 1594 aa19.23■□□□□ 0.67
PDXDC1-214ENST00000566633 SUPT5HO00267 1087 aaKnown RBP19.16■□□□□ 0.66
PDXDC1-214ENST00000566633 PABPN1Q86U42 306 aaKnown RBP eCLIP18.96■□□□□ 0.63
PDXDC1-214ENST00000566633 UNC13AQ9UPW8 1703 aa18.83■□□□□ 0.6
PDXDC1-214ENST00000566633 CECR2Q9BXF3 1484 aa18.78■□□□□ 0.6
PDXDC1-214ENST00000566633 BICRAQ9NZM4 1560 aa18.71■□□□□ 0.59
PDXDC1-214ENST00000566633 RSF1Q96T23 1441 aaPredicted RBP18.68■□□□□ 0.58
PDXDC1-214ENST00000566633 MROH2BQ7Z745 1585 aa18.6■□□□□ 0.57
PDXDC1-214ENST00000566633 BAZ1AQ9NRL2 1556 aaPredicted RBP18.46■□□□□ 0.55
PDXDC1-214ENST00000566633 WIZO95785 1651 aa18.43■□□□□ 0.54
PDXDC1-214ENST00000566633 SMARCA4P51532 1647 aa18.39■□□□□ 0.53
PDXDC1-214ENST00000566633 CHIC1Q5VXU3 224 aa18.23■□□□□ 0.51
PDXDC1-214ENST00000566633 EIF4G1Q04637 1599 aaKnown RBP18.17■□□□□ 0.5
PDXDC1-214ENST00000566633 ATAD2BQ9ULI0 1458 aa18.17■□□□□ 0.5
PDXDC1-214ENST00000566633 TOP2AP11388 1531 aaKnown RBP18.13■□□□□ 0.49
PDXDC1-214ENST00000566633 CCDC88BA6NC98 1476 aa18.07■□□□□ 0.48
PDXDC1-214ENST00000566633 PEG3Q9GZU2 1588 aa18.07■□□□□ 0.48
PDXDC1-214ENST00000566633 BAZ1BQ9UIG0 1483 aaKnown RBP18.06■□□□□ 0.48
PDXDC1-214ENST00000566633 SMARCA2P51531 1590 aa18.04■□□□□ 0.48
PDXDC1-214ENST00000566633 NCAPD3P42695 1498 aa17.95■□□□□ 0.46
PDXDC1-214ENST00000566633 CC2D2AQ9P2K1 1620 aa17.92■□□□□ 0.46
PDXDC1-214ENST00000566633 TRIM41Q8WV44 630 aa17.9■□□□□ 0.46
PDXDC1-214ENST00000566633 HMGXB3Q12766 1538 aa17.84■□□□□ 0.45
PDXDC1-214ENST00000566633 DNAJC5BQ9UF47 199 aa17.81■□□□□ 0.44
PDXDC1-214ENST00000566633 ABCC8Q09428 1581 aa17.75■□□□□ 0.43
PDXDC1-214ENST00000566633 FAM9AQ8IZU1 332 aaPredicted RBP17.74■□□□□ 0.43
PDXDC1-214ENST00000566633 LOC105371045A0A1W2PR82 267 aa17.67■□□□□ 0.42
PDXDC1-214ENST00000566633 EHMT2Q96KQ7 1210 aa17.63■□□□□ 0.41
PDXDC1-214ENST00000566633 CFTRP13569 1480 aa17.58■□□□□ 0.4
PDXDC1-214ENST00000566633 CADPSQ9ULU8 1353 aa17.57■□□□□ 0.4
PDXDC1-214ENST00000566633 WRNQ14191 1432 aaPredicted RBP eCLIP17.57■□□□□ 0.4
PDXDC1-214ENST00000566633 NESP48681 1621 aa17.52■□□□□ 0.4
PDXDC1-214ENST00000566633 SYNJ1O43426 1573 aa17.48■□□□□ 0.39
PDXDC1-214ENST00000566633 SOGA1O94964 1423 aa17.46■□□□□ 0.39
PDXDC1-214ENST00000566633 RUSC2Q8N2Y8 1516 aa17.41■□□□□ 0.38
PDXDC1-214ENST00000566633 PCGF6Q9BYE7 350 aa17.38■□□□□ 0.37
PDXDC1-214ENST00000566633 FANCD2Q9BXW9 1451 aa17.38■□□□□ 0.37
PDXDC1-214ENST00000566633 CUX1P39880 1505 aa17.36■□□□□ 0.37
PDXDC1-214ENST00000566633 TOP2BQ02880 1626 aa17.32■□□□□ 0.36
PDXDC1-214ENST00000566633 CSRNP3Q8WYN3 585 aa17.31■□□□□ 0.36
PDXDC1-214ENST00000566633 HRCP23327 699 aa17.29■□□□□ 0.36
PDXDC1-214ENST00000566633 LAMC3Q9Y6N6 1575 aa17.28■□□□□ 0.36
PDXDC1-214ENST00000566633 PRDM2Q13029 1718 aa17.26■□□□□ 0.35
PDXDC1-214ENST00000566633 PDS5BQ9NTI5 1447 aa17.25■□□□□ 0.35
PDXDC1-214ENST00000566633 BIVM-ERCC5R4GMW8 1640 aa17.24■□□□□ 0.35
PDXDC1-214ENST00000566633 CEP164Q9UPV0 1460 aa17.23■□□□□ 0.35
PDXDC1-214ENST00000566633 FGD5Q6ZNL6 1462 aa17.19■□□□□ 0.34
PDXDC1-214ENST00000566633 UBTFP17480 764 aaKnown RBP17.18■□□□□ 0.34
PDXDC1-214ENST00000566633 TRIM26Q12899 539 aaPredicted RBP17.18■□□□□ 0.34
PDXDC1-214ENST00000566633 EEA1Q15075 1411 aa17.18■□□□□ 0.34
PDXDC1-214ENST00000566633 URB2Q14146 1524 aaKnown RBP17.16■□□□□ 0.34
PDXDC1-214ENST00000566633 TOPBP1Q92547 1522 aa17.16■□□□□ 0.34
PDXDC1-214ENST00000566633 RAD54L2Q9Y4B4 1467 aa17.14■□□□□ 0.33
PDXDC1-214ENST00000566633 KIF21AQ7Z4S6 1674 aa17.13■□□□□ 0.33
PDXDC1-214ENST00000566633 CUX2O14529 1486 aa17.12■□□□□ 0.33
PDXDC1-214ENST00000566633 DNMBPQ6XZF7 1577 aa17.11■□□□□ 0.33
PDXDC1-214ENST00000566633 POLA1P09884 1462 aaPredicted RBP17.1■□□□□ 0.33
PDXDC1-214ENST00000566633 KIF27Q86VH2 1401 aa17.1■□□□□ 0.33
PDXDC1-214ENST00000566633 RANGAP1P46060 587 aaPredicted RBP17.09■□□□□ 0.33
PDXDC1-214ENST00000566633 ERCC6Q03468 1493 aa17.06■□□□□ 0.32
PDXDC1-214ENST00000566633 RAPGEF2Q9Y4G8 1499 aa17.05■□□□□ 0.32
PDXDC1-214ENST00000566633 GOLGA3Q08378 1498 aa17.03■□□□□ 0.32
PDXDC1-214ENST00000566633 IGF1RP08069 1367 aa17.02■□□□□ 0.32
PDXDC1-214ENST00000566633 TDRD9Q8NDG6 1382 aaKnown RBP17.02■□□□□ 0.32
PDXDC1-214ENST00000566633 MRC2Q9UBG0 1479 aa17■□□□□ 0.31
PDXDC1-214ENST00000566633 TNIKQ9UKE5 1360 aa17■□□□□ 0.31
PDXDC1-214ENST00000566633 PRXQ9BXM0 1461 aa16.97■□□□□ 0.31
PDXDC1-214ENST00000566633 ABCA10Q8WWZ4 1543 aa16.96■□□□□ 0.31
PDXDC1-214ENST00000566633 CEP162Q5TB80 1403 aa16.96■□□□□ 0.31
PDXDC1-214ENST00000566633 PPARGC1BQ86YN6 1023 aaKnown RBP16.94■□□□□ 0.3
PDXDC1-214ENST00000566633 KIF21BO75037 1637 aa16.94■□□□□ 0.3
PDXDC1-214ENST00000566633 CARMIL1Q5VZK9 1371 aa16.93■□□□□ 0.3
PDXDC1-214ENST00000566633 AQRO60306 1485 aaKnown RBP eCLIP16.88■□□□□ 0.291e-7■■■■□ 23
PDXDC1-214ENST00000566633 WDR62O43379 1518 aa16.87■□□□□ 0.29
PDXDC1-214ENST00000566633 GAPVD1Q14C86 1478 aa16.86■□□□□ 0.29
PDXDC1-214ENST00000566633 ZNF608Q9ULD9 1512 aaPredicted RBP16.84■□□□□ 0.29
PDXDC1-214ENST00000566633 TARBP1Q13395 1621 aaKnown RBP16.84■□□□□ 0.29
PDXDC1-214ENST00000566633 ERICH3Q5RHP9 1530 aa16.83■□□□□ 0.29
PDXDC1-214ENST00000566633 CLIP1P30622 1438 aa16.83■□□□□ 0.28
PDXDC1-214ENST00000566633 TTBK1Q5TCY1 1321 aaPredicted RBP16.82■□□□□ 0.28
PDXDC1-214ENST00000566633 THOC2Q8NI27 1593 aaKnown RBP16.81■□□□□ 0.28
PDXDC1-214ENST00000566633 WDR97A6NE52 1622 aa16.8■□□□□ 0.28
PDXDC1-214ENST00000566633 IFT140Q96RY7 1462 aa16.78■□□□□ 0.28
PDXDC1-214ENST00000566633 ABCA5Q8WWZ7 1642 aa16.78■□□□□ 0.28
PDXDC1-214ENST00000566633 P3H3Q8IVL6 736 aa16.74■□□□□ 0.27
PDXDC1-214ENST00000566633 ZEB1P37275 1124 aaPredicted RBP16.73■□□□□ 0.27
PDXDC1-214ENST00000566633 GRIN2BQ13224 1484 aa16.69■□□□□ 0.26
PDXDC1-214ENST00000566633 FBLN2P98095 1184 aa16.69■□□□□ 0.26
PDXDC1-214ENST00000566633 CUL7Q14999 1698 aa16.67■□□□□ 0.26
PDXDC1-214ENST00000566633 ARAP1Q96P48 1450 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms