RNA–Protein interactions for RNA: ENST00000522214.1

SREK1-211, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 2

Gene SREK1, Length 882 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-211ENST00000522214 AEBP2Q6ZN18 517 aaPredicted RBP25.13■■□□□ 1.61
SREK1-211ENST00000522214 CHIC1Q5VXU3 224 aa24.47■■□□□ 1.51
SREK1-211ENST00000522214 PHF23Q9BUL5 403 aaPredicted RBP21.43■■□□□ 1.02
SREK1-211ENST00000522214 SENP3Q9H4L4 574 aaPredicted RBP21.28■■□□□ 1
SREK1-211ENST00000522214 PLPPR3Q6T4P5 718 aa20■□□□□ 0.79
SREK1-211ENST00000522214 FOXD1Q16676 465 aa19.89■□□□□ 0.77
SREK1-211ENST00000522214 PPP6R1Q9UPN7 881 aa18.88■□□□□ 0.61
SREK1-211ENST00000522214 ADRA2BP18089 450 aa18.87■□□□□ 0.61
SREK1-211ENST00000522214 PIAS4Q8N2W9 510 aaPredicted RBP18.69■□□□□ 0.58
SREK1-211ENST00000522214 MSH5O43196 834 aa18.39■□□□□ 0.53
SREK1-211ENST00000522214 PPP4R3CPQ6ZMV5 832 aa17.58■□□□□ 0.4
SREK1-211ENST00000522214 POTEDQ86YR6 584 aa17.53■□□□□ 0.4
SREK1-211ENST00000522214 SCAF1Q9H7N4 1312 aaKnown RBP17.44■□□□□ 0.38
SREK1-211ENST00000522214 KCNA4P22459 653 aa17.32■□□□□ 0.36
SREK1-211ENST00000522214 MAPK8IP2Q13387 824 aaPredicted RBP17.28■□□□□ 0.36
SREK1-211ENST00000522214 NCBP3Q53F19 620 aaKnown RBP17.28■□□□□ 0.36
SREK1-211ENST00000522214 CNKSR2Q8WXI2 1034 aa17.11■□□□□ 0.33
SREK1-211ENST00000522214 DMRT2Q9Y5R5 561 aa16.92■□□□□ 0.3
SREK1-211ENST00000522214 NPM3O75607 178 aaKnown RBP16.9■□□□□ 0.3
SREK1-211ENST00000522214 RNF216Q9NWF9 866 aaPredicted RBP16.73■□□□□ 0.27
SREK1-211ENST00000522214 HOXD11P31277 338 aaPredicted RBP16.59■□□□□ 0.25
SREK1-211ENST00000522214 SLC4A1APQ9BWU0 796 aaKnown RBP16.59■□□□□ 0.25
SREK1-211ENST00000522214 DNAJC5BQ9UF47 199 aa16.52■□□□□ 0.24
SREK1-211ENST00000522214 DCAF8L1A6NGE4 600 aa16.45■□□□□ 0.22
SREK1-211ENST00000522214 EHMT2Q96KQ7 1210 aa16.24■□□□□ 0.19
SREK1-211ENST00000522214 CSRNP3Q8WYN3 585 aa15.99■□□□□ 0.15
SREK1-211ENST00000522214 FOXD4L1Q9NU39 408 aa15.98■□□□□ 0.15
SREK1-211ENST00000522214 ZBTB22O15209 634 aa15.89■□□□□ 0.13
SREK1-211ENST00000522214 SLC4A2P04920 1241 aa15.88■□□□□ 0.13
SREK1-211ENST00000522214 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.82■□□□□ 0.122e-8■□□□□ 9.3
SREK1-211ENST00000522214 RNF39Q9H2S5 420 aa15.75■□□□□ 0.11
SREK1-211ENST00000522214 CACNB1Q02641 598 aaPredicted RBP15.73■□□□□ 0.11
SREK1-211ENST00000522214 MYCNP04198 464 aaPredicted RBP15.69■□□□□ 0.1
SREK1-211ENST00000522214 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.56■□□□□ 0.08
SREK1-211ENST00000522214 HNRNPUL2Q1KMD3 747 aaKnown RBP15.56■□□□□ 0.08
SREK1-211ENST00000522214 U3KPZ7 1027 aaPredicted RBP15.53■□□□□ 0.08
SREK1-211ENST00000522214 C1QBPQ07021 282 aaKnown RBP15.5■□□□□ 0.07
SREK1-211ENST00000522214 ATXN8OSP0DMR3 200 aa15.47■□□□□ 0.07
SREK1-211ENST00000522214 SAMD1Q6SPF0 538 aaPredicted RBP15.47■□□□□ 0.07
SREK1-211ENST00000522214 APLP2Q06481 763 aa15.39■□□□□ 0.05
SREK1-211ENST00000522214 SPINK5Q9NQ38 1064 aaPredicted RBP15.18■□□□□ 0.02
SREK1-211ENST00000522214 CAPN15O75808 1086 aa15.15■□□□□ 0.02
SREK1-211ENST00000522214 ATF5Q9Y2D1 282 aaPredicted RBP15.1■□□□□ 0.01
SREK1-211ENST00000522214 ZNF219Q9P2Y4 722 aaPredicted RBP15.07■□□□□ 0
SREK1-211ENST00000522214 TRHP20396 242 aaPredicted RBP15.01□□□□□ -0.01
SREK1-211ENST00000522214 DSG3P32926 999 aa14.89□□□□□ -0.03
SREK1-211ENST00000522214 ABCB7O75027 752 aa14.87□□□□□ -0.03
SREK1-211ENST00000522214 POLA2Q14181 598 aa14.75□□□□□ -0.05
SREK1-211ENST00000522214 ZBTB12Q9Y330 459 aaPredicted RBP14.67□□□□□ -0.06
SREK1-211ENST00000522214 FBLN2P98095 1184 aa14.64□□□□□ -0.07
SREK1-211ENST00000522214 MKRN4PQ13434 485 aaPredicted RBP14.49□□□□□ -0.09
SREK1-211ENST00000522214 FKBP8Q14318 412 aa14.48□□□□□ -0.09
SREK1-211ENST00000522214 SPDYE4A6NLX3 237 aa14.33□□□□□ -0.12
SREK1-211ENST00000522214 SPDYE2BA6NHP3 402 aa14.24□□□□□ -0.13
SREK1-211ENST00000522214 SPDYE6P0CI01 402 aa14.24□□□□□ -0.13
SREK1-211ENST00000522214 SPDYE2Q495Y8 402 aa14.24□□□□□ -0.13
SREK1-211ENST00000522214 OSCARQ8IYS5 282 aa14.23□□□□□ -0.13
SREK1-211ENST00000522214 ZNF692Q9BU19 519 aaPredicted RBP14.16□□□□□ -0.14
SREK1-211ENST00000522214 RBM42Q9BTD8 480 aaKnown RBP14.13□□□□□ -0.15
SREK1-211ENST00000522214 PROM2Q8N271 834 aa14.12□□□□□ -0.15
SREK1-211ENST00000522214 SSUH2Q9Y2M2 353 aa14.1□□□□□ -0.15
SREK1-211ENST00000522214 FBXO3Q9UK99 471 aa14.04□□□□□ -0.16
SREK1-211ENST00000522214 PABPN1Q86U42 306 aaKnown RBP eCLIP13.95□□□□□ -0.182e-9■□□□□ 8.9
SREK1-211ENST00000522214 AKT1S1Q96B36 256 aa13.94□□□□□ -0.18
SREK1-211ENST00000522214 STAG3Q9UJ98 1225 aa13.88□□□□□ -0.19
SREK1-211ENST00000522214 REM2Q8IYK8 340 aaPredicted RBP13.82□□□□□ -0.2
SREK1-211ENST00000522214 POTEHQ6S545 545 aa13.79□□□□□ -0.2
SREK1-211ENST00000522214 CHRDL2Q6WN34 429 aa13.78□□□□□ -0.2
SREK1-211ENST00000522214 SPDYE1Q8NFV5 336 aaPredicted RBP13.78□□□□□ -0.2
SREK1-211ENST00000522214 VASPP50552 380 aaPredicted RBP13.76□□□□□ -0.21
SREK1-211ENST00000522214 PITPNM1O00562 1244 aa13.69□□□□□ -0.22
SREK1-211ENST00000522214 CLEC11AQ9Y240 323 aa13.65□□□□□ -0.22
SREK1-211ENST00000522214 PLEKHG5O94827 1062 aa13.61□□□□□ -0.23
SREK1-211ENST00000522214 PLCD3Q8N3E9 789 aa13.6□□□□□ -0.23
SREK1-211ENST00000522214 AMER1Q5JTC6 1135 aaPredicted RBP13.59□□□□□ -0.23
SREK1-211ENST00000522214 PRR29P0C7W0 189 aa13.57□□□□□ -0.24
SREK1-211ENST00000522214 MIER1Q8N108 512 aa13.57□□□□□ -0.24
SREK1-211ENST00000522214 IFNLR1Q8IU57 520 aaPredicted RBP13.53□□□□□ -0.24
SREK1-211ENST00000522214 PIP4P2Q8N4L2 257 aa13.53□□□□□ -0.24
SREK1-211ENST00000522214 ZBTB47Q9UFB7 747 aaPredicted RBP13.53□□□□□ -0.24
SREK1-211ENST00000522214 KLHL34Q8N239 644 aa13.49□□□□□ -0.25
SREK1-211ENST00000522214 FXR2P51116 673 aaKnown RBP eCLIP13.43□□□□□ -0.265e-7■■□□□ 12.1
SREK1-211ENST00000522214 SPOCK2Q92563 424 aa13.42□□□□□ -0.26
SREK1-211ENST00000522214 RTN4Q9NQC3 1192 aaKnown RBP13.41□□□□□ -0.26
SREK1-211ENST00000522214 CREBZFQ9NS37 354 aa13.38□□□□□ -0.27
SREK1-211ENST00000522214 PRKAR2AP13861 404 aaKnown RBP13.36□□□□□ -0.27
SREK1-211ENST00000522214 CHADLQ6NUI6 762 aa13.36□□□□□ -0.27
SREK1-211ENST00000522214 NPM1P06748 294 aaKnown RBP eCLIP13.29□□□□□ -0.28
SREK1-211ENST00000522214 HAX1O00165 279 aa13.28□□□□□ -0.28
SREK1-211ENST00000522214 MNX1P50219 401 aaPredicted RBP13.25□□□□□ -0.29
SREK1-211ENST00000522214 NUBP1P53384 320 aa13.18□□□□□ -0.3
SREK1-211ENST00000522214 GSE1Q14687 1217 aa13.18□□□□□ -0.3
SREK1-211ENST00000522214 FARP1Q9Y4F1 1045 aaPredicted RBP13.18□□□□□ -0.3
SREK1-211ENST00000522214 TRIM41Q8WV44 630 aa13.15□□□□□ -0.3
SREK1-211ENST00000522214 FAM212AQ96EL1 285 aa13.15□□□□□ -0.3
SREK1-211ENST00000522214 EVX2Q03828 476 aa13.14□□□□□ -0.31
SREK1-211ENST00000522214 PKD2Q13563 968 aa13.14□□□□□ -0.31
SREK1-211ENST00000522214 CIZ1Q9ULV3 898 aaPredicted RBP13.14□□□□□ -0.31
SREK1-211ENST00000522214 DCAF8Q5TAQ9 597 aa13.09□□□□□ -0.31
SREK1-211ENST00000522214 ECM2O94769 699 aaPredicted RBP13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 146.8 ms