Protein–RNA interactions for Protein: O95749

GGPS1, Geranylgeranyl pyrophosphate synthase, humanhuman

Predictions only

Length 300 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GGPS1O95749 WT1-210ENST00000639563 1494 ntAPPRIS ALT2 TSL 1 (best) BASIC24.79■■□□□ 1.56
GGPS1O95749 PRKCZ-AS1-201ENST00000333854 1253 ntTSL 2 BASIC24.79■■□□□ 1.56
GGPS1O95749 GADD45A-201ENST00000370985 803 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
GGPS1O95749 NT5C3AP1-201ENST00000394500 1012 ntBASIC24.79■■□□□ 1.56
GGPS1O95749 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
GGPS1O95749 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
GGPS1O95749 ZFAS1-206ENST00000450535 1075 ntTSL 3 BASIC24.79■■□□□ 1.56
GGPS1O95749 AC108002.2-201ENST00000519782 340 ntTSL 4 BASIC24.79■■□□□ 1.56
GGPS1O95749 LINC02136-201ENST00000567469 530 ntTSL 4 BASIC24.79■■□□□ 1.56
GGPS1O95749 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
GGPS1O95749 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC24.79■■□□□ 1.56
GGPS1O95749 MPST-204ENST00000404393 1329 ntTSL 5 BASIC24.79■■□□□ 1.56
GGPS1O95749 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
GGPS1O95749 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC24.79■■□□□ 1.56
GGPS1O95749 ZMYND11-210ENST00000403354 1664 ntTSL 5 BASIC24.78■■□□□ 1.56
GGPS1O95749 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
GGPS1O95749 TMEM44-202ENST00000347147 2245 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
GGPS1O95749 P4HA3-201ENST00000331597 2274 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
GGPS1O95749 SPI1-201ENST00000227163 1168 ntAPPRIS ALT1 TSL 2 BASIC24.78■■□□□ 1.56
GGPS1O95749 UBE2J2-203ENST00000360466 1047 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
GGPS1O95749 POLR2F-203ENST00000407936 582 ntTSL 3 BASIC24.78■■□□□ 1.56
GGPS1O95749 POLR2F-207ENST00000460648 518 ntTSL 4 BASIC24.78■■□□□ 1.56
GGPS1O95749 ATOX1-207ENST00000524142 749 ntAPPRIS P1 TSL 5 BASIC24.78■■□□□ 1.56
GGPS1O95749 AC061979.1-201ENST00000532061 434 ntTSL 5 BASIC24.78■■□□□ 1.56
GGPS1O95749 AP2S1-203ENST00000593442 636 ntTSL 2 BASIC24.78■■□□□ 1.56
GGPS1O95749 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
GGPS1O95749 PLEKHF1-204ENST00000592810 1357 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
GGPS1O95749 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
GGPS1O95749 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC24.77■■□□□ 1.56
GGPS1O95749 EI24-211ENST00000534546 1544 ntTSL 2 BASIC24.77■■□□□ 1.56
GGPS1O95749 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC24.77■■□□□ 1.56
GGPS1O95749 CAPN10-207ENST00000391984 2644 ntAPPRIS P2 TSL 1 (best) BASIC24.77■■□□□ 1.56
GGPS1O95749 AGTR1-203ENST00000404754 2252 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
GGPS1O95749 ATP5A1-220ENST00000593152 2258 ntTSL 2 BASIC24.77■■□□□ 1.56
GGPS1O95749 NPHS2-201ENST00000367615 1855 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
GGPS1O95749 BSPRY-201ENST00000374183 2339 ntAPPRIS P1 TSL 1 (best) BASIC24.77■■□□□ 1.56
GGPS1O95749 SLC25A39-201ENST00000225308 1607 ntAPPRIS P3 TSL 1 (best) BASIC24.76■■□□□ 1.55
GGPS1O95749 GP9-201ENST00000307395 889 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
GGPS1O95749 PTGDR-202ENST00000553372 1216 ntTSL 3 BASIC24.76■■□□□ 1.55
GGPS1O95749 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC24.76■■□□□ 1.55
GGPS1O95749 R3HDM4-201ENST00000361574 1815 ntAPPRIS P1 TSL 1 (best) BASIC24.76■■□□□ 1.55
GGPS1O95749 LINC02228-203ENST00000641970 1355 ntBASIC24.76■■□□□ 1.55
GGPS1O95749 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC24.76■■□□□ 1.55
GGPS1O95749 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC24.75■■□□□ 1.55
GGPS1O95749 EPM2A-209ENST00000638262 2679 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
GGPS1O95749 MOSPD3-202ENST00000379527 1016 ntAPPRIS P1 TSL 5 BASIC24.75■■□□□ 1.55
GGPS1O95749 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC24.75■■□□□ 1.55
GGPS1O95749 GLI4-210ENST00000523522 1297 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
GGPS1O95749 TSEN15-207ENST00000533373 618 ntTSL 2 BASIC24.75■■□□□ 1.55
GGPS1O95749 KRT18P14-201ENST00000534205 1250 ntBASIC24.75■■□□□ 1.55
GGPS1O95749 TERF1P2-201ENST00000583350 1212 ntBASIC24.75■■□□□ 1.55
GGPS1O95749 AC022517.1-201ENST00000592429 346 ntBASIC24.75■■□□□ 1.55
GGPS1O95749 FZD9-201ENST00000344575 2338 ntAPPRIS P1 BASIC24.75■■□□□ 1.55
GGPS1O95749 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
GGPS1O95749 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC24.75■■□□□ 1.55
GGPS1O95749 HOXD9-201ENST00000249499 1870 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
GGPS1O95749 ZNF837-202ENST00000597582 1969 ntAPPRIS P1 TSL 2 BASIC24.74■■□□□ 1.55
GGPS1O95749 EML2-209ENST00000587152 2763 ntAPPRIS ALT2 TSL 2 BASIC24.74■■□□□ 1.55
GGPS1O95749 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC24.74■■□□□ 1.55
GGPS1O95749 YJEFN3-203ENST00000514277 995 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
GGPS1O95749 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC24.74■■□□□ 1.55
GGPS1O95749 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC24.74■■□□□ 1.55
GGPS1O95749 ELANE-202ENST00000590230 1028 ntAPPRIS P1 TSL 5 BASIC24.74■■□□□ 1.55
GGPS1O95749 IKBKGP1-201ENST00000612193 1073 ntBASIC24.74■■□□□ 1.55
GGPS1O95749 AP1S1-201ENST00000337619 1306 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
GGPS1O95749 GSR-204ENST00000537535 1323 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
GGPS1O95749 MAP2K5-204ENST00000395476 1689 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
GGPS1O95749 HMGA2-206ENST00000536545 1788 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
GGPS1O95749 B4GAT1-201ENST00000311181 2072 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
GGPS1O95749 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC24.74■■□□□ 1.55
GGPS1O95749 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC24.73■■□□□ 1.55
GGPS1O95749 SRXN1-201ENST00000381962 2698 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
GGPS1O95749 LTK-203ENST00000453182 2412 ntTSL 2 BASIC24.73■■□□□ 1.55
GGPS1O95749 RNPEP-202ENST00000367286 2282 ntTSL 5 BASIC24.73■■□□□ 1.55
GGPS1O95749 RAD9A-201ENST00000307980 2119 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
GGPS1O95749 NAE1-202ENST00000359087 1825 ntTSL 2 BASIC24.73■■□□□ 1.55
GGPS1O95749 MIS18A-201ENST00000290130 1575 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
GGPS1O95749 XPA-201ENST00000375128 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
GGPS1O95749 GADD45G-202ENST00000375769 977 ntTSL 2 BASIC24.73■■□□□ 1.55
GGPS1O95749 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC24.73■■□□□ 1.55
GGPS1O95749 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC24.73■■□□□ 1.55
GGPS1O95749 AC068587.7-201ENST00000641602 218 ntBASIC24.73■■□□□ 1.55
GGPS1O95749 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
GGPS1O95749 C5orf58-204ENST00000521850 2113 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
GGPS1O95749 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC24.73■■□□□ 1.55
GGPS1O95749 FAM120B-204ENST00000625626 1794 ntAPPRIS ALT2 TSL 2 BASIC24.72■■□□□ 1.55
GGPS1O95749 IL15RA-204ENST00000379977 1626 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
GGPS1O95749 ARRDC1-AS1-201ENST00000371417 1409 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
GGPS1O95749 SPI1-202ENST00000378538 1403 ntAPPRIS P3 TSL 1 (best) BASIC24.72■■□□□ 1.55
GGPS1O95749 CYB561D2-205ENST00000425346 1319 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
GGPS1O95749 DYRK3-203ENST00000367109 2163 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
GGPS1O95749 MFF-208ENST00000409616 1247 ntTSL 5 BASIC24.72■■□□□ 1.55
GGPS1O95749 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC24.72■■□□□ 1.55
GGPS1O95749 FRMD8-203ENST00000416776 1818 ntTSL 2 BASIC24.72■■□□□ 1.55
GGPS1O95749 HTATIP2-204ENST00000451739 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
GGPS1O95749 TADA2B-201ENST00000310074 4350 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
GGPS1O95749 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
GGPS1O95749 RNF208-201ENST00000391553 1077 ntAPPRIS P1 BASIC24.71■■□□□ 1.55
GGPS1O95749 RNF208-202ENST00000392827 1135 ntAPPRIS P1 TSL 5 BASIC24.71■■□□□ 1.55
GGPS1O95749 IMPDH1-210ENST00000480861 1765 ntAPPRIS P2 TSL 2 BASIC24.71■■□□□ 1.55
Retrieved 100 of 98,524 protein–RNA pairs in 51.5 ms