Protein–RNA interactions for Protein: O60939

SCN2B, Sodium channel subunit beta-2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2BO60939 AP003071.1-201ENST00000567925 622 ntTSL 3 BASIC12.43□□□□□ -0.42
SCN2BO60939 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SCN2BO60939 AC211476.2-201ENST00000608799 708 ntBASIC12.43□□□□□ -0.42
SCN2BO60939 FLT4-212ENST00000619105 3806 ntTSL 5 BASIC12.43□□□□□ -0.42
SCN2BO60939 YRDCP1-201ENST00000621419 643 ntBASIC12.43□□□□□ -0.42
SCN2BO60939 PSMD5-208ENST00000625444 219 ntTSL 5 BASIC12.43□□□□□ -0.42
SCN2BO60939 ZNF75D-202ENST00000370766 5592 ntAPPRIS P3 TSL 1 (best) BASIC12.43□□□□□ -0.42
SCN2BO60939 KDM7A-201ENST00000397560 9272 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
SCN2BO60939 XRCC3-202ENST00000553264 3018 ntAPPRIS P1 TSL 2 BASIC12.43□□□□□ -0.42
SCN2BO60939 CICP18-201ENST00000406017 2812 ntBASIC12.43□□□□□ -0.42
SCN2BO60939 AL606760.3-201ENST00000569869 3591 ntBASIC12.43□□□□□ -0.42
SCN2BO60939 SEC13-209ENST00000397117 1603 ntTSL 5 BASIC12.43□□□□□ -0.42
SCN2BO60939 HRH2-202ENST00000377291 2561 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SCN2BO60939 SGCA-201ENST00000262018 1432 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SCN2BO60939 AL845472.1-202ENST00000624675 4080 ntBASIC12.43□□□□□ -0.42
SCN2BO60939 PSD-202ENST00000406432 3861 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SCN2BO60939 LCMT2-201ENST00000305641 6957 ntAPPRIS P1 BASIC12.43□□□□□ -0.42
SCN2BO60939 ZNF44-202ENST00000355684 2119 ntAPPRIS P3 TSL 2 BASIC12.43□□□□□ -0.42
SCN2BO60939 SLC35A4-203ENST00000612662 2657 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SCN2BO60939 MARCH10-209ENST00000583600 3214 ntTSL 1 (best) BASIC12.43□□□□□ -0.42
SCN2BO60939 ZNF646-201ENST00000300850 6892 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SCN2BO60939 MYBPHL-201ENST00000357155 1372 ntAPPRIS P1 TSL 1 (best) BASIC12.43□□□□□ -0.42
SCN2BO60939 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC12.43□□□□□ -0.42
SCN2BO60939 AKNA-202ENST00000307564 7380 ntAPPRIS P2 TSL 1 (best) BASIC12.43□□□□□ -0.42
SCN2BO60939 SAP18-201ENST00000382533 2298 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SCN2BO60939 LITAF-203ENST00000413364 2292 ntTSL 2 BASIC12.42□□□□□ -0.42
SCN2BO60939 TMEM74B-201ENST00000381894 1730 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SCN2BO60939 SEC23B-201ENST00000262544 3176 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
SCN2BO60939 DMTF1-202ENST00000394703 4038 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SCN2BO60939 TRAPPC2L-211ENST00000565504 3102 ntTSL 2 BASIC12.42□□□□□ -0.42
SCN2BO60939 CASC4P1-201ENST00000456608 1312 ntBASIC12.42□□□□□ -0.42
SCN2BO60939 LINC01227-205ENST00000567317 1338 ntTSL 2 BASIC12.42□□□□□ -0.42
SCN2BO60939 ARF4-201ENST00000303436 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SCN2BO60939 DAPK1-201ENST00000358077 5743 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SCN2BO60939 MDH2-204ENST00000443006 2020 ntTSL 2 BASIC12.42□□□□□ -0.42
SCN2BO60939 CPEB1-212ENST00000616959 2009 ntTSL 2 BASIC12.42□□□□□ -0.42
SCN2BO60939 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SCN2BO60939 PHYHIP-201ENST00000321613 3099 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SCN2BO60939 PAX2-203ENST00000370296 4140 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SCN2BO60939 PAX2-205ENST00000428433 4126 ntTSL 5 BASIC12.42□□□□□ -0.42
SCN2BO60939 LOXL3-204ENST00000409549 2897 ntTSL 2 BASIC12.42□□□□□ -0.42
SCN2BO60939 HYLS1-201ENST00000356438 1810 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
SCN2BO60939 TRAF5-203ENST00000367004 1827 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SCN2BO60939 COL8A1-202ENST00000273342 3029 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
SCN2BO60939 DRAM1-201ENST00000258534 3519 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SCN2BO60939 SRRM2-AS1-201ENST00000382313 3523 ntTSL 2 BASIC12.42□□□□□ -0.42
SCN2BO60939 FLJ30679-201ENST00000624773 1980 ntBASIC12.42□□□□□ -0.42
SCN2BO60939 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SCN2BO60939 MORN2-201ENST00000340556 741 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SCN2BO60939 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC12.42□□□□□ -0.42
SCN2BO60939 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SCN2BO60939 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
SCN2BO60939 UFM1-202ENST00000379649 846 ntTSL 4 BASIC12.42□□□□□ -0.42
SCN2BO60939 NUPL2-202ENST00000410002 680 ntTSL 2 BASIC12.42□□□□□ -0.42
SCN2BO60939 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SCN2BO60939 ARSEP1-202ENST00000430152 499 ntTSL 3 BASIC12.42□□□□□ -0.42
SCN2BO60939 AL591242.1-203ENST00000434329 374 ntTSL 3 BASIC12.42□□□□□ -0.42
SCN2BO60939 IGHV3-43-201ENST00000434710 434 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
SCN2BO60939 UPF3AP2-201ENST00000457924 1132 ntBASIC12.42□□□□□ -0.42
SCN2BO60939 ZNF527-203ENST00000483919 1142 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SCN2BO60939 TBC1D3P6-201ENST00000505954 962 ntBASIC12.42□□□□□ -0.42
SCN2BO60939 RPS23-207ENST00000511844 530 ntTSL 2 BASIC12.42□□□□□ -0.42
SCN2BO60939 IGLVI-63-201ENST00000524184 384 ntBASIC12.42□□□□□ -0.42
SCN2BO60939 LINC02205-201ENST00000559752 239 ntTSL 5 BASIC12.42□□□□□ -0.42
SCN2BO60939 CARHSP1-208ENST00000567554 598 ntAPPRIS P1 TSL 2 BASIC12.42□□□□□ -0.42
SCN2BO60939 AC005696.1-201ENST00000572876 443 ntTSL 2 BASIC12.42□□□□□ -0.42
SCN2BO60939 AC012146.4-201ENST00000575546 271 ntBASIC12.42□□□□□ -0.42
SCN2BO60939 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SCN2BO60939 AL353622.2-201ENST00000605846 425 ntBASIC12.42□□□□□ -0.42
SCN2BO60939 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC12.42□□□□□ -0.42
SCN2BO60939 RAB5B-211ENST00000628569 496 ntTSL 5 BASIC12.42□□□□□ -0.42
SCN2BO60939 HCFC1-202ENST00000369984 8375 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
SCN2BO60939 HERC2P3-208ENST00000430598 4279 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SCN2BO60939 OR2V2-202ENST00000641492 4777 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
SCN2BO60939 ASCC3-203ENST00000369143 3433 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SCN2BO60939 BCL2L13-202ENST00000337612 4905 ntTSL 2 BASIC12.42□□□□□ -0.42
SCN2BO60939 SLC26A6-205ENST00000395550 2589 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
SCN2BO60939 PDE9A-201ENST00000291539 2058 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SCN2BO60939 TBC1D3B-202ENST00000611257 2081 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SCN2BO60939 HIST1H2BH-201ENST00000619466 2060 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
SCN2BO60939 COL19A1-205ENST00000620364 6233 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SCN2BO60939 MAGED1-201ENST00000326587 2747 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SCN2BO60939 DPAGT1-201ENST00000354202 2205 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SCN2BO60939 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SCN2BO60939 A1BG-AS1-203ENST00000594950 1718 ntTSL 2 BASIC12.42□□□□□ -0.42
SCN2BO60939 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SCN2BO60939 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
SCN2BO60939 LDB3-203ENST00000372056 1868 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SCN2BO60939 RAD1-203ENST00000382038 5770 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SCN2BO60939 INCA1-201ENST00000355025 1383 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
SCN2BO60939 SERPINB6-206ENST00000380546 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SCN2BO60939 MTHFR-202ENST00000376583 7044 ntAPPRIS ALT1 TSL 5 BASIC12.42□□□□□ -0.42
SCN2BO60939 BET1-201ENST00000222547 1504 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SCN2BO60939 FAM117A-209ENST00000513602 1522 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
SCN2BO60939 MAP2K6-205ENST00000589647 1512 ntTSL 5 BASIC12.42□□□□□ -0.42
SCN2BO60939 HNF4A-204ENST00000415691 2302 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SCN2BO60939 DCLRE1C-208ENST00000378258 2463 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
SCN2BO60939 MDM1-204ENST00000411698 2472 ntAPPRIS ALT2 TSL 2 BASIC12.42□□□□□ -0.42
SCN2BO60939 CYP4F12-201ENST00000324632 1687 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
SCN2BO60939 RASAL2-201ENST00000367649 4378 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 41.7 ms