RNA–Protein interactions for RNA: ENST00000367004.3

TRAF5-203, Transcript of TNF receptor associated factor 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF5, Length 1,827 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF5-203ENST00000367004 NISCHQ9Y2I1 1504 aa27.05■■□□□ 1.92
TRAF5-203ENST00000367004 CCDC180Q9P1Z9 1646 aa23.18■■□□□ 1.3
TRAF5-203ENST00000367004 ZCCHC6Q5VYS8 1495 aaKnown RBP22.89■■□□□ 1.25
TRAF5-203ENST00000367004 SHROOM4Q9ULL8 1493 aa22.72■■□□□ 1.23
TRAF5-203ENST00000367004 DCAF1Q9Y4B6 1507 aa22.31■■□□□ 1.16
TRAF5-203ENST00000367004 SUPT5HO00267 1087 aaKnown RBP22.23■■□□□ 1.15
TRAF5-203ENST00000367004 DCAF8L2P0C7V8 631 aa22.12■■□□□ 1.13
TRAF5-203ENST00000367004 MYO15BQ96JP2 1530 aa21.72■■□□□ 1.07
TRAF5-203ENST00000367004 CHIC1Q5VXU3 224 aa21.69■■□□□ 1.06
TRAF5-203ENST00000367004 ABCC9O60706 1549 aa21.59■■□□□ 1.05
TRAF5-203ENST00000367004 SCRIBQ14160 1630 aa21.51■■□□□ 1.03
TRAF5-203ENST00000367004 NACADO15069 1562 aa21.39■■□□□ 1.01
TRAF5-203ENST00000367004 RSF1Q96T23 1441 aaPredicted RBP21.32■■□□□ 1
TRAF5-203ENST00000367004 RB1CC1Q8TDY2 1594 aa21.14■□□□□ 0.97
TRAF5-203ENST00000367004 CECR2Q9BXF3 1484 aa21.01■□□□□ 0.95
TRAF5-203ENST00000367004 MROH2BQ7Z745 1585 aa20.98■□□□□ 0.95
TRAF5-203ENST00000367004 LOC105371045A0A1W2PR82 267 aa20.94■□□□□ 0.94
TRAF5-203ENST00000367004 HRCP23327 699 aa20.88■□□□□ 0.93
TRAF5-203ENST00000367004 WIZO95785 1651 aa20.87■□□□□ 0.93
TRAF5-203ENST00000367004 BAZ1AQ9NRL2 1556 aaPredicted RBP20.81■□□□□ 0.92
TRAF5-203ENST00000367004 PCGF6Q9BYE7 350 aa20.81■□□□□ 0.92
TRAF5-203ENST00000367004 TRIM41Q8WV44 630 aa20.79■□□□□ 0.92
TRAF5-203ENST00000367004 UNC13AQ9UPW8 1703 aa20.73■□□□□ 0.91
TRAF5-203ENST00000367004 EIF4G1Q04637 1599 aaKnown RBP20.66■□□□□ 0.9
TRAF5-203ENST00000367004 SMARCA4P51532 1647 aa20.64■□□□□ 0.89
TRAF5-203ENST00000367004 TOP2AP11388 1531 aaKnown RBP20.61■□□□□ 0.89
TRAF5-203ENST00000367004 TRIM26Q12899 539 aaPredicted RBP20.57■□□□□ 0.88
TRAF5-203ENST00000367004 FAM9AQ8IZU1 332 aaPredicted RBP20.5■□□□□ 0.87
TRAF5-203ENST00000367004 SMARCA2P51531 1590 aa20.47■□□□□ 0.87
TRAF5-203ENST00000367004 BICRAQ9NZM4 1560 aa20.45■□□□□ 0.86
TRAF5-203ENST00000367004 CCDC88BA6NC98 1476 aa20.44■□□□□ 0.86
TRAF5-203ENST00000367004 PPARGC1BQ86YN6 1023 aaKnown RBP20.32■□□□□ 0.84
TRAF5-203ENST00000367004 PEG3Q9GZU2 1588 aa20.31■□□□□ 0.84
TRAF5-203ENST00000367004 ABCC8Q09428 1581 aa20.3■□□□□ 0.84
TRAF5-203ENST00000367004 PABPN1Q86U42 306 aaKnown RBP eCLIP20.25■□□□□ 0.83
TRAF5-203ENST00000367004 EHMT2Q96KQ7 1210 aa20.23■□□□□ 0.83
TRAF5-203ENST00000367004 ZEB1P37275 1124 aaPredicted RBP20.13■□□□□ 0.81
TRAF5-203ENST00000367004 EEA1Q15075 1411 aa20.12■□□□□ 0.81
TRAF5-203ENST00000367004 ATAD2BQ9ULI0 1458 aa20.09■□□□□ 0.81
TRAF5-203ENST00000367004 SOGA1O94964 1423 aa20.08■□□□□ 0.8
TRAF5-203ENST00000367004 WRNQ14191 1432 aaPredicted RBP eCLIP20.03■□□□□ 0.8
TRAF5-203ENST00000367004 TNIKQ9UKE5 1360 aa20.01■□□□□ 0.79
TRAF5-203ENST00000367004 BAZ1BQ9UIG0 1483 aaKnown RBP20.01■□□□□ 0.79
TRAF5-203ENST00000367004 RUSC2Q8N2Y8 1516 aa19.99■□□□□ 0.79
TRAF5-203ENST00000367004 CEP162Q5TB80 1403 aa19.98■□□□□ 0.79
TRAF5-203ENST00000367004 CSRNP3Q8WYN3 585 aa19.97■□□□□ 0.79
TRAF5-203ENST00000367004 SYNJ1O43426 1573 aa19.95■□□□□ 0.78
TRAF5-203ENST00000367004 GOLGA3Q08378 1498 aa19.91■□□□□ 0.78
TRAF5-203ENST00000367004 KIF21BO75037 1637 aa19.85■□□□□ 0.77
TRAF5-203ENST00000367004 CEP164Q9UPV0 1460 aa19.82■□□□□ 0.76
TRAF5-203ENST00000367004 UBTFP17480 764 aaKnown RBP19.79■□□□□ 0.76
TRAF5-203ENST00000367004 HMGXB3Q12766 1538 aa19.78■□□□□ 0.76
TRAF5-203ENST00000367004 TOP2BQ02880 1626 aa19.77■□□□□ 0.75
TRAF5-203ENST00000367004 DNAJC5BQ9UF47 199 aa19.75■□□□□ 0.75
TRAF5-203ENST00000367004 NCAPD3P42695 1498 aa19.75■□□□□ 0.75
TRAF5-203ENST00000367004 BIVM-ERCC5R4GMW8 1640 aa19.74■□□□□ 0.75
TRAF5-203ENST00000367004 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.65■□□□□ 0.74
TRAF5-203ENST00000367004 CLIP1P30622 1438 aa19.63■□□□□ 0.73
TRAF5-203ENST00000367004 CCER1Q8TC90 406 aaPredicted RBP19.62■□□□□ 0.73
TRAF5-203ENST00000367004 RAPGEF2Q9Y4G8 1499 aa19.62■□□□□ 0.73
TRAF5-203ENST00000367004 TTBK1Q5TCY1 1321 aaPredicted RBP19.58■□□□□ 0.73
TRAF5-203ENST00000367004 VPS8Q8N3P4 1428 aa19.57■□□□□ 0.72
TRAF5-203ENST00000367004 ERICH3Q5RHP9 1530 aa19.56■□□□□ 0.72
TRAF5-203ENST00000367004 CUX1P39880 1505 aa19.55■□□□□ 0.72
TRAF5-203ENST00000367004 CFTRP13569 1480 aa19.55■□□□□ 0.72
TRAF5-203ENST00000367004 PRDM2Q13029 1718 aa19.52■□□□□ 0.72
TRAF5-203ENST00000367004 PRXQ9BXM0 1461 aa19.52■□□□□ 0.72
TRAF5-203ENST00000367004 KIF27Q86VH2 1401 aa19.42■□□□□ 0.7
TRAF5-203ENST00000367004 ARAP1Q96P48 1450 aa19.37■□□□□ 0.69
TRAF5-203ENST00000367004 APLP2Q06481 763 aa19.36■□□□□ 0.69
TRAF5-203ENST00000367004 CADPSQ9ULU8 1353 aa19.31■□□□□ 0.68
TRAF5-203ENST00000367004 RANGAP1P46060 587 aaPredicted RBP19.28■□□□□ 0.68
TRAF5-203ENST00000367004 CC2D2AQ9P2K1 1620 aa19.28■□□□□ 0.68
TRAF5-203ENST00000367004 HNRNPUL2Q1KMD3 747 aaKnown RBP19.27■□□□□ 0.68
TRAF5-203ENST00000367004 CUX2O14529 1486 aa19.22■□□□□ 0.67
TRAF5-203ENST00000367004 ARHGAP35Q9NRY4 1499 aa19.21■□□□□ 0.67
TRAF5-203ENST00000367004 DIEXFQ68CQ4 756 aaKnown RBP19.21■□□□□ 0.67
TRAF5-203ENST00000367004 FGD5Q6ZNL6 1462 aa19.2■□□□□ 0.66
TRAF5-203ENST00000367004 IGF1RP08069 1367 aa19.19■□□□□ 0.66
TRAF5-203ENST00000367004 ZNF316A6NFI3 1004 aaPredicted RBP19.15■□□□□ 0.66
TRAF5-203ENST00000367004 KANK4Q5T7N3 995 aaPredicted RBP19.14■□□□□ 0.65
TRAF5-203ENST00000367004 RRBP1Q9P2E9 1410 aaKnown RBP19.13■□□□□ 0.65
TRAF5-203ENST00000367004 FANCD2Q9BXW9 1451 aa19.12■□□□□ 0.65
TRAF5-203ENST00000367004 CARMIL1Q5VZK9 1371 aa19.1■□□□□ 0.65
TRAF5-203ENST00000367004 SCAF1Q9H7N4 1312 aaKnown RBP19.1■□□□□ 0.65
TRAF5-203ENST00000367004 DNMBPQ6XZF7 1577 aa19.09■□□□□ 0.65
TRAF5-203ENST00000367004 MAP3K1Q13233 1512 aa19.07■□□□□ 0.64
TRAF5-203ENST00000367004 CLSPNQ9HAW4 1339 aa19.05■□□□□ 0.64
TRAF5-203ENST00000367004 ABCA10Q8WWZ4 1543 aa19.02■□□□□ 0.64
TRAF5-203ENST00000367004 TIAM1Q13009 1591 aa19.02■□□□□ 0.64
TRAF5-203ENST00000367004 DHX57Q6P158 1386 aaKnown RBP19.01■□□□□ 0.63
TRAF5-203ENST00000367004 TOPBP1Q92547 1522 aa19.01■□□□□ 0.63
TRAF5-203ENST00000367004 ACIN1Q9UKV3 1341 aaKnown RBP19.01■□□□□ 0.63
TRAF5-203ENST00000367004 CCNB3Q8WWL7 1395 aa18.99■□□□□ 0.63
TRAF5-203ENST00000367004 POLA1P09884 1462 aaPredicted RBP18.98■□□□□ 0.63
TRAF5-203ENST00000367004 RAD54L2Q9Y4B4 1467 aa18.96■□□□□ 0.63
TRAF5-203ENST00000367004 NESP48681 1621 aa18.96■□□□□ 0.62
TRAF5-203ENST00000367004 CUL7Q14999 1698 aa18.95■□□□□ 0.62
TRAF5-203ENST00000367004 NEUROD1Q13562 356 aa18.95■□□□□ 0.62
TRAF5-203ENST00000367004 CFAP43Q8NDM7 1665 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms