Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 HERC2P3-208ENST00000430598 4279 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
RAB40CQ96S21 MAP1A-201ENST00000300231 10258 ntAPPRIS P2 TSL 5 BASIC10.74□□□□□ -0.69
RAB40CQ96S21 PAX6-201ENST00000241001 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC10.74□□□□□ -0.69
RAB40CQ96S21 MARCH8-204ENST00000453424 5638 ntTSL 1 (best) BASIC10.74□□□□□ -0.69
RAB40CQ96S21 PAK5-203ENST00000378429 4780 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
RAB40CQ96S21 AC010536.1-201ENST00000538868 2611 ntBASIC10.74□□□□□ -0.69
RAB40CQ96S21 HTR4-201ENST00000360693 3082 ntTSL 5 BASIC10.74□□□□□ -0.69
RAB40CQ96S21 PARN-203ENST00000437198 3078 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
RAB40CQ96S21 RNF150-206ENST00000515673 9805 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
RAB40CQ96S21 KCNC2-201ENST00000298972 3563 ntAPPRIS ALT2 TSL 5 BASIC10.74□□□□□ -0.69
RAB40CQ96S21 TSKU-203ENST00000527881 3554 ntAPPRIS P1 TSL 2 BASIC10.74□□□□□ -0.69
RAB40CQ96S21 CCDC129-201ENST00000319386 4544 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
RAB40CQ96S21 RBM4B-201ENST00000310046 1840 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
RAB40CQ96S21 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
RAB40CQ96S21 SH2D7-201ENST00000328828 2750 ntAPPRIS P1 TSL 5 BASIC10.74□□□□□ -0.69
RAB40CQ96S21 LTA-213ENST00000418386 1422 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
RAB40CQ96S21 MYL6-219ENST00000551589 1438 ntAPPRIS ALT1 TSL 2 BASIC10.74□□□□□ -0.69
RAB40CQ96S21 ATXN2L-203ENST00000340394 3807 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
RAB40CQ96S21 USP33-204ENST00000370794 4327 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
RAB40CQ96S21 PCNX2-203ENST00000344698 5348 ntAPPRIS ALT2 TSL 2 BASIC10.74□□□□□ -0.69
RAB40CQ96S21 PPP4R1-202ENST00000400555 3885 ntAPPRIS ALT2 TSL 1 (best) BASIC10.74□□□□□ -0.69
RAB40CQ96S21 GIMAP6-201ENST00000328902 3440 ntAPPRIS P3 TSL 1 (best) BASIC10.74□□□□□ -0.69
RAB40CQ96S21 CA6-205ENST00000480186 1493 ntTSL 2 BASIC10.74□□□□□ -0.69
RAB40CQ96S21 GREB1-201ENST00000234142 8444 ntAPPRIS P1 TSL 1 (best) BASIC10.74□□□□□ -0.69
RAB40CQ96S21 AC091948.1-201ENST00000501695 2033 ntTSL 2 BASIC10.74□□□□□ -0.69
RAB40CQ96S21 DPP3-211ENST00000532677 3078 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
RAB40CQ96S21 CCDC33-201ENST00000268082 2093 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
RAB40CQ96S21 RRAGA-201ENST00000380527 1589 ntAPPRIS P1 BASIC10.73□□□□□ -0.69
RAB40CQ96S21 SLC25A19-210ENST00000580994 1554 ntAPPRIS P1 TSL 5 BASIC10.73□□□□□ -0.69
RAB40CQ96S21 XAB2-201ENST00000358368 2667 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
RAB40CQ96S21 TUBA1B-202ENST00000336023 1627 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
RAB40CQ96S21 AC073862.3-201ENST00000624597 1648 ntBASIC10.73□□□□□ -0.69
RAB40CQ96S21 LINC01561-201ENST00000369071 2176 ntBASIC10.73□□□□□ -0.69
RAB40CQ96S21 C14orf159-219ENST00000521077 2719 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
RAB40CQ96S21 CHCHD7-201ENST00000303759 1684 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
RAB40CQ96S21 MEFV-203ENST00000536379 1713 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
RAB40CQ96S21 TNKS-213ENST00000522110 2900 ntBASIC10.73□□□□□ -0.69
RAB40CQ96S21 MKX-202ENST00000419761 3638 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
RAB40CQ96S21 DCLRE1C-208ENST00000378258 2463 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
RAB40CQ96S21 C16orf45-209ENST00000566490 1854 ntTSL 5 BASIC10.73□□□□□ -0.69
RAB40CQ96S21 PRIMA1-201ENST00000316227 1080 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
RAB40CQ96S21 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC10.73□□□□□ -0.69
RAB40CQ96S21 PAX4-201ENST00000338516 1085 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
RAB40CQ96S21 CSH2-202ENST00000345366 598 ntTSL 5 BASIC10.73□□□□□ -0.69
RAB40CQ96S21 DPM3-202ENST00000368399 517 ntBASIC10.73□□□□□ -0.69
RAB40CQ96S21 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC10.73□□□□□ -0.69
RAB40CQ96S21 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
RAB40CQ96S21 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
RAB40CQ96S21 LBH-202ENST00000401506 485 ntTSL 3 BASIC10.73□□□□□ -0.69
RAB40CQ96S21 SYNGR1-205ENST00000406293 564 ntTSL 2 BASIC10.73□□□□□ -0.69
RAB40CQ96S21 OR2W2P-201ENST00000406313 909 ntBASIC10.73□□□□□ -0.69
RAB40CQ96S21 MRPS25-203ENST00000444840 1281 ntTSL 2 BASIC10.73□□□□□ -0.69
RAB40CQ96S21 AC104306.2-201ENST00000451877 341 ntBASIC10.73□□□□□ -0.69
RAB40CQ96S21 TIMP1-205ENST00000456754 1095 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
RAB40CQ96S21 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC10.73□□□□□ -0.69
RAB40CQ96S21 HINT1-204ENST00000506908 681 ntTSL 2 BASIC10.73□□□□□ -0.69
RAB40CQ96S21 MARK2P5-201ENST00000507649 634 ntBASIC10.73□□□□□ -0.69
RAB40CQ96S21 NUDCD2-202ENST00000517501 448 ntTSL 5 BASIC10.73□□□□□ -0.69
RAB40CQ96S21 CSH2-206ENST00000560142 749 ntTSL 5 BASIC10.73□□□□□ -0.69
RAB40CQ96S21 AC013355.1-201ENST00000562625 723 ntBASIC10.73□□□□□ -0.69
RAB40CQ96S21 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC10.73□□□□□ -0.69
RAB40CQ96S21 SYT17-208ENST00000568433 812 ntTSL 3 BASIC10.73□□□□□ -0.69
RAB40CQ96S21 RN7SL219P-201ENST00000582872 296 ntBASIC10.73□□□□□ -0.69
RAB40CQ96S21 AC020897.1-201ENST00000587702 561 ntTSL 4 BASIC10.73□□□□□ -0.69
RAB40CQ96S21 AC092634.5-202ENST00000587736 928 ntTSL 2 BASIC10.73□□□□□ -0.69
RAB40CQ96S21 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC10.73□□□□□ -0.69
RAB40CQ96S21 SNRPD2-206ENST00000588301 702 ntAPPRIS P1 TSL 3 BASIC10.73□□□□□ -0.69
RAB40CQ96S21 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC10.73□□□□□ -0.69
RAB40CQ96S21 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
RAB40CQ96S21 AL358473.2-201ENST00000610411 556 ntTSL 4 BASIC10.73□□□□□ -0.69
RAB40CQ96S21 ALDOA-229ENST00000636698 420 ntTSL 3 BASIC10.73□□□□□ -0.69
RAB40CQ96S21 RIPK3-201ENST00000216274 1930 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
RAB40CQ96S21 ATF4P4-201ENST00000393544 1930 ntBASIC10.73□□□□□ -0.69
RAB40CQ96S21 CHGB-201ENST00000378961 2550 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
RAB40CQ96S21 ASPH-203ENST00000379454 5268 ntAPPRIS P3 TSL 1 (best) BASIC10.73□□□□□ -0.69
RAB40CQ96S21 APTX-211ENST00000463596 1345 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
RAB40CQ96S21 BAG5-203ENST00000445922 4867 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
RAB40CQ96S21 NOSTRIN-203ENST00000397209 1437 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
RAB40CQ96S21 AC007431.1-201ENST00000578662 1412 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
RAB40CQ96S21 ARHGEF9-218ENST00000624843 2154 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
RAB40CQ96S21 OTOG-202ENST00000399391 8778 ntAPPRIS ALT2 TSL 5 BASIC10.73□□□□□ -0.69
RAB40CQ96S21 CANX-209ENST00000504734 2232 ntAPPRIS P1 TSL 2 BASIC10.73□□□□□ -0.69
RAB40CQ96S21 PRAMENP-201ENST00000337471 3038 ntTSL 2 BASIC10.73□□□□□ -0.69
RAB40CQ96S21 TFDP2-215ENST00000489671 9857 ntAPPRIS ALT2 TSL 1 (best) BASIC10.73□□□□□ -0.69
RAB40CQ96S21 WT1-AS-201ENST00000395900 3828 ntTSL 2 BASIC10.73□□□□□ -0.69
RAB40CQ96S21 FBLN1-203ENST00000340923 2348 ntTSL 1 (best) BASIC10.73□□□□□ -0.69
RAB40CQ96S21 EPB41L4A-201ENST00000261486 4707 ntAPPRIS P1 TSL 1 (best) BASIC10.73□□□□□ -0.69
RAB40CQ96S21 ELP4-212ENST00000638764 2456 ntTSL 5 BASIC10.73□□□□□ -0.69
RAB40CQ96S21 RAB43-204ENST00000393307 4203 ntAPPRIS P1 TSL 4 BASIC10.73□□□□□ -0.69
RAB40CQ96S21 IGHG2-202ENST00000641095 2594 ntAPPRIS P1 BASIC10.72□□□□□ -0.69
RAB40CQ96S21 PRPF18-202ENST00000378572 1717 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RAB40CQ96S21 TMEM86A-201ENST00000280734 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.72□□□□□ -0.69
RAB40CQ96S21 SPCS2-209ENST00000610881 2711 ntAPPRIS ALT2 TSL 5 BASIC10.72□□□□□ -0.69
RAB40CQ96S21 AC053503.6-201ENST00000623864 1843 ntBASIC10.72□□□□□ -0.69
RAB40CQ96S21 GPR161-208ENST00000537209 8256 ntTSL 2 BASIC10.72□□□□□ -0.69
RAB40CQ96S21 LAMP2-201ENST00000200639 1867 ntAPPRIS P5 TSL 1 (best) BASIC10.72□□□□□ -0.69
RAB40CQ96S21 NDEL1-203ENST00000402554 1858 ntTSL 5 BASIC10.72□□□□□ -0.69
RAB40CQ96S21 FRMD1-205ENST00000440994 2857 ntAPPRIS ALT2 TSL 2 BASIC10.72□□□□□ -0.69
RAB40CQ96S21 CYP4F11-205ENST00000620614 2908 ntTSL 5 BASIC10.72□□□□□ -0.69
RAB40CQ96S21 MINK1-203ENST00000453408 3939 ntAPPRIS ALT2 TSL 1 (best) BASIC10.72□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 195.7 ms