RNA–Protein interactions for RNA: ENST00000268082.4

CCDC33-201, Transcript of coiled-coil domain containing 33, humanhuman

TSL 1 (best) BASIC

Gene CCDC33, Length 2,093 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33-201ENST00000268082 NISCHQ9Y2I1 1504 aa26.83■■□□□ 1.89
CCDC33-201ENST00000268082 CCDC180Q9P1Z9 1646 aa23.21■■□□□ 1.31
CCDC33-201ENST00000268082 ABCC9O60706 1549 aa22.92■■□□□ 1.26
CCDC33-201ENST00000268082 ZCCHC6Q5VYS8 1495 aaKnown RBP22.72■■□□□ 1.23
CCDC33-201ENST00000268082 SHROOM4Q9ULL8 1493 aa22.37■■□□□ 1.17
CCDC33-201ENST00000268082 DCAF1Q9Y4B6 1507 aa22.21■■□□□ 1.15
CCDC33-201ENST00000268082 DCAF8L2P0C7V8 631 aa22.13■■□□□ 1.13
CCDC33-201ENST00000268082 RB1CC1Q8TDY2 1594 aa21.87■■□□□ 1.09
CCDC33-201ENST00000268082 SUPT5HO00267 1087 aaKnown RBP21.87■■□□□ 1.09
CCDC33-201ENST00000268082 NACADO15069 1562 aa21.8■■□□□ 1.08
CCDC33-201ENST00000268082 MYO15BQ96JP2 1530 aa21.64■■□□□ 1.05
CCDC33-201ENST00000268082 UNC13AQ9UPW8 1703 aa21.56■■□□□ 1.04
CCDC33-201ENST00000268082 PABPN1Q86U42 306 aaKnown RBP eCLIP21.47■■□□□ 1.03
CCDC33-201ENST00000268082 SCRIBQ14160 1630 aa21.39■■□□□ 1.01
CCDC33-201ENST00000268082 CHIC1Q5VXU3 224 aa21.38■■□□□ 1.01
CCDC33-201ENST00000268082 BICRAQ9NZM4 1560 aa21.3■■□□□ 1
CCDC33-201ENST00000268082 RSF1Q96T23 1441 aaPredicted RBP21.08■□□□□ 0.97
CCDC33-201ENST00000268082 DNAJC5BQ9UF47 199 aa21.07■□□□□ 0.96
CCDC33-201ENST00000268082 CECR2Q9BXF3 1484 aa20.77■□□□□ 0.92
CCDC33-201ENST00000268082 MROH2BQ7Z745 1585 aa20.77■□□□□ 0.92
CCDC33-201ENST00000268082 EIF4G1Q04637 1599 aaKnown RBP20.71■□□□□ 0.91
CCDC33-201ENST00000268082 WIZO95785 1651 aa20.71■□□□□ 0.91
CCDC33-201ENST00000268082 BAZ1AQ9NRL2 1556 aaPredicted RBP20.7■□□□□ 0.9
CCDC33-201ENST00000268082 CC2D2AQ9P2K1 1620 aa20.67■□□□□ 0.9
CCDC33-201ENST00000268082 LOC105371045A0A1W2PR82 267 aa20.57■□□□□ 0.88
CCDC33-201ENST00000268082 HRCP23327 699 aa20.56■□□□□ 0.88
CCDC33-201ENST00000268082 SMARCA4P51532 1647 aa20.52■□□□□ 0.88
CCDC33-201ENST00000268082 TRIM41Q8WV44 630 aa20.5■□□□□ 0.87
CCDC33-201ENST00000268082 PCGF6Q9BYE7 350 aa20.47■□□□□ 0.87
CCDC33-201ENST00000268082 TOP2AP11388 1531 aaKnown RBP20.47■□□□□ 0.87
CCDC33-201ENST00000268082 SMARCA2P51531 1590 aa20.32■□□□□ 0.84
CCDC33-201ENST00000268082 TRIM26Q12899 539 aaPredicted RBP20.28■□□□□ 0.84
CCDC33-201ENST00000268082 PEG3Q9GZU2 1588 aa20.23■□□□□ 0.83
CCDC33-201ENST00000268082 CCDC88BA6NC98 1476 aa20.23■□□□□ 0.83
CCDC33-201ENST00000268082 ATAD2BQ9ULI0 1458 aa20.22■□□□□ 0.83
CCDC33-201ENST00000268082 FAM9AQ8IZU1 332 aaPredicted RBP20.15■□□□□ 0.82
CCDC33-201ENST00000268082 NCAPD3P42695 1498 aa20.13■□□□□ 0.81
CCDC33-201ENST00000268082 ABCC8Q09428 1581 aa20.11■□□□□ 0.81
CCDC33-201ENST00000268082 BAZ1BQ9UIG0 1483 aaKnown RBP20.06■□□□□ 0.8
CCDC33-201ENST00000268082 HMGXB3Q12766 1538 aa20.03■□□□□ 0.8
CCDC33-201ENST00000268082 EEA1Q15075 1411 aa19.96■□□□□ 0.79
CCDC33-201ENST00000268082 PPARGC1BQ86YN6 1023 aaKnown RBP19.93■□□□□ 0.78
CCDC33-201ENST00000268082 ZEB1P37275 1124 aaPredicted RBP19.89■□□□□ 0.77
CCDC33-201ENST00000268082 NESP48681 1621 aa19.86■□□□□ 0.77
CCDC33-201ENST00000268082 WRNQ14191 1432 aaPredicted RBP eCLIP19.84■□□□□ 0.77
CCDC33-201ENST00000268082 EHMT2Q96KQ7 1210 aa19.82■□□□□ 0.76
CCDC33-201ENST00000268082 SOGA1O94964 1423 aa19.82■□□□□ 0.76
CCDC33-201ENST00000268082 TNIKQ9UKE5 1360 aa19.79■□□□□ 0.76
CCDC33-201ENST00000268082 SYNJ1O43426 1573 aa19.79■□□□□ 0.76
CCDC33-201ENST00000268082 CEP162Q5TB80 1403 aa19.76■□□□□ 0.75
CCDC33-201ENST00000268082 KIF21BO75037 1637 aa19.75■□□□□ 0.75
CCDC33-201ENST00000268082 GOLGA3Q08378 1498 aa19.74■□□□□ 0.75
CCDC33-201ENST00000268082 RUSC2Q8N2Y8 1516 aa19.73■□□□□ 0.75
CCDC33-201ENST00000268082 CSRNP3Q8WYN3 585 aa19.71■□□□□ 0.75
CCDC33-201ENST00000268082 ERCC6Q03468 1493 aa19.67■□□□□ 0.74
CCDC33-201ENST00000268082 BIVM-ERCC5R4GMW8 1640 aa19.67■□□□□ 0.74
CCDC33-201ENST00000268082 TOP2BQ02880 1626 aa19.65■□□□□ 0.74
CCDC33-201ENST00000268082 CEP164Q9UPV0 1460 aa19.65■□□□□ 0.74
CCDC33-201ENST00000268082 LAMC3Q9Y6N6 1575 aa19.61■□□□□ 0.73
CCDC33-201ENST00000268082 KIF21AQ7Z4S6 1674 aa19.61■□□□□ 0.73
CCDC33-201ENST00000268082 CADPSQ9ULU8 1353 aa19.58■□□□□ 0.73
CCDC33-201ENST00000268082 PRDM2Q13029 1718 aa19.57■□□□□ 0.72
CCDC33-201ENST00000268082 UBTFP17480 764 aaKnown RBP19.5■□□□□ 0.71
CCDC33-201ENST00000268082 PDS5BQ9NTI5 1447 aa19.47■□□□□ 0.71
CCDC33-201ENST00000268082 CFTRP13569 1480 aa19.46■□□□□ 0.71
CCDC33-201ENST00000268082 THOC2Q8NI27 1593 aaKnown RBP19.45■□□□□ 0.7
CCDC33-201ENST00000268082 ERICH3Q5RHP9 1530 aa19.44■□□□□ 0.7
CCDC33-201ENST00000268082 FANCD2Q9BXW9 1451 aa19.41■□□□□ 0.7
CCDC33-201ENST00000268082 CLIP1P30622 1438 aa19.41■□□□□ 0.7
CCDC33-201ENST00000268082 RAPGEF2Q9Y4G8 1499 aa19.4■□□□□ 0.7
CCDC33-201ENST00000268082 VPS8Q8N3P4 1428 aa19.38■□□□□ 0.69
CCDC33-201ENST00000268082 CUX1P39880 1505 aa19.37■□□□□ 0.69
CCDC33-201ENST00000268082 PRXQ9BXM0 1461 aa19.33■□□□□ 0.69
CCDC33-201ENST00000268082 CCER1Q8TC90 406 aaPredicted RBP19.33■□□□□ 0.69
CCDC33-201ENST00000268082 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.32■□□□□ 0.68
CCDC33-201ENST00000268082 CUX2O14529 1486 aa19.32■□□□□ 0.68
CCDC33-201ENST00000268082 MRC2Q9UBG0 1479 aa19.31■□□□□ 0.68
CCDC33-201ENST00000268082 URB2Q14146 1524 aaKnown RBP19.25■□□□□ 0.67
CCDC33-201ENST00000268082 WDR62O43379 1518 aa19.24■□□□□ 0.67
CCDC33-201ENST00000268082 KIF27Q86VH2 1401 aa19.23■□□□□ 0.67
CCDC33-201ENST00000268082 TTBK1Q5TCY1 1321 aaPredicted RBP19.2■□□□□ 0.66
CCDC33-201ENST00000268082 ARAP1Q96P48 1450 aa19.17■□□□□ 0.66
CCDC33-201ENST00000268082 TOPBP1Q92547 1522 aa19.11■□□□□ 0.65
CCDC33-201ENST00000268082 APLP2Q06481 763 aa19.11■□□□□ 0.65
CCDC33-201ENST00000268082 DNMBPQ6XZF7 1577 aa19.05■□□□□ 0.64
CCDC33-201ENST00000268082 FGD5Q6ZNL6 1462 aa19.02■□□□□ 0.64
CCDC33-201ENST00000268082 ARHGAP35Q9NRY4 1499 aa19.01■□□□□ 0.63
CCDC33-201ENST00000268082 ZNF608Q9ULD9 1512 aaPredicted RBP18.98■□□□□ 0.63
CCDC33-201ENST00000268082 RAD54L2Q9Y4B4 1467 aa18.96■□□□□ 0.63
CCDC33-201ENST00000268082 POLA1P09884 1462 aaPredicted RBP18.96■□□□□ 0.63
CCDC33-201ENST00000268082 IGF1RP08069 1367 aa18.96■□□□□ 0.63
CCDC33-201ENST00000268082 HNRNPUL2Q1KMD3 747 aaKnown RBP18.95■□□□□ 0.62
CCDC33-201ENST00000268082 MAP3K1Q13233 1512 aa18.95■□□□□ 0.62
CCDC33-201ENST00000268082 RRBP1Q9P2E9 1410 aaKnown RBP18.95■□□□□ 0.62
CCDC33-201ENST00000268082 RANGAP1P46060 587 aaPredicted RBP18.93■□□□□ 0.62
CCDC33-201ENST00000268082 DIEXFQ68CQ4 756 aaKnown RBP18.92■□□□□ 0.62
CCDC33-201ENST00000268082 IFT140Q96RY7 1462 aa18.9■□□□□ 0.62
CCDC33-201ENST00000268082 TARBP1Q13395 1621 aaKnown RBP18.9■□□□□ 0.62
CCDC33-201ENST00000268082 CUL7Q14999 1698 aa18.89■□□□□ 0.61
CCDC33-201ENST00000268082 TIAM1Q13009 1591 aa18.89■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms