Protein–RNA interactions for Protein: P26368

U2AF2, Splicing factor U2AF 65 kDa subunit, humanhuman

Known RBP eCLIP

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF2P26368 SMARCB1-205ENST00000417137 889 ntTSL 326.13■■□□□ 1.773e-8■□□□□ 9.3
U2AF2P26368 AL353743.1-201ENST00000637846 1769 ntTSL 5 BASIC25.6■■□□□ 1.691e-5■□□□□ 9.3
U2AF2P26368 RAP1B-213ENST00000501412 1488 ntTSL 225.59■■□□□ 1.693e-8■□□□□ 9.3
U2AF2P26368 ENTPD6-212ENST00000439162 1028 ntAPPRIS ALT2 TSL 325.42■■□□□ 1.661e-5■□□□□ 9.3
U2AF2P26368 RAP1B-217ENST00000538283 591 ntTSL 424.95■■□□□ 1.583e-8■□□□□ 9.3
U2AF2P26368 SVIL-AS1-205ENST00000430295 440 ntTSL 223.95■■□□□ 1.421e-5■□□□□ 9.3
U2AF2P26368 POLA2-206ENST00000532469 1499 ntTSL 223.94■■□□□ 1.421e-5■□□□□ 9.3
U2AF2P26368 C9orf3-208ENST00000451893 514 ntTSL 323.87■■□□□ 1.413e-8■□□□□ 9.3
U2AF2P26368 RAP1B-202ENST00000341355 714 ntAPPRIS P1 TSL 3 BASIC23.84■■□□□ 1.413e-8■□□□□ 9.3
U2AF2P26368 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC23.75■■□□□ 1.391e-5■□□□□ 9.3
U2AF2P26368 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC23.56■■□□□ 1.363e-8■□□□□ 9.3
U2AF2P26368 RAP1B-209ENST00000460800 755 ntTSL 323.52■■□□□ 1.363e-8■□□□□ 9.3
U2AF2P26368 RAP1B-214ENST00000534899 606 ntTSL 423.52■■□□□ 1.363e-8■□□□□ 9.3
U2AF2P26368 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.311e-5■□□□□ 9.3
U2AF2P26368 PANK1-201ENST00000307534 6976 ntTSL 1 (best) BASIC23.17■■□□□ 1.31e-5■□□□□ 9.3
U2AF2P26368 TNRC18-208ENST00000455076 577 ntTSL 222.87■■□□□ 1.251e-5■□□□□ 9.3
U2AF2P26368 B3GALNT2-206ENST00000494378 1869 ntTSL 222.66■■□□□ 1.221e-5■□□□□ 9.3
U2AF2P26368 RAP1B-212ENST00000489473 561 ntTSL 422.59■■□□□ 1.213e-8■□□□□ 9.3
U2AF2P26368 RAP1B-219ENST00000538980 587 ntTSL 322.59■■□□□ 1.213e-8■□□□□ 9.3
U2AF2P26368 RAP1B-223ENST00000541167 561 ntTSL 422.59■■□□□ 1.213e-8■□□□□ 9.3
U2AF2P26368 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC22.54■■□□□ 1.21e-5■□□□□ 9.3
U2AF2P26368 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC22.51■■□□□ 1.193e-7■□□□□ 9.3
U2AF2P26368 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC22.28■■□□□ 1.161e-5■□□□□ 9.3
U2AF2P26368 RAP1B-222ENST00000540781 571 ntTSL 422.24■■□□□ 1.153e-8■□□□□ 9.3
U2AF2P26368 FGFR4-213ENST00000511076 838 ntTSL 522.08■■□□□ 1.131e-5■□□□□ 9.3
U2AF2P26368 AGAP3-207ENST00000467724 826 ntTSL 521.73■■□□□ 1.071e-5■□□□□ 9.3
U2AF2P26368 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC21.63■■□□□ 1.053e-8■□□□□ 9.3
U2AF2P26368 RAP1B-205ENST00000422358 468 ntTSL 421.63■■□□□ 1.053e-8■□□□□ 9.3
U2AF2P26368 RAP1B-208ENST00000453560 530 ntTSL 421.63■■□□□ 1.053e-8■□□□□ 9.3
U2AF2P26368 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC21.44■■□□□ 1.023e-8■□□□□ 9.3
U2AF2P26368 ENTPD6-207ENST00000425813 945 ntTSL 521.32■■□□□ 11e-5■□□□□ 9.3
U2AF2P26368 ATP6V1H-205ENST00000519588 578 ntTSL 420.85■□□□□ 0.931e-5■□□□□ 9.3
U2AF2P26368 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.891e-5■□□□□ 9.3
U2AF2P26368 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.881e-5■□□□□ 9.3
U2AF2P26368 RAP1B-227ENST00000542018 633 ntTSL 420.45■□□□□ 0.863e-8■□□□□ 9.3
U2AF2P26368 POLA2-204ENST00000527850 2403 ntTSL 220.39■□□□□ 0.861e-5■□□□□ 9.3
U2AF2P26368 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC20.22■□□□□ 0.831e-5■□□□□ 9.3
U2AF2P26368 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC20.16■□□□□ 0.821e-5■□□□□ 9.3
U2AF2P26368 HMGN1-219ENST00000491183 527 ntTSL 220.02■□□□□ 0.81e-5■□□□□ 9.3
U2AF2P26368 AGAP3-225ENST00000498559 581 ntTSL 219.97■□□□□ 0.791e-5■□□□□ 9.3
U2AF2P26368 ENTPD6-211ENST00000435520 878 ntTSL 319.78■□□□□ 0.761e-5■□□□□ 9.3
U2AF2P26368 PHF20-207ENST00000461122 919 ntTSL 319.71■□□□□ 0.751e-5■□□□□ 9.3
U2AF2P26368 ENTPD6-206ENST00000418890 656 ntTSL 319.54■□□□□ 0.721e-5■□□□□ 9.3
U2AF2P26368 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC19.52■□□□□ 0.721e-5■□□□□ 9.3
U2AF2P26368 RAP1B-225ENST00000541386 480 ntTSL 419.43■□□□□ 0.73e-8■□□□□ 9.3
U2AF2P26368 RAP1B-232ENST00000545270 640 ntTSL 319.43■□□□□ 0.73e-8■□□□□ 9.3
U2AF2P26368 HMGN1-212ENST00000479586 841 ntTSL 218.88■□□□□ 0.611e-5■□□□□ 9.3
U2AF2P26368 UNK-208ENST00000592629 633 ntTSL 318.81■□□□□ 0.61e-5■□□□□ 9.3
U2AF2P26368 PPARA-204ENST00000415785 531 ntTSL 418.25■□□□□ 0.513e-7■□□□□ 9.3
U2AF2P26368 TVP23C-210ENST00000584811 2989 ntTSL 1 (best) BASIC18.23■□□□□ 0.511e-5■□□□□ 9.3
U2AF2P26368 MTX3-201ENST00000509852 1655 ntTSL 1 (best) BASIC18.17■□□□□ 0.51e-5■□□□□ 9.3
U2AF2P26368 ACTL6A-203ENST00000450518 1750 ntTSL 1 (best) BASIC18.1■□□□□ 0.493e-7■□□□□ 9.3
U2AF2P26368 TVP23C-203ENST00000428082 1911 ntAPPRIS ALT1 TSL 1 (best) BASIC17.96■□□□□ 0.471e-5■□□□□ 9.3
U2AF2P26368 COL2A1-202ENST00000380518 5071 ntAPPRIS ALT1 TSL 1 (best) BASIC17.95■□□□□ 0.461e-5■□□□□ 9.3
U2AF2P26368 ACTL6A-202ENST00000429709 1901 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.453e-7■□□□□ 9.3
U2AF2P26368 ENTPD6-208ENST00000427553 451 ntTSL 317.82■□□□□ 0.441e-5■□□□□ 9.3
U2AF2P26368 RREB1-205ENST00000467782 243 ntTSL 517.81■□□□□ 0.441e-5■□□□□ 9.3
U2AF2P26368 RAP1B-211ENST00000485252 312 ntTSL 517.75■□□□□ 0.433e-8■□□□□ 9.3
U2AF2P26368 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.41e-5■□□□□ 9.3
U2AF2P26368 TMEM30A-201ENST00000230461 4594 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.383e-7■□□□□ 9.3
U2AF2P26368 MTX3-202ENST00000512528 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.361e-5■□□□□ 9.3
U2AF2P26368 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.335e-21■□□□□ 9.3
U2AF2P26368 ACTL6A-207ENST00000468767 622 ntTSL 317.05■□□□□ 0.323e-7■□□□□ 9.3
U2AF2P26368 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC16.83■□□□□ 0.281e-5■□□□□ 9.3
U2AF2P26368 SVIL-AS1-204ENST00000427063 2025 ntTSL 1 (best) BASIC16.58■□□□□ 0.251e-5■□□□□ 9.3
U2AF2P26368 TAF1D-211ENST00000529508 538 ntTSL 216.48■□□□□ 0.231e-9■□□□□ 9.3
U2AF2P26368 DNMT3A-208ENST00000466601 812 ntTSL 216.42■□□□□ 0.221e-5■□□□□ 9.3
U2AF2P26368 ZDHHC6-202ENST00000369405 2170 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.21e-5■□□□□ 9.3
U2AF2P26368 DNMT3A-207ENST00000461228 581 ntTSL 515.89■□□□□ 0.131e-5■□□□□ 9.3
U2AF2P26368 CCDC50-201ENST00000392455 8429 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.131e-5■□□□□ 9.3
U2AF2P26368 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.131e-5■□□□□ 9.3
U2AF2P26368 PSMB5-206ENST00000555895 444 ntTSL 315.85■□□□□ 0.133e-7■□□□□ 9.3
U2AF2P26368 UNK-202ENST00000586527 1312 ntTSL 1 (best)15.85■□□□□ 0.131e-5■□□□□ 9.3
U2AF2P26368 COL2A1-205ENST00000474996 760 ntTSL 315.74■□□□□ 0.111e-5■□□□□ 9.3
U2AF2P26368 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC15.74■□□□□ 0.111e-5■□□□□ 9.3
U2AF2P26368 PPARA-205ENST00000420804 572 ntTSL 215.67■□□□□ 0.13e-7■□□□□ 9.3
U2AF2P26368 DNMT3A-211ENST00000474887 847 ntTSL 315.58■□□□□ 0.081e-5■□□□□ 9.3
U2AF2P26368 RC3H2-201ENST00000335387 3081 ntTSL 1 (best) BASIC15.57■□□□□ 0.081e-5■□□□□ 9.3
U2AF2P26368 CBR4-202ENST00000504480 1602 ntTSL 2 BASIC15.47■□□□□ 0.075e-11■□□□□ 9.3
U2AF2P26368 PANK1-205ENST00000488482 572 ntTSL 215.46■□□□□ 0.071e-5■□□□□ 9.3
U2AF2P26368 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC15.37■□□□□ 0.051e-5■□□□□ 9.3
U2AF2P26368 PPARA-202ENST00000402126 1558 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.053e-7■□□□□ 9.3
U2AF2P26368 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.051e-5■□□□□ 9.3
U2AF2P26368 TMEM30A-203ENST00000475111 2791 ntTSL 1 (best) BASIC15.3■□□□□ 0.043e-7■□□□□ 9.3
U2AF2P26368 AGAP3-205ENST00000463381 2730 ntTSL 2 BASIC15.29■□□□□ 0.041e-5■□□□□ 9.3
U2AF2P26368 DNMT3A-214ENST00000491288 472 ntTSL 315.26■□□□□ 0.031e-5■□□□□ 9.3
U2AF2P26368 ZNF33A-205ENST00000469037 1530 ntTSL 5 BASIC15.17■□□□□ 0.023e-7■□□□□ 9.3
U2AF2P26368 AGAP3-226ENST00000622464 3121 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 01e-5■□□□□ 9.3
U2AF2P26368 TMBIM4-214ENST00000633367 876 ntTSL 1 (best)14.94□□□□□ -0.021e-5■□□□□ 9.3
U2AF2P26368 SVIL-AS1-201ENST00000413405 767 ntTSL 1 (best)14.92□□□□□ -0.021e-5■□□□□ 9.3
U2AF2P26368 PHF20-211ENST00000481202 1635 ntTSL 1 (best)14.84□□□□□ -0.031e-5■□□□□ 9.3
U2AF2P26368 POLA2-201ENST00000265465 3744 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.041e-5■□□□□ 9.3
U2AF2P26368 SMARCB1-203ENST00000407082 1182 ntTSL 5 BASIC14.75□□□□□ -0.053e-8■□□□□ 9.3
U2AF2P26368 RREB1-206ENST00000471433 1021 ntTSL 514.74□□□□□ -0.051e-5■□□□□ 9.3
U2AF2P26368 RREB1-209ENST00000491191 998 ntTSL 514.74□□□□□ -0.051e-5■□□□□ 9.3
U2AF2P26368 ZNF90-202ENST00000469078 1918 ntTSL 514.7□□□□□ -0.061e-5■□□□□ 9.3
U2AF2P26368 PHF20-201ENST00000339089 1997 ntTSL 214.49□□□□□ -0.091e-5■□□□□ 9.3
U2AF2P26368 PHF20-206ENST00000452270 832 ntTSL 514.4□□□□□ -0.11e-5■□□□□ 9.3
U2AF2P26368 UNK-204ENST00000587501 984 ntTSL 1 (best)14.37□□□□□ -0.111e-5■□□□□ 9.3
U2AF2P26368 TMBIM4-208ENST00000542724 770 ntTSL 1 (best) BASIC14.3□□□□□ -0.121e-5■□□□□ 9.3
Retrieved 100 of 36,523 protein–RNA pairs in 390.5 ms