Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 DUSP16-201ENST00000228862 3402 ntTSL 5 BASIC10.77□□□□□ -0.69
RAB40CQ96S21 AL033529.1-201ENST00000480336 3447 ntAPPRIS P1 TSL 2 BASIC10.77□□□□□ -0.69
RAB40CQ96S21 MKL1-205ENST00000407029 4091 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
RAB40CQ96S21 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC10.77□□□□□ -0.69
RAB40CQ96S21 LILRB1-202ENST00000396315 2157 ntAPPRIS P4 TSL 1 (best) BASIC10.77□□□□□ -0.69
RAB40CQ96S21 IMPDH1P8-201ENST00000413639 1525 ntBASIC10.77□□□□□ -0.69
RAB40CQ96S21 CDK5RAP3-202ENST00000536708 1975 ntTSL 2 BASIC10.77□□□□□ -0.69
RAB40CQ96S21 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
RAB40CQ96S21 DNMBP-201ENST00000324109 6400 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
RAB40CQ96S21 DNAJC11-202ENST00000377577 3311 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
RAB40CQ96S21 TGM5-207ENST00000622115 2202 ntAPPRIS ALT2 TSL 5 BASIC10.77□□□□□ -0.69
RAB40CQ96S21 AC087164.2-201ENST00000624514 3130 ntBASIC10.77□□□□□ -0.69
RAB40CQ96S21 RP2-201ENST00000218340 3803 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
RAB40CQ96S21 C21orf62-AS1-201ENST00000382375 2453 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
RAB40CQ96S21 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
RAB40CQ96S21 DDX56-204ENST00000431640 1554 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
RAB40CQ96S21 USP14-208ENST00000582707 1803 ntTSL 5 BASIC10.77□□□□□ -0.69
RAB40CQ96S21 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
RAB40CQ96S21 ACADL-201ENST00000233710 2543 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
RAB40CQ96S21 HYOU1-217ENST00000612687 4360 ntTSL 5 BASIC10.77□□□□□ -0.69
RAB40CQ96S21 PCDHGB2-201ENST00000522605 4602 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
RAB40CQ96S21 STAMBP-204ENST00000409707 1649 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
RAB40CQ96S21 CELF3-202ENST00000290585 2335 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
RAB40CQ96S21 QRICH1-204ENST00000424300 3009 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
RAB40CQ96S21 RNF24-201ENST00000336095 7453 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
RAB40CQ96S21 PSG8-AS1-201ENST00000425668 1873 ntTSL 2 BASIC10.76□□□□□ -0.69
RAB40CQ96S21 UBOX5-202ENST00000348031 4469 ntAPPRIS ALT1 TSL 1 (best) BASIC10.76□□□□□ -0.69
RAB40CQ96S21 CTSL-201ENST00000340342 1436 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
RAB40CQ96S21 TPM4-202ENST00000344824 1417 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
RAB40CQ96S21 CEP250-201ENST00000397524 1419 ntTSL 5 BASIC10.76□□□□□ -0.69
RAB40CQ96S21 CYP4F12-201ENST00000324632 1687 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
RAB40CQ96S21 SUOX-203ENST00000394109 2860 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
RAB40CQ96S21 PRKCG-201ENST00000263431 3133 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
RAB40CQ96S21 ANKZF1-202ENST00000409849 2155 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
RAB40CQ96S21 TSNAXIP1-201ENST00000388833 2429 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
RAB40CQ96S21 ELMOD3-203ENST00000409013 2413 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
RAB40CQ96S21 CCDC144A-204ENST00000360524 5830 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
RAB40CQ96S21 CHL1-201ENST00000256509 8023 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
RAB40CQ96S21 ANKRD26-202ENST00000436985 6827 ntAPPRIS ALT2 TSL 1 (best) BASIC10.76□□□□□ -0.69
RAB40CQ96S21 TRIM25-202ENST00000537230 2906 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
RAB40CQ96S21 ERI2-208ENST00000564349 3657 ntTSL 2 BASIC10.76□□□□□ -0.69
RAB40CQ96S21 APEH-201ENST00000296456 3220 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
RAB40CQ96S21 UAP1L1-201ENST00000360271 3201 ntTSL 2 BASIC10.76□□□□□ -0.69
RAB40CQ96S21 FP325332.1-201ENST00000624818 2045 ntBASIC10.76□□□□□ -0.69
RAB40CQ96S21 UBE2A-210ENST00000630695 1771 ntTSL 4 BASIC10.76□□□□□ -0.69
RAB40CQ96S21 STAT1-201ENST00000361099 4310 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
RAB40CQ96S21 RPS3-201ENST00000278572 907 ntTSL 3 BASIC10.76□□□□□ -0.69
RAB40CQ96S21 BAK1P1-201ENST00000317045 636 ntBASIC10.76□□□□□ -0.69
RAB40CQ96S21 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
RAB40CQ96S21 SMS-201ENST00000379404 1174 ntTSL 3 BASIC10.76□□□□□ -0.69
RAB40CQ96S21 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC10.76□□□□□ -0.69
RAB40CQ96S21 AL160290.2-202ENST00000448671 574 ntTSL 3 BASIC10.76□□□□□ -0.69
RAB40CQ96S21 TMEM225B-203ENST00000453227 1041 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
RAB40CQ96S21 APOA2-204ENST00000464492 530 ntTSL 3 BASIC10.76□□□□□ -0.69
RAB40CQ96S21 CENPBD1P1-203ENST00000479047 569 ntTSL 3 BASIC10.76□□□□□ -0.69
RAB40CQ96S21 RCC2P8-201ENST00000502779 1035 ntBASIC10.76□□□□□ -0.69
RAB40CQ96S21 AC083973.1-206ENST00000518213 815 ntTSL 3 BASIC10.76□□□□□ -0.69
RAB40CQ96S21 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC10.76□□□□□ -0.69
RAB40CQ96S21 AC084859.1-201ENST00000533002 670 ntTSL 4 BASIC10.76□□□□□ -0.69
RAB40CQ96S21 LINC02376-201ENST00000536330 724 ntTSL 3 BASIC10.76□□□□□ -0.69
RAB40CQ96S21 AC012158.2-201ENST00000536546 354 ntBASIC10.76□□□□□ -0.69
RAB40CQ96S21 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC10.76□□□□□ -0.69
RAB40CQ96S21 DERL2-202ENST00000570848 657 ntTSL 5 BASIC10.76□□□□□ -0.69
RAB40CQ96S21 AC009134.1-201ENST00000571939 443 ntTSL 3 BASIC10.76□□□□□ -0.69
RAB40CQ96S21 MIR4265-201ENST00000582152 99 ntBASIC10.76□□□□□ -0.69
RAB40CQ96S21 AC079336.1-201ENST00000583156 420 ntTSL 3 BASIC10.76□□□□□ -0.69
RAB40CQ96S21 PRKN-211ENST00000615065 261 ntTSL 5 BASIC10.76□□□□□ -0.69
RAB40CQ96S21 HPX-213ENST00000615166 826 ntTSL 5 BASIC10.76□□□□□ -0.69
RAB40CQ96S21 MIR6752-201ENST00000618442 71 ntBASIC10.76□□□□□ -0.69
RAB40CQ96S21 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC10.76□□□□□ -0.69
RAB40CQ96S21 LINC00623-205ENST00000621058 767 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
RAB40CQ96S21 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC10.76□□□□□ -0.69
RAB40CQ96S21 CELF1-204ENST00000395290 7666 ntAPPRIS ALT1 TSL 2 BASIC10.76□□□□□ -0.69
RAB40CQ96S21 SMCR5-201ENST00000543475 2844 ntBASIC10.76□□□□□ -0.69
RAB40CQ96S21 GOLGA3-201ENST00000204726 9252 ntAPPRIS P3 TSL 5 BASIC10.76□□□□□ -0.69
RAB40CQ96S21 UMPS-201ENST00000232607 6738 ntAPPRIS P1 TSL 1 (best) BASIC10.76□□□□□ -0.69
RAB40CQ96S21 TMEM9-203ENST00000367333 1564 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
RAB40CQ96S21 HLA-E-201ENST00000376630 2601 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
RAB40CQ96S21 UBP1-204ENST00000447368 3669 ntAPPRIS ALT1 TSL 2 BASIC10.76□□□□□ -0.69
RAB40CQ96S21 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
RAB40CQ96S21 ZNF286A-203ENST00000421016 5541 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
RAB40CQ96S21 CALM1-201ENST00000356978 4242 ntAPPRIS P2 TSL 1 (best) BASIC10.76□□□□□ -0.69
RAB40CQ96S21 SULT1A2-202ENST00000395630 1322 ntAPPRIS P1 TSL 5 BASIC10.76□□□□□ -0.69
RAB40CQ96S21 LINC01227-205ENST00000567317 1338 ntTSL 2 BASIC10.76□□□□□ -0.69
RAB40CQ96S21 HECW2-202ENST00000409111 6692 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
RAB40CQ96S21 OR2B11-202ENST00000641149 6414 ntAPPRIS P1 BASIC10.76□□□□□ -0.69
RAB40CQ96S21 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC10.76□□□□□ -0.69
RAB40CQ96S21 AL391097.1-201ENST00000432706 1620 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
RAB40CQ96S21 PACRG-AS1-201ENST00000626335 2192 ntTSL 2 BASIC10.76□□□□□ -0.69
RAB40CQ96S21 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC10.76□□□□□ -0.69
RAB40CQ96S21 LINC00334-203ENST00000638500 1377 ntTSL 5 BASIC10.76□□□□□ -0.69
RAB40CQ96S21 CASZ1-201ENST00000344008 4405 ntTSL 2 BASIC10.76□□□□□ -0.69
RAB40CQ96S21 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
RAB40CQ96S21 SEPT10-202ENST00000397712 3071 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
RAB40CQ96S21 LIG1-201ENST00000263274 3384 ntAPPRIS P3 TSL 1 (best) BASIC10.76□□□□□ -0.69
RAB40CQ96S21 HSH2D-206ENST00000613986 1957 ntAPPRIS P1 TSL 2 BASIC10.76□□□□□ -0.69
RAB40CQ96S21 PMEPA1-205ENST00000395816 4519 ntTSL 1 (best) BASIC10.76□□□□□ -0.69
RAB40CQ96S21 SLC6A6-210ENST00000622186 6528 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
RAB40CQ96S21 RBMXL3-201ENST00000424776 3442 ntAPPRIS P1 BASIC10.75□□□□□ -0.69
RAB40CQ96S21 RHBDD1-201ENST00000341329 4883 ntAPPRIS P1 TSL 1 (best) BASIC10.75□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 79.8 ms