Protein–RNA interactions for Protein: Q8NCL8

TMEM116, Transmembrane protein 116, humanhuman

Predictions only

Length 245 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116Q8NCL8 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM116Q8NCL8 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM116Q8NCL8 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC17.4■□□□□ 0.38
TMEM116Q8NCL8 STMN4-201ENST00000265770 1250 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM116Q8NCL8 LRP11-202ENST00000367368 1042 ntTSL 2 BASIC17.4■□□□□ 0.38
TMEM116Q8NCL8 RAET1E-AS1-203ENST00000606915 1210 ntTSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM116Q8NCL8 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
TMEM116Q8NCL8 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC17.4■□□□□ 0.38
TMEM116Q8NCL8 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM116Q8NCL8 CACNB1-203ENST00000394310 1753 ntAPPRIS ALT1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM116Q8NCL8 CLDND1-202ENST00000394180 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM116Q8NCL8 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC17.4■□□□□ 0.38
TMEM116Q8NCL8 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC17.4■□□□□ 0.38
TMEM116Q8NCL8 REPIN1-214ENST00000489432 2058 ntAPPRIS ALT2 TSL 2 BASIC17.4■□□□□ 0.38
TMEM116Q8NCL8 SLC19A1-209ENST00000485649 1896 ntAPPRIS ALT2 TSL 2 BASIC17.39■□□□□ 0.38
TMEM116Q8NCL8 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM116Q8NCL8 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM116Q8NCL8 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM116Q8NCL8 PICK1-202ENST00000404072 2164 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TMEM116Q8NCL8 RPP38-207ENST00000616640 1537 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TMEM116Q8NCL8 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC17.39■□□□□ 0.37
TMEM116Q8NCL8 CTAG1B-201ENST00000328435 748 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM116Q8NCL8 EBPL-205ENST00000378284 967 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM116Q8NCL8 FAM72B-203ENST00000452190 748 ntTSL 3 BASIC17.39■□□□□ 0.37
TMEM116Q8NCL8 AC026785.2-201ENST00000511821 867 ntTSL 2 BASIC17.39■□□□□ 0.37
TMEM116Q8NCL8 Z92544.1-202ENST00000571933 1220 ntBASIC17.39■□□□□ 0.37
TMEM116Q8NCL8 CTAG1A-202ENST00000599837 748 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM116Q8NCL8 AC243829.1-202ENST00000618848 486 ntTSL 3 BASIC17.39■□□□□ 0.37
TMEM116Q8NCL8 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM116Q8NCL8 SLC25A47-202ENST00000557052 1552 ntTSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM116Q8NCL8 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM116Q8NCL8 AC005703.6-201ENST00000623265 1329 ntBASIC17.39■□□□□ 0.37
TMEM116Q8NCL8 PPP5C-201ENST00000012443 2109 ntAPPRIS P1 TSL 1 (best) BASIC17.39■□□□□ 0.37
TMEM116Q8NCL8 AC021242.3-201ENST00000607598 1377 ntBASIC17.39■□□□□ 0.37
TMEM116Q8NCL8 FP325331.1-202ENST00000623531 1380 ntBASIC17.39■□□□□ 0.37
TMEM116Q8NCL8 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC17.39■□□□□ 0.37
TMEM116Q8NCL8 P4HA3-202ENST00000427714 2248 ntTSL 2 BASIC17.39■□□□□ 0.37
TMEM116Q8NCL8 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC17.39■□□□□ 0.37
TMEM116Q8NCL8 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM116Q8NCL8 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM116Q8NCL8 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM116Q8NCL8 FAM72A-202ENST00000367128 2398 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM116Q8NCL8 FAM72D-201ENST00000400889 2397 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM116Q8NCL8 NKX6-2-201ENST00000368592 2673 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM116Q8NCL8 AC004980.1-201ENST00000418663 2667 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM116Q8NCL8 TMEM44-211ENST00000473092 1508 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM116Q8NCL8 CACNB1-201ENST00000344140 1889 ntTSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM116Q8NCL8 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM116Q8NCL8 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM116Q8NCL8 ZFAND5-202ENST00000343431 1073 ntAPPRIS P1 TSL 5 BASIC17.38■□□□□ 0.37
TMEM116Q8NCL8 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM116Q8NCL8 ZBTB7A-201ENST00000322357 5422 ntAPPRIS P1 TSL 1 (best) BASIC17.38■□□□□ 0.37
TMEM116Q8NCL8 SOHLH1-202ENST00000425225 1411 ntAPPRIS ALT2 TSL 5 BASIC17.38■□□□□ 0.37
TMEM116Q8NCL8 SNX27-204ENST00000458013 6403 ntAPPRIS ALT1 TSL 5 BASIC17.38■□□□□ 0.37
TMEM116Q8NCL8 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM116Q8NCL8 FRAT1-201ENST00000371021 2649 ntAPPRIS P1 BASIC17.37■□□□□ 0.37
TMEM116Q8NCL8 CDIPT-201ENST00000219789 2353 ntAPPRIS P1 TSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM116Q8NCL8 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM116Q8NCL8 HMX3-201ENST00000357878 1173 ntAPPRIS P1 TSL 2 BASIC17.37■□□□□ 0.37
TMEM116Q8NCL8 SMUG1-203ENST00000401977 1082 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TMEM116Q8NCL8 AC009299.2-201ENST00000482477 511 ntBASIC17.37■□□□□ 0.37
TMEM116Q8NCL8 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC17.37■□□□□ 0.37
TMEM116Q8NCL8 AL451085.2-201ENST00000605085 799 ntBASIC17.37■□□□□ 0.37
TMEM116Q8NCL8 LINC01529-204ENST00000636474 1715 ntBASIC17.37■□□□□ 0.37
TMEM116Q8NCL8 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC17.37■□□□□ 0.37
TMEM116Q8NCL8 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC17.37■□□□□ 0.37
TMEM116Q8NCL8 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC17.37■□□□□ 0.37
TMEM116Q8NCL8 ZNF688-203ENST00000563276 1492 ntTSL 2 BASIC17.37■□□□□ 0.37
TMEM116Q8NCL8 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TMEM116Q8NCL8 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC17.37■□□□□ 0.37
TMEM116Q8NCL8 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC17.37■□□□□ 0.37
TMEM116Q8NCL8 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM116Q8NCL8 LACTBL1-201ENST00000426928 1641 ntAPPRIS P5 TSL 5 BASIC17.36■□□□□ 0.37
TMEM116Q8NCL8 ITPKC-201ENST00000263370 3385 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM116Q8NCL8 CIDEB-201ENST00000258807 2294 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM116Q8NCL8 SPATA2L-201ENST00000289805 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM116Q8NCL8 MDK-203ENST00000395566 828 ntAPPRIS P2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM116Q8NCL8 C14orf80-201ENST00000329886 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM116Q8NCL8 MTCH2-201ENST00000302503 2587 ntAPPRIS P1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM116Q8NCL8 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC17.36■□□□□ 0.37
TMEM116Q8NCL8 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM116Q8NCL8 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM116Q8NCL8 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC17.35■□□□□ 0.37
TMEM116Q8NCL8 NKX3-2-201ENST00000382438 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM116Q8NCL8 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM116Q8NCL8 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC17.35■□□□□ 0.37
TMEM116Q8NCL8 AC137767.1-201ENST00000602918 1920 ntBASIC17.35■□□□□ 0.37
TMEM116Q8NCL8 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM116Q8NCL8 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC17.35■□□□□ 0.37
TMEM116Q8NCL8 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM116Q8NCL8 BARHL1-201ENST00000263610 2341 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM116Q8NCL8 P4HA2-202ENST00000360568 2313 ntAPPRIS ALT1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM116Q8NCL8 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM116Q8NCL8 RAB33A-201ENST00000257017 1258 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM116Q8NCL8 AC239859.2-201ENST00000444165 318 ntBASIC17.35■□□□□ 0.37
TMEM116Q8NCL8 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM116Q8NCL8 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC17.35■□□□□ 0.37
TMEM116Q8NCL8 SLC25A5-AS1-202ENST00000445759 1616 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM116Q8NCL8 USP25-202ENST00000285681 5216 ntTSL 1 (best) BASIC17.35■□□□□ 0.37
TMEM116Q8NCL8 GADD45GIP1-201ENST00000316939 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.35■□□□□ 0.37
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms