Protein–RNA interactions for Protein: P56746

CLDN15, Claudin-15, humanhuman

Predictions only

Length 228 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN15P56746 IKZF1-207ENST00000413698 1808 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
CLDN15P56746 SLC22A17-201ENST00000206544 2284 ntAPPRIS P4 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLDN15P56746 STK19-202ENST00000375333 1557 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLDN15P56746 SRPK3-203ENST00000370104 1753 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
CLDN15P56746 ZNHIT2-201ENST00000310597 1306 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
CLDN15P56746 GUK1-205ENST00000366722 850 ntTSL 3 BASIC19.83■□□□□ 0.77
CLDN15P56746 HSPE1-203ENST00000409729 478 ntTSL 2 BASIC19.83■□□□□ 0.77
CLDN15P56746 AL161908.1-203ENST00000425370 506 ntTSL 2 BASIC19.83■□□□□ 0.77
CLDN15P56746 GJD3-201ENST00000578689 885 ntAPPRIS P1 BASIC19.83■□□□□ 0.77
CLDN15P56746 ZFAND4-205ENST00000374371 2283 ntTSL 5 BASIC19.83■□□□□ 0.76
CLDN15P56746 CFP-202ENST00000377005 1435 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLDN15P56746 NFKBID-201ENST00000396901 1834 ntAPPRIS P2 TSL 1 (best) BASIC19.83■□□□□ 0.76
CLDN15P56746 NFKBID-211ENST00000641389 1834 ntAPPRIS ALT2 BASIC19.83■□□□□ 0.76
CLDN15P56746 DUSP8P3-201ENST00000399571 1760 ntBASIC19.83■□□□□ 0.76
CLDN15P56746 USP36-218ENST00000590546 1771 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
CLDN15P56746 AC096677.1-201ENST00000454651 1516 ntTSL 2 BASIC19.82■□□□□ 0.76
CLDN15P56746 GET4-201ENST00000265857 2090 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN15P56746 ERI3-201ENST00000372257 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN15P56746 RARA-203ENST00000394086 2008 ntTSL 2 BASIC19.82■□□□□ 0.76
CLDN15P56746 SPINT2-201ENST00000301244 1802 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN15P56746 GLT8D2-205ENST00000548660 1835 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CLDN15P56746 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN15P56746 AC126544.1-201ENST00000580842 1059 ntBASIC19.82■□□□□ 0.76
CLDN15P56746 MRPS2-202ENST00000371785 1640 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
CLDN15P56746 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN15P56746 ST3GAL4-202ENST00000356132 1745 ntTSL 5 BASIC19.82■□□□□ 0.76
CLDN15P56746 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN15P56746 C1orf122-202ENST00000373043 2229 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CLDN15P56746 BRD3-202ENST00000371834 2529 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN15P56746 TMEM150C-201ENST00000449862 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN15P56746 MAP6D1-201ENST00000318631 2111 ntAPPRIS P2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN15P56746 NKIRAS2-206ENST00000393885 1909 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN15P56746 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC19.81■□□□□ 0.76
CLDN15P56746 CROT-202ENST00000412227 1213 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN15P56746 GSX2-205ENST00000611459 1262 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN15P56746 EID2B-201ENST00000326282 1865 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CLDN15P56746 PRSS29P-202ENST00000568091 1864 ntTSL 5 BASIC19.81■□□□□ 0.76
CLDN15P56746 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.81■□□□□ 0.76
CLDN15P56746 LRRC75A-203ENST00000470794 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN15P56746 FAM136A-201ENST00000037869 1810 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN15P56746 SMAD1-201ENST00000302085 1966 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CLDN15P56746 AURKAIP1-204ENST00000378853 875 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CLDN15P56746 RBM38-205ENST00000440234 686 ntTSL 2 BASIC19.8■□□□□ 0.76
CLDN15P56746 GFRA3-202ENST00000378362 1837 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN15P56746 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN15P56746 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN15P56746 FAM167A-204ENST00000528897 1620 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CLDN15P56746 FAM110A-206ENST00000541082 1614 ntAPPRIS P1 TSL 3 BASIC19.8■□□□□ 0.76
CLDN15P56746 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC19.8■□□□□ 0.76
CLDN15P56746 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC19.79■□□□□ 0.76
CLDN15P56746 RHBDL3-204ENST00000538145 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN15P56746 FAM102B-202ENST00000405454 1585 ntAPPRIS ALT2 TSL 5 BASIC19.79■□□□□ 0.76
CLDN15P56746 PRR35-201ENST00000409413 2216 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN15P56746 CTBP1-203ENST00000382952 2467 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN15P56746 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN15P56746 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC19.79■□□□□ 0.76
CLDN15P56746 GRAMD4P2-201ENST00000423297 1097 ntBASIC19.79■□□□□ 0.76
CLDN15P56746 LINC00472-204ENST00000436803 667 ntTSL 5 BASIC19.79■□□□□ 0.76
CLDN15P56746 HOMER3-206ENST00000594439 982 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN15P56746 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC19.79■□□□□ 0.76
CLDN15P56746 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN15P56746 TTLL11-202ENST00000373776 2012 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN15P56746 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC19.79■□□□□ 0.76
CLDN15P56746 HSF1-201ENST00000400780 2105 ntTSL 5 BASIC19.79■□□□□ 0.76
CLDN15P56746 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CLDN15P56746 LEF1-AS1-207ENST00000512637 1675 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN15P56746 PIKFYVE-203ENST00000392202 2039 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN15P56746 SLC19A1-212ENST00000567670 2029 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN15P56746 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC19.78■□□□□ 0.76
CLDN15P56746 ABHD6-205ENST00000478253 2482 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
CLDN15P56746 UBE3C-209ENST00000611269 1866 ntTSL 2 BASIC19.78■□□□□ 0.76
CLDN15P56746 RBM42-203ENST00000588161 1609 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN15P56746 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN15P56746 P2RX2-204ENST00000351222 1140 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN15P56746 MIR935-201ENST00000401179 91 ntBASIC19.78■□□□□ 0.76
CLDN15P56746 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC19.78■□□□□ 0.76
CLDN15P56746 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN15P56746 RAB6A-204ENST00000536566 1267 ntTSL 5 BASIC19.78■□□□□ 0.76
CLDN15P56746 ATAD3B-201ENST00000308647 2448 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN15P56746 CCDC96-201ENST00000310085 2091 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
CLDN15P56746 ACSF2-203ENST00000502667 2098 ntTSL 2 BASIC19.78■□□□□ 0.76
CLDN15P56746 HTATIP2-201ENST00000419348 1477 ntTSL 2 BASIC19.78■□□□□ 0.76
CLDN15P56746 VPS53-211ENST00000571805 2356 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
CLDN15P56746 FJX1-201ENST00000317811 2450 ntAPPRIS P1 BASIC19.78■□□□□ 0.76
CLDN15P56746 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC19.78■□□□□ 0.76
CLDN15P56746 KCNN1-204ENST00000615435 1691 ntAPPRIS ALT1 TSL 5 BASIC19.78■□□□□ 0.76
CLDN15P56746 CPLX1-201ENST00000304062 2181 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN15P56746 CCDC151-203ENST00000591179 1943 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN15P56746 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC19.77■□□□□ 0.76
CLDN15P56746 RHOF-204ENST00000537265 699 ntTSL 2 BASIC19.77■□□□□ 0.76
CLDN15P56746 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC19.77■□□□□ 0.76
CLDN15P56746 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN15P56746 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC19.77■□□□□ 0.76
CLDN15P56746 TRAF4-205ENST00000444415 1456 ntTSL 5 BASIC19.77■□□□□ 0.76
CLDN15P56746 SIAH2-201ENST00000312960 2517 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
CLDN15P56746 IMPA2-201ENST00000269159 1534 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN15P56746 RBPMS2-201ENST00000300069 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CLDN15P56746 AMZ2-202ENST00000359904 2402 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CLDN15P56746 NFE2L3P1-201ENST00000588207 1959 ntBASIC19.76■□□□□ 0.75
CLDN15P56746 POMZP3-202ENST00000310842 1490 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms