Protein–RNA interactions for Protein: P48067

SLC6A9, Sodium- and chloride-dependent glycine transporter 1, humanhuman

Predictions only

Length 706 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A9P48067 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC6A9P48067 MGAT5B-209ENST00000569840 4492 ntAPPRIS ALT1 TSL 5 BASIC19.41■□□□□ 0.7
SLC6A9P48067 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SLC6A9P48067 PLPP2-202ENST00000327790 1397 ntTSL 5 BASIC19.41■□□□□ 0.7
SLC6A9P48067 MIR222HG-201ENST00000602461 1379 ntTSL 5 BASIC19.41■□□□□ 0.7
SLC6A9P48067 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
SLC6A9P48067 AMZ2-219ENST00000612294 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC6A9P48067 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
SLC6A9P48067 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
SLC6A9P48067 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC6A9P48067 BLOC1S4-201ENST00000320776 1617 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
SLC6A9P48067 CLDN5-203ENST00000413119 1760 ntTSL 2 BASIC19.4■□□□□ 0.7
SLC6A9P48067 ZDHHC20-203ENST00000400590 1869 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
SLC6A9P48067 LSM4-201ENST00000252816 986 ntTSL 2 BASIC19.4■□□□□ 0.7
SLC6A9P48067 YIF1A-201ENST00000359461 943 ntTSL 2 BASIC19.4■□□□□ 0.7
SLC6A9P48067 YIF1A-203ENST00000376901 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC6A9P48067 KRT16P3-201ENST00000439127 1283 ntBASIC19.4■□□□□ 0.7
SLC6A9P48067 AC073111.5-204ENST00000498682 1167 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
SLC6A9P48067 GRAMD4P7-201ENST00000578182 1232 ntBASIC19.4■□□□□ 0.7
SLC6A9P48067 YY1AP1-212ENST00000404643 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC6A9P48067 ARL6IP4-201ENST00000315580 1644 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC6A9P48067 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
SLC6A9P48067 ACSF2-207ENST00000504392 1881 ntTSL 2 BASIC19.39■□□□□ 0.7
SLC6A9P48067 DOK1-203ENST00000409429 1955 ntTSL 1 (best) BASIC19.39■□□□□ 0.7
SLC6A9P48067 NTNG2-202ENST00000393229 4792 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC6A9P48067 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC6A9P48067 NRXN2-201ENST00000265459 6621 ntAPPRIS P3 TSL 5 BASIC19.39■□□□□ 0.69
SLC6A9P48067 ASCC1-204ENST00000394915 1510 ntTSL 5 BASIC19.39■□□□□ 0.69
SLC6A9P48067 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC6A9P48067 LSR-202ENST00000354900 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC6A9P48067 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
SLC6A9P48067 NEK6-214ENST00000545174 2573 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
SLC6A9P48067 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SLC6A9P48067 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC6A9P48067 CORO1A-201ENST00000219150 1803 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC6A9P48067 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
SLC6A9P48067 VGLL2-201ENST00000326274 2212 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC6A9P48067 ARHGEF9-204ENST00000374878 2217 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
SLC6A9P48067 CHKB-AS1-201ENST00000380711 578 ntTSL 2 BASIC19.38■□□□□ 0.69
SLC6A9P48067 TRAPPC5-202ENST00000426877 765 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
SLC6A9P48067 HNRNPAB-208ENST00000515193 1595 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
SLC6A9P48067 AP001267.3-203ENST00000554407 579 ntTSL 2 BASIC19.38■□□□□ 0.69
SLC6A9P48067 TRAF7-203ENST00000565383 799 ntTSL 5 BASIC19.38■□□□□ 0.69
SLC6A9P48067 AC009102.2-201ENST00000606772 1639 ntBASIC19.38■□□□□ 0.69
SLC6A9P48067 MIR6724-1-201ENST00000616420 92 ntBASIC19.38■□□□□ 0.69
SLC6A9P48067 MIR6724-2-201ENST00000616483 92 ntBASIC19.38■□□□□ 0.69
SLC6A9P48067 MIR6724-4-201ENST00000617390 92 ntBASIC19.38■□□□□ 0.69
SLC6A9P48067 MIR6724-3-201ENST00000622482 92 ntBASIC19.38■□□□□ 0.69
SLC6A9P48067 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
SLC6A9P48067 HACD1-202ENST00000361271 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC6A9P48067 DES-201ENST00000373960 2248 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC6A9P48067 CMPK2-202ENST00000404168 2042 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC6A9P48067 FNTA-208ENST00000529687 1950 ntTSL 2 BASIC19.37■□□□□ 0.69
SLC6A9P48067 AL117328.2-201ENST00000624617 1940 ntBASIC19.37■□□□□ 0.69
SLC6A9P48067 NIPSNAP2-205ENST00000446778 1882 ntTSL 2 BASIC19.37■□□□□ 0.69
SLC6A9P48067 MAPK12-211ENST00000622558 1779 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
SLC6A9P48067 GCA-201ENST00000233612 1694 ntTSL 2 BASIC19.37■□□□□ 0.69
SLC6A9P48067 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC6A9P48067 FP325331.1-202ENST00000623531 1380 ntBASIC19.37■□□□□ 0.69
SLC6A9P48067 SDHAP1-204ENST00000427415 559 ntTSL 4 BASIC19.37■□□□□ 0.69
SLC6A9P48067 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC19.37■□□□□ 0.69
SLC6A9P48067 NKILA-201ENST00000613231 537 ntTSL 4 BASIC19.37■□□□□ 0.69
SLC6A9P48067 EN1-201ENST00000295206 2457 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
SLC6A9P48067 ZNF354A-201ENST00000335815 2484 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
SLC6A9P48067 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.37■□□□□ 0.69
SLC6A9P48067 SYT6-209ENST00000610222 1707 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
SLC6A9P48067 PPAN-201ENST00000253107 1657 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC6A9P48067 NANOS2-201ENST00000341294 1657 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
SLC6A9P48067 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC19.36■□□□□ 0.69
SLC6A9P48067 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC19.36■□□□□ 0.69
SLC6A9P48067 CNN3-201ENST00000370206 2165 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC6A9P48067 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC6A9P48067 DLL3-202ENST00000356433 2055 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
SLC6A9P48067 AK3-203ENST00000447596 705 ntTSL 2 BASIC19.36■□□□□ 0.69
SLC6A9P48067 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC19.36■□□□□ 0.69
SLC6A9P48067 TMEM218-215ENST00000532407 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC6A9P48067 TCEA1-214ENST00000640382 1234 ntTSL 5 BASIC19.36■□□□□ 0.69
SLC6A9P48067 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC19.36■□□□□ 0.69
SLC6A9P48067 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC6A9P48067 NIPSNAP1-201ENST00000216121 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC6A9P48067 PPP2R3B-202ENST00000390665 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
SLC6A9P48067 ULK2-202ENST00000395544 6010 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC6A9P48067 TSSK1B-201ENST00000390666 2478 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
SLC6A9P48067 PACRGL-201ENST00000295290 1937 ntTSL 5 BASIC19.35■□□□□ 0.69
SLC6A9P48067 CADM1-201ENST00000331581 1766 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SLC6A9P48067 ASB1-202ENST00000409297 878 ntTSL 5 BASIC19.35■□□□□ 0.69
SLC6A9P48067 AC092343.1-201ENST00000500224 729 ntTSL 3 BASIC19.35■□□□□ 0.69
SLC6A9P48067 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC19.35■□□□□ 0.69
SLC6A9P48067 CBWD2-203ENST00000416503 1665 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC6A9P48067 PCSK6-215ENST00000611967 3336 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SLC6A9P48067 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
SLC6A9P48067 ASB6-201ENST00000277458 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
SLC6A9P48067 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC6A9P48067 SHMT1-201ENST00000316694 2464 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC6A9P48067 TPST2-203ENST00000403880 2084 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
SLC6A9P48067 DENND1A-201ENST00000373618 3003 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SLC6A9P48067 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC6A9P48067 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
SLC6A9P48067 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
SLC6A9P48067 CRYAA-201ENST00000291554 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms