Protein–RNA interactions for Protein: P33240

CSTF2, Cleavage stimulation factor subunit 2, humanhuman

Known RBP eCLIP

Length 577 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2P33240 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.82□□□□□ -1.85e-7■■■■□ 19.7
CSTF2P33240 GALM-204ENST00000434934 724 ntTSL 33.79□□□□□ -1.85e-7■■■■□ 19.7
CSTF2P33240 C9orf3-212ENST00000468164 849 ntTSL 513.29□□□□□ -0.288e-7■■■■□ 19.7
CSTF2P33240 RPL31-203ENST00000409028 1110 ntTSL 2 BASIC7.56□□□□□ -1.29e-8■■■■□ 19.7
CSTF2P33240 RPL31-210ENST00000441435 717 ntTSL 25.7□□□□□ -1.59e-8■■■■□ 19.7
CSTF2P33240 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC4.73□□□□□ -1.659e-8■■■■□ 19.7
CSTF2P33240 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.29□□□□□ -1.729e-8■■■■□ 19.7
CSTF2P33240 RPTOR-206ENST00000573746 688 ntTSL 29.37□□□□□ -0.917e-11■■■■□ 19.7
CSTF2P33240 SRP54-AS1-202ENST00000555015 561 ntTSL 312.49□□□□□ -0.411e-10■■■■□ 19.7
CSTF2P33240 SRP54-AS1-203ENST00000556355 603 ntTSL 5 BASIC4.05□□□□□ -1.761e-10■■■■□ 19.7
CSTF2P33240 NCOR2-223ENST00000542565 746 ntTSL 319.97■□□□□ 0.793e-6■■■■□ 19.6
CSTF2P33240 NCOR2-203ENST00000404621 8520 ntAPPRIS ALT2 TSL 1 (best) BASIC14.48□□□□□ -0.093e-6■■■■□ 19.6
CSTF2P33240 NCOR2-215ENST00000458234 4675 ntAPPRIS ALT2 TSL 1 (best)13.48□□□□□ -0.253e-6■■■■□ 19.6
CSTF2P33240 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.313e-6■■■■□ 19.6
CSTF2P33240 TLN2-210ENST00000561322 249 ntTSL 524.14■■□□□ 1.452e-12■■■■□ 19.6
CSTF2P33240 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.021e-7■■■■□ 19.6
CSTF2P33240 FOXO1-203ENST00000636651 1773 ntTSL 510.34□□□□□ -0.751e-7■■■■□ 19.6
CSTF2P33240 FOCAD-211ENST00000604036 522 ntTSL 423.22■■□□□ 1.318e-7■■■■□ 19.6
CSTF2P33240 FOCAD-202ENST00000380249 6096 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.458e-7■■■■□ 19.6
CSTF2P33240 PTPRK-217ENST00000524534 2441 ntTSL 511.01□□□□□ -0.655e-7■■■■□ 19.6
CSTF2P33240 FLOT1-207ENST00000454845 629 ntTSL 314.77□□□□□ -0.051e-7■■■■□ 19.5
CSTF2P33240 ZNF644-211ENST00000498303 514 ntTSL 1 (best)13.99□□□□□ -0.177e-7■■■■□ 19.5
CSTF2P33240 LARGE1-210ENST00000434071 562 ntTSL 417.46■□□□□ 0.394e-6■■■■□ 19.5
CSTF2P33240 LARGE1-213ENST00000494763 537 ntTSL 416.66■□□□□ 0.264e-6■■■■□ 19.5
CSTF2P33240 LARGE1-208ENST00000430220 559 ntTSL 415.99■□□□□ 0.154e-6■■■■□ 19.5
CSTF2P33240 LARGE1-204ENST00000413114 773 ntTSL 415.31■□□□□ 0.044e-6■■■■□ 19.5
CSTF2P33240 LARGE1-201ENST00000354992 4409 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.114e-6■■■■□ 19.5
CSTF2P33240 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC12.87□□□□□ -0.354e-6■■■■□ 19.5
CSTF2P33240 LARGE1-202ENST00000397394 4138 ntAPPRIS P1 TSL 5 BASIC11.99□□□□□ -0.494e-6■■■■□ 19.5
CSTF2P33240 LARGE1-207ENST00000423375 568 ntTSL 49.64□□□□□ -0.874e-6■■■■□ 19.5
CSTF2P33240 LARGE1-209ENST00000432776 560 ntTSL 49.22□□□□□ -0.934e-6■■■■□ 19.5
CSTF2P33240 RPSA-201ENST00000301821 1171 ntAPPRIS P3 TSL 1 (best) BASIC10.24□□□□□ -0.779e-7■■■■□ 19.5
CSTF2P33240 RAE1-207ENST00000462438 3251 ntTSL 211.38□□□□□ -0.592e-6■■■■□ 19.5
CSTF2P33240 RAE1-203ENST00000395841 2639 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.712e-6■■■■□ 19.5
CSTF2P33240 RAE1-201ENST00000371242 2362 ntAPPRIS P1 TSL 5 BASIC10.41□□□□□ -0.742e-6■■■■□ 19.5
CSTF2P33240 RAE1-202ENST00000395840 2602 ntAPPRIS P1 TSL 1 (best) BASIC8.84□□□□□ -12e-6■■■■□ 19.5
CSTF2P33240 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC19.68■□□□□ 0.741e-6■■■■□ 19.5
CSTF2P33240 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.271e-6■■■■□ 19.5
CSTF2P33240 PARD6G-AS1-203ENST00000587254 584 ntTSL 414.53□□□□□ -0.081e-6■■■■□ 19.5
CSTF2P33240 PARD6G-AS1-201ENST00000585422 525 ntTSL 414.53□□□□□ -0.081e-6■■■■□ 19.5
CSTF2P33240 PARD6G-AS1-205ENST00000589574 647 ntTSL 3 BASIC13.8□□□□□ -0.21e-6■■■■□ 19.5
CSTF2P33240 AC139100.2-201ENST00000616901 662 ntBASIC12.64□□□□□ -0.391e-6■■■■□ 19.5
CSTF2P33240 PARD6G-AS1-202ENST00000586421 3333 ntTSL 2 BASIC10.25□□□□□ -0.771e-6■■■■□ 19.5
CSTF2P33240 LPP-216ENST00000484468 578 ntTSL 37.46□□□□□ -1.221e-6■■■■□ 19.5
CSTF2P33240 CPED1-206ENST00000450913 2501 ntTSL 1 (best) BASIC6.58□□□□□ -1.361e-6■■■■□ 19.5
CSTF2P33240 CPED1-201ENST00000310396 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.41e-6■■■■□ 19.5
CSTF2P33240 LPP-219ENST00000494233 412 ntTSL 55.95□□□□□ -1.461e-6■■■■□ 19.5
CSTF2P33240 CPED1-207ENST00000466055 543 ntTSL 35.66□□□□□ -1.51e-6■■■■□ 19.5
CSTF2P33240 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.48□□□□□ -1.531e-6■■■■□ 19.5
CSTF2P33240 SLC2A9-204ENST00000503280 584 ntTSL 47.46□□□□□ -1.222e-6■■■■□ 19.5
CSTF2P33240 SLC2A9-212ENST00000512342 967 ntTSL 37.3□□□□□ -1.242e-6■■■■□ 19.5
CSTF2P33240 MAP4K4-209ENST00000421882 3416 ntTSL 57.98□□□□□ -1.135e-7■■■■□ 19.5
CSTF2P33240 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.182e-6■■■■□ 19.5
CSTF2P33240 CASK-201ENST00000378154 2494 ntTSL 5 BASIC21.51■■□□□ 1.038e-7■■■■□ 19.5
CSTF2P33240 PRKCZ-201ENST00000378567 2326 ntAPPRIS P1 TSL 1 (best)20.94■□□□□ 0.948e-7■■■■□ 19.5
CSTF2P33240 PRKCZ-215ENST00000479263 1747 ntTSL 220.16■□□□□ 0.828e-7■■■■□ 19.5
CSTF2P33240 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC16.05■□□□□ 0.168e-7■■■■□ 19.5
CSTF2P33240 PRKCZ-204ENST00000461106 1916 ntTSL 215.92■□□□□ 0.148e-7■■■■□ 19.5
CSTF2P33240 CASK-202ENST00000378158 3848 ntTSL 5 BASIC15.27■□□□□ 0.048e-7■■■■□ 19.5
CSTF2P33240 PRKCZ-202ENST00000400921 2294 ntTSL 1 (best) BASIC14.82□□□□□ -0.048e-7■■■■□ 19.5
CSTF2P33240 PRKCZ-214ENST00000478770 1542 ntTSL 214.17□□□□□ -0.148e-7■■■■□ 19.5
CSTF2P33240 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.188e-7■■■■□ 19.5
CSTF2P33240 AC104123.1-201ENST00000502645 473 ntTSL 5 BASIC11.19□□□□□ -0.628e-7■■■■□ 19.5
CSTF2P33240 MBNL1-208ENST00000460166 552 ntTSL 48.81□□□□□ -18e-7■■■■□ 19.5
CSTF2P33240 CASK-208ENST00000442742 2800 ntTSL 1 (best) BASIC8.65□□□□□ -1.028e-7■■■■□ 19.5
CSTF2P33240 FBXL4-202ENST00000369244 8035 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.238e-7■■■■□ 19.5
CSTF2P33240 CASK-204ENST00000378166 3123 ntAPPRIS P3 TSL 1 (best) BASIC7.24□□□□□ -1.258e-7■■■■□ 19.5
CSTF2P33240 MBNL1-216ENST00000478535 1451 ntTSL 1 (best)7.03□□□□□ -1.288e-7■■■■□ 19.5
CSTF2P33240 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.43□□□□□ -1.548e-7■■■■□ 19.5
CSTF2P33240 CASK-207ENST00000421587 8204 ntAPPRIS ALT2 TSL 1 (best) BASIC4.56□□□□□ -1.688e-7■■■■□ 19.5
CSTF2P33240 MIPOL1-209ENST00000554930 1377 ntTSL 512.75□□□□□ -0.372e-6■■■■□ 19.5
CSTF2P33240 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.73e-6■■■■□ 19.5
CSTF2P33240 SGTA-204ENST00000589251 637 ntTSL 313.46□□□□□ -0.253e-6■■■■□ 19.5
CSTF2P33240 RAD54B-202ENST00000336148 3068 ntAPPRIS P1 TSL 1 (best) BASIC7.28□□□□□ -1.242e-6■■■■□ 19.5
CSTF2P33240 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.59□□□□□ -1.672e-6■■■■□ 19.5
CSTF2P33240 FSBP-202ENST00000517506 2472 ntTSL 54.42□□□□□ -1.72e-6■■■■□ 19.5
CSTF2P33240 RPL31-201ENST00000264258 1865 ntAPPRIS P3 TSL 1 (best) BASIC9.72□□□□□ -0.851e-7■■■■□ 19.4
CSTF2P33240 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC18.02■□□□□ 0.481e-6■■■■□ 19.4
CSTF2P33240 RAB11FIP3-201ENST00000262305 4831 ntAPPRIS P2 TSL 1 (best) BASIC21.11■□□□□ 0.972e-17■■■■□ 19.4
CSTF2P33240 RAB11FIP3-204ENST00000449879 580 ntTSL 316.45■□□□□ 0.222e-17■■■■□ 19.4
CSTF2P33240 RAB11FIP3-206ENST00000452814 804 ntTSL 515.59■□□□□ 0.092e-17■■■■□ 19.4
CSTF2P33240 RAB11FIP3-203ENST00000434585 3550 ntAPPRIS ALT2 TSL 511.61□□□□□ -0.552e-17■■■■□ 19.4
CSTF2P33240 RAB11FIP3-205ENST00000450428 3203 ntTSL 2 BASIC11.56□□□□□ -0.562e-17■■■■□ 19.4
CSTF2P33240 EPC2-203ENST00000409654 1624 ntTSL 3 BASIC11.02□□□□□ -0.641e-6■■■■□ 19.4
CSTF2P33240 PTCHD4-201ENST00000339488 2850 ntAPPRIS P1 TSL 2 BASIC9.63□□□□□ -0.871e-6■■■■□ 19.4
CSTF2P33240 PTCHD4-202ENST00000398738 3232 ntTSL 1 (best)9.41□□□□□ -0.91e-6■■■■□ 19.4
CSTF2P33240 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.18■□□□□ 0.53e-6■■■■□ 19.4
CSTF2P33240 TNFRSF19-205ENST00000464735 660 ntTSL 216.62■□□□□ 0.253e-6■■■■□ 19.4
CSTF2P33240 TNFRSF19-201ENST00000248484 3276 ntAPPRIS ALT2 TSL 1 (best) BASIC8.93□□□□□ -0.983e-6■■■■□ 19.4
CSTF2P33240 TNFRSF19-204ENST00000403372 4277 ntAPPRIS ALT2 TSL 2 BASIC7.78□□□□□ -1.163e-6■■■■□ 19.4
CSTF2P33240 TNFRSF19-203ENST00000382263 4151 ntAPPRIS ALT2 TSL 1 (best) BASIC7.25□□□□□ -1.253e-6■■■■□ 19.4
CSTF2P33240 PLEKHA6-204ENST00000564627 275 ntTSL 313.73□□□□□ -0.211e-6■■■■□ 19.4
CSTF2P33240 PLEKHA6-202ENST00000414478 5091 ntTSL 5 BASIC11.53□□□□□ -0.561e-6■■■■□ 19.4
CSTF2P33240 PLEKHA6-201ENST00000272203 7401 ntAPPRIS P1 TSL 1 (best) BASIC11.18□□□□□ -0.621e-6■■■■□ 19.4
CSTF2P33240 CAMTA1-201ENST00000303635 8444 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.066e-9■■■■□ 19.4
CSTF2P33240 VDAC1-204ENST00000425992 703 ntTSL 323.3■■□□□ 1.322e-6■■■■□ 19.3
CSTF2P33240 VDAC1-203ENST00000395047 1873 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.92e-6■■■■□ 19.3
CSTF2P33240 VDAC1-201ENST00000265333 1953 ntAPPRIS P1 TSL 2 BASIC13.69□□□□□ -0.222e-6■■■■□ 19.3
CSTF2P33240 VDAC1-202ENST00000395044 1807 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.632e-6■■■■□ 19.3
CSTF2P33240 VDAC1-205ENST00000466080 831 ntTSL 36.34□□□□□ -1.392e-6■■■■□ 19.3
Retrieved 100 of 6,735 protein–RNA pairs in 55.3 ms