RNA–Protein interactions for RNA: ENST00000378166.8

CASK-204, Transcript of calcium/calmodulin dependent serine protein kinase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CASK, Length 3,123 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASK-204ENST00000378166 NISCHQ9Y2I1 1504 aa16.74■□□□□ 0.27
CASK-204ENST00000378166 CHIC1Q5VXU3 224 aa16.07■□□□□ 0.16
CASK-204ENST00000378166 SLC24A1O60721 1099 aa15.7■□□□□ 0.1
CASK-204ENST00000378166 AEBP2Q6ZN18 517 aaPredicted RBP15.16■□□□□ 0.02
CASK-204ENST00000378166 EHMT2Q96KQ7 1210 aa15.1■□□□□ 0.01
CASK-204ENST00000378166 PLPPR3Q6T4P5 718 aa14.56□□□□□ -0.08
CASK-204ENST00000378166 PHF23Q9BUL5 403 aaPredicted RBP14.52□□□□□ -0.08
CASK-204ENST00000378166 RTN4Q9NQC3 1192 aaKnown RBP14.41□□□□□ -0.1
CASK-204ENST00000378166 CCDC180Q9P1Z9 1646 aa14.41□□□□□ -0.1
CASK-204ENST00000378166 ZCCHC6Q5VYS8 1495 aaKnown RBP14.14□□□□□ -0.15
CASK-204ENST00000378166 CSRNP3Q8WYN3 585 aa14.11□□□□□ -0.15
CASK-204ENST00000378166 KCNA4P22459 653 aa14.06□□□□□ -0.16
CASK-204ENST00000378166 AMER1Q5JTC6 1135 aaPredicted RBP14.05□□□□□ -0.16
CASK-204ENST00000378166 NCBP3Q53F19 620 aaKnown RBP13.99□□□□□ -0.17
CASK-204ENST00000378166 DAXXQ9UER7 740 aaPredicted RBP13.96□□□□□ -0.18
CASK-204ENST00000378166 SHROOM4Q9ULL8 1493 aa13.92□□□□□ -0.18
CASK-204ENST00000378166 DCAF1Q9Y4B6 1507 aa13.82□□□□□ -0.2
CASK-204ENST00000378166 ABCC9O60706 1549 aa13.8□□□□□ -0.2
CASK-204ENST00000378166 PRKCSHP14314 528 aaPredicted RBP13.68□□□□□ -0.22
CASK-204ENST00000378166 DCAF8L2P0C7V8 631 aa13.67□□□□□ -0.22
CASK-204ENST00000378166 SUPT5HO00267 1087 aaKnown RBP13.55□□□□□ -0.24
CASK-204ENST00000378166 MYO15BQ96JP2 1530 aa13.52□□□□□ -0.25
CASK-204ENST00000378166 SLC4A1APQ9BWU0 796 aaKnown RBP13.45□□□□□ -0.26
CASK-204ENST00000378166 SCRIBQ14160 1630 aa13.33□□□□□ -0.28
CASK-204ENST00000378166 TIMELESSQ9UNS1 1208 aa13.32□□□□□ -0.28
CASK-204ENST00000378166 NACADO15069 1562 aa13.32□□□□□ -0.28
CASK-204ENST00000378166 ARXQ96QS3 562 aa13.3□□□□□ -0.28
CASK-204ENST00000378166 TAOK2Q9UL54 1235 aa13.25□□□□□ -0.29
CASK-204ENST00000378166 RSF1Q96T23 1441 aaPredicted RBP13.13□□□□□ -0.31
CASK-204ENST00000378166 TULP1O00294 542 aaPredicted RBP13.12□□□□□ -0.31
CASK-204ENST00000378166 RB1CC1Q8TDY2 1594 aa13.12□□□□□ -0.31
CASK-204ENST00000378166 ADRA2BP18089 450 aa13.1□□□□□ -0.31
CASK-204ENST00000378166 BCANQ96GW7 911 aa13.08□□□□□ -0.31
CASK-204ENST00000378166 PABPN1Q86U42 306 aaKnown RBP eCLIP13.06□□□□□ -0.32
CASK-204ENST00000378166 TPRNQ4KMQ1 711 aa13.03□□□□□ -0.32
CASK-204ENST00000378166 ZBTB22O15209 634 aa13.02□□□□□ -0.33
CASK-204ENST00000378166 CECR2Q9BXF3 1484 aa13.01□□□□□ -0.33
CASK-204ENST00000378166 PLCB2Q00722 1185 aa12.97□□□□□ -0.33
CASK-204ENST00000378166 MROH2BQ7Z745 1585 aa12.97□□□□□ -0.33
CASK-204ENST00000378166 UNC13AQ9UPW8 1703 aa12.97□□□□□ -0.33
CASK-204ENST00000378166 APLP2Q06481 763 aa12.91□□□□□ -0.34
CASK-204ENST00000378166 WIZO95785 1651 aa12.9□□□□□ -0.34
CASK-204ENST00000378166 HOMEZQ8IX15 550 aa12.89□□□□□ -0.35
CASK-204ENST00000378166 BAZ1AQ9NRL2 1556 aaPredicted RBP12.87□□□□□ -0.35
CASK-204ENST00000378166 HAP1P54257 671 aaPredicted RBP12.82□□□□□ -0.36
CASK-204ENST00000378166 SMARCA4P51532 1647 aa12.8□□□□□ -0.36
CASK-204ENST00000378166 RANGAP1P46060 587 aaPredicted RBP12.79□□□□□ -0.36
CASK-204ENST00000378166 BICRAQ9NZM4 1560 aa12.79□□□□□ -0.36
CASK-204ENST00000378166 DNAJC5BQ9UF47 199 aa12.75□□□□□ -0.37
CASK-204ENST00000378166 GTF3C3Q9Y5Q9 886 aa12.73□□□□□ -0.37
CASK-204ENST00000378166 TOP2AP11388 1531 aaKnown RBP12.73□□□□□ -0.37
CASK-204ENST00000378166 EIF4G1Q04637 1599 aaKnown RBP12.72□□□□□ -0.37
CASK-204ENST00000378166 LOC105371045A0A1W2PR82 267 aa12.72□□□□□ -0.37
CASK-204ENST00000378166 TRIM41Q8WV44 630 aa12.69□□□□□ -0.38
CASK-204ENST00000378166 TTBK1Q5TCY1 1321 aaPredicted RBP12.69□□□□□ -0.38
CASK-204ENST00000378166 PELP1Q8IZL8 1130 aaKnown RBP12.69□□□□□ -0.38
CASK-204ENST00000378166 PODXL2Q9NZ53 605 aa12.64□□□□□ -0.39
CASK-204ENST00000378166 SMARCA2P51531 1590 aa12.64□□□□□ -0.39
CASK-204ENST00000378166 PEG3Q9GZU2 1588 aa12.63□□□□□ -0.39
CASK-204ENST00000378166 CCDC88BA6NC98 1476 aa12.63□□□□□ -0.39
CASK-204ENST00000378166 KLHL34Q8N239 644 aa12.62□□□□□ -0.39
CASK-204ENST00000378166 FKBP8Q14318 412 aa12.62□□□□□ -0.39
CASK-204ENST00000378166 ERICH6Q7L0X2 663 aa12.61□□□□□ -0.39
CASK-204ENST00000378166 NPM3O75607 178 aaKnown RBP12.56□□□□□ -0.4
CASK-204ENST00000378166 VSIG10Q8N0Z9 540 aa12.5□□□□□ -0.41
CASK-204ENST00000378166 ABCC8Q09428 1581 aa12.49□□□□□ -0.41
CASK-204ENST00000378166 FAM9AQ8IZU1 332 aaPredicted RBP12.49□□□□□ -0.41
CASK-204ENST00000378166 PCGF6Q9BYE7 350 aa12.49□□□□□ -0.41
CASK-204ENST00000378166 ATAD2BQ9ULI0 1458 aa12.49□□□□□ -0.41
CASK-204ENST00000378166 TMEM132AQ24JP5 1023 aa12.46□□□□□ -0.42
CASK-204ENST00000378166 MYT1Q01538 1121 aa12.45□□□□□ -0.42
CASK-204ENST00000378166 KDM2AQ9Y2K7 1162 aa12.44□□□□□ -0.42
CASK-204ENST00000378166 HRCP23327 699 aa12.43□□□□□ -0.42
CASK-204ENST00000378166 BAZ1BQ9UIG0 1483 aaKnown RBP12.41□□□□□ -0.42
CASK-204ENST00000378166 TRIM26Q12899 539 aaPredicted RBP12.38□□□□□ -0.43
CASK-204ENST00000378166 PPP6R1Q9UPN7 881 aa12.37□□□□□ -0.43
CASK-204ENST00000378166 FBLN2P98095 1184 aa12.34□□□□□ -0.43
CASK-204ENST00000378166 C14orf37Q86TY3 774 aa12.34□□□□□ -0.43
CASK-204ENST00000378166 PPP4R3CPQ6ZMV5 832 aa12.33□□□□□ -0.44
CASK-204ENST00000378166 SOGA1O94964 1423 aa12.33□□□□□ -0.44
CASK-204ENST00000378166 WRNQ14191 1432 aaPredicted RBP eCLIP12.32□□□□□ -0.44
CASK-204ENST00000378166 HMGXB3Q12766 1538 aa12.32□□□□□ -0.44
CASK-204ENST00000378166 NPM2Q86SE8 214 aaKnown RBP12.32□□□□□ -0.44
CASK-204ENST00000378166 NCAPD3P42695 1498 aa12.31□□□□□ -0.44
CASK-204ENST00000378166 EEA1Q15075 1411 aa12.31□□□□□ -0.44
CASK-204ENST00000378166 SYNJ1O43426 1573 aa12.3□□□□□ -0.44
CASK-204ENST00000378166 CC2D2AQ9P2K1 1620 aa12.3□□□□□ -0.44
CASK-204ENST00000378166 RUSC2Q8N2Y8 1516 aa12.28□□□□□ -0.44
CASK-204ENST00000378166 SENP3Q9H4L4 574 aaPredicted RBP12.28□□□□□ -0.44
CASK-204ENST00000378166 TNIKQ9UKE5 1360 aa12.22□□□□□ -0.45
CASK-204ENST00000378166 FOXD4L1Q9NU39 408 aa12.22□□□□□ -0.45
CASK-204ENST00000378166 TOP2BQ02880 1626 aa12.21□□□□□ -0.46
CASK-204ENST00000378166 BIVM-ERCC5R4GMW8 1640 aa12.19□□□□□ -0.46
CASK-204ENST00000378166 CEP162Q5TB80 1403 aa12.19□□□□□ -0.46
CASK-204ENST00000378166 KIF21BO75037 1637 aa12.17□□□□□ -0.46
CASK-204ENST00000378166 GOLGA3Q08378 1498 aa12.17□□□□□ -0.46
CASK-204ENST00000378166 CFTRP13569 1480 aa12.15□□□□□ -0.47
CASK-204ENST00000378166 CEP164Q9UPV0 1460 aa12.13□□□□□ -0.47
CASK-204ENST00000378166 PRDM2Q13029 1718 aa12.13□□□□□ -0.47
CASK-204ENST00000378166 PPARGC1BQ86YN6 1023 aaKnown RBP12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms