RNA–Protein interactions for RNA: ENST00000421587.6

CASK-207, Transcript of calcium/calmodulin dependent serine protein kinase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CASK, Length 8,204 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASK-207ENST00000421587 NISCHQ9Y2I1 1504 aa9.74□□□□□ -0.85
CASK-207ENST00000421587 CCDC180Q9P1Z9 1646 aa8.74□□□□□ -1.01
CASK-207ENST00000421587 DCAF1Q9Y4B6 1507 aa8.44□□□□□ -1.06
CASK-207ENST00000421587 MYO15BQ96JP2 1530 aa8.37□□□□□ -1.07
CASK-207ENST00000421587 ZCCHC6Q5VYS8 1495 aaKnown RBP8.3□□□□□ -1.08
CASK-207ENST00000421587 DCAF8L2P0C7V8 631 aa8.27□□□□□ -1.09
CASK-207ENST00000421587 NACADO15069 1562 aa7.98□□□□□ -1.13
CASK-207ENST00000421587 SHROOM4Q9ULL8 1493 aa7.93□□□□□ -1.14
CASK-207ENST00000421587 ABCC9O60706 1549 aa7.84□□□□□ -1.15
CASK-207ENST00000421587 RB1CC1Q8TDY2 1594 aa7.78□□□□□ -1.16
CASK-207ENST00000421587 BAZ1AQ9NRL2 1556 aaPredicted RBP7.62□□□□□ -1.19
CASK-207ENST00000421587 PEG3Q9GZU2 1588 aa7.59□□□□□ -1.19
CASK-207ENST00000421587 SMARCA2P51531 1590 aa7.53□□□□□ -1.2
CASK-207ENST00000421587 RSF1Q96T23 1441 aaPredicted RBP7.49□□□□□ -1.21
CASK-207ENST00000421587 SCRIBQ14160 1630 aa7.49□□□□□ -1.21
CASK-207ENST00000421587 TOP2AP11388 1531 aaKnown RBP7.48□□□□□ -1.21
CASK-207ENST00000421587 EEA1Q15075 1411 aa7.46□□□□□ -1.22
CASK-207ENST00000421587 FAM9AQ8IZU1 332 aaPredicted RBP7.45□□□□□ -1.22
CASK-207ENST00000421587 SMARCA4P51532 1647 aa7.45□□□□□ -1.22
CASK-207ENST00000421587 EIF4G1Q04637 1599 aaKnown RBP7.42□□□□□ -1.22
CASK-207ENST00000421587 HMGXB3Q12766 1538 aa7.4□□□□□ -1.22
CASK-207ENST00000421587 UNC13AQ9UPW8 1703 aa7.37□□□□□ -1.23
CASK-207ENST00000421587 BICRAQ9NZM4 1560 aa7.33□□□□□ -1.24
CASK-207ENST00000421587 MROH2BQ7Z745 1585 aa7.32□□□□□ -1.24
CASK-207ENST00000421587 CHIC1Q5VXU3 224 aa7.31□□□□□ -1.24
CASK-207ENST00000421587 SUPT5HO00267 1087 aaKnown RBP7.28□□□□□ -1.24
CASK-207ENST00000421587 PRDM2Q13029 1718 aa7.27□□□□□ -1.25
CASK-207ENST00000421587 NCAPD3P42695 1498 aa7.26□□□□□ -1.25
CASK-207ENST00000421587 BAZ1BQ9UIG0 1483 aaKnown RBP7.23□□□□□ -1.25
CASK-207ENST00000421587 WRNQ14191 1432 aaPredicted RBP eCLIP7.22□□□□□ -1.25
CASK-207ENST00000421587 CECR2Q9BXF3 1484 aa7.22□□□□□ -1.25
CASK-207ENST00000421587 WIZO95785 1651 aa7.22□□□□□ -1.25
CASK-207ENST00000421587 KIF21BO75037 1637 aa7.21□□□□□ -1.25
CASK-207ENST00000421587 ATAD2BQ9ULI0 1458 aa7.2□□□□□ -1.26
CASK-207ENST00000421587 BIVM-ERCC5R4GMW8 1640 aa7.2□□□□□ -1.26
CASK-207ENST00000421587 ERICH3Q5RHP9 1530 aa7.19□□□□□ -1.26
CASK-207ENST00000421587 CCDC88BA6NC98 1476 aa7.16□□□□□ -1.26
CASK-207ENST00000421587 TOP2BQ02880 1626 aa7.15□□□□□ -1.26
CASK-207ENST00000421587 ZEB1P37275 1124 aaPredicted RBP7.15□□□□□ -1.26
CASK-207ENST00000421587 WDR97A6NE52 1622 aa7.15□□□□□ -1.26
CASK-207ENST00000421587 EHMT2Q96KQ7 1210 aa7.14□□□□□ -1.27
CASK-207ENST00000421587 CEP164Q9UPV0 1460 aa7.13□□□□□ -1.27
CASK-207ENST00000421587 APLP2Q06481 763 aa7.13□□□□□ -1.27
CASK-207ENST00000421587 ABCC8Q09428 1581 aa7.13□□□□□ -1.27
CASK-207ENST00000421587 TNIKQ9UKE5 1360 aa7.12□□□□□ -1.27
CASK-207ENST00000421587 GOLGA3Q08378 1498 aa7.11□□□□□ -1.27
CASK-207ENST00000421587 CFTRP13569 1480 aa7.1□□□□□ -1.27
CASK-207ENST00000421587 MAP3K1Q13233 1512 aa7.08□□□□□ -1.28
CASK-207ENST00000421587 TRIM41Q8WV44 630 aa7.07□□□□□ -1.28
CASK-207ENST00000421587 MYT1LQ9UL68 1186 aa7.05□□□□□ -1.28
CASK-207ENST00000421587 ATP1B4Q9UN42 357 aaPredicted RBP7.05□□□□□ -1.28
CASK-207ENST00000421587 ACIN1Q9UKV3 1341 aaKnown RBP7.04□□□□□ -1.28
CASK-207ENST00000421587 LAMC3Q9Y6N6 1575 aa7.02□□□□□ -1.28
CASK-207ENST00000421587 CC2D2AQ9P2K1 1620 aa7.02□□□□□ -1.29
CASK-207ENST00000421587 TRIM26Q12899 539 aaPredicted RBP7.02□□□□□ -1.29
CASK-207ENST00000421587 KIF21AQ7Z4S6 1674 aa7□□□□□ -1.29
CASK-207ENST00000421587 RANGAP1P46060 587 aaPredicted RBP7□□□□□ -1.29
CASK-207ENST00000421587 CUL7Q14999 1698 aa7□□□□□ -1.29
CASK-207ENST00000421587 EFCAB5A4FU69 1503 aa6.99□□□□□ -1.29
CASK-207ENST00000421587 PRXQ9BXM0 1461 aa6.99□□□□□ -1.29
CASK-207ENST00000421587 THOC2Q8NI27 1593 aaKnown RBP6.98□□□□□ -1.29
CASK-207ENST00000421587 TTBK1Q5TCY1 1321 aaPredicted RBP6.98□□□□□ -1.29
CASK-207ENST00000421587 KIF27Q86VH2 1401 aa6.98□□□□□ -1.29
CASK-207ENST00000421587 SYNJ1O43426 1573 aa6.98□□□□□ -1.29
CASK-207ENST00000421587 DNMBPQ6XZF7 1577 aa6.98□□□□□ -1.29
CASK-207ENST00000421587 CLSPNQ9HAW4 1339 aa6.97□□□□□ -1.29
CASK-207ENST00000421587 HRCP23327 699 aa6.96□□□□□ -1.29
CASK-207ENST00000421587 VPS8Q8N3P4 1428 aa6.95□□□□□ -1.3
CASK-207ENST00000421587 AQRO60306 1485 aaKnown RBP eCLIP6.95□□□□□ -1.3
CASK-207ENST00000421587 CADPSQ9ULU8 1353 aa6.95□□□□□ -1.3
CASK-207ENST00000421587 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.94□□□□□ -1.3
CASK-207ENST00000421587 HNRNPUL2Q1KMD3 747 aaKnown RBP6.94□□□□□ -1.3
CASK-207ENST00000421587 CEP162Q5TB80 1403 aa6.94□□□□□ -1.3
CASK-207ENST00000421587 ABCA10Q8WWZ4 1543 aa6.93□□□□□ -1.3
CASK-207ENST00000421587 CSRNP3Q8WYN3 585 aa6.93□□□□□ -1.3
CASK-207ENST00000421587 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.91□□□□□ -1.3
CASK-207ENST00000421587 FHAD1B1AJZ9 1412 aa6.9□□□□□ -1.31
CASK-207ENST00000421587 CUX2O14529 1486 aa6.9□□□□□ -1.31
CASK-207ENST00000421587 CLIP1P30622 1438 aa6.88□□□□□ -1.31
CASK-207ENST00000421587 PABPN1Q86U42 306 aaKnown RBP eCLIP6.88□□□□□ -1.31
CASK-207ENST00000421587 CUX1P39880 1505 aa6.88□□□□□ -1.31
CASK-207ENST00000421587 PDS5BQ9NTI5 1447 aa6.88□□□□□ -1.31
CASK-207ENST00000421587 RAPGEF2Q9Y4G8 1499 aa6.86□□□□□ -1.31
CASK-207ENST00000421587 CFAP43Q8NDM7 1665 aa6.85□□□□□ -1.31
CASK-207ENST00000421587 ABCA5Q8WWZ7 1642 aa6.85□□□□□ -1.31
CASK-207ENST00000421587 FYCO1Q9BQS8 1478 aa6.84□□□□□ -1.32
CASK-207ENST00000421587 FBLN2P98095 1184 aa6.83□□□□□ -1.32
CASK-207ENST00000421587 CTTNBP2Q8WZ74 1663 aa6.82□□□□□ -1.32
CASK-207ENST00000421587 UBTFP17480 764 aaKnown RBP6.82□□□□□ -1.32
CASK-207ENST00000421587 FANCD2Q9BXW9 1451 aa6.82□□□□□ -1.32
CASK-207ENST00000421587 RRBP1Q9P2E9 1410 aaKnown RBP6.81□□□□□ -1.32
CASK-207ENST00000421587 SOGA1O94964 1423 aa6.81□□□□□ -1.32
CASK-207ENST00000421587 FMN1Q68DA7 1419 aa6.81□□□□□ -1.32
CASK-207ENST00000421587 AKNAQ7Z591 1439 aa6.81□□□□□ -1.32
CASK-207ENST00000421587 SAMD9Q5K651 1589 aa6.8□□□□□ -1.32
CASK-207ENST00000421587 TOPBP1Q92547 1522 aa6.8□□□□□ -1.32
CASK-207ENST00000421587 CCDC18Q5T9S5 1454 aa6.79□□□□□ -1.32
CASK-207ENST00000421587 FGD5Q6ZNL6 1462 aa6.79□□□□□ -1.32
CASK-207ENST00000421587 TIMELESSQ9UNS1 1208 aa6.79□□□□□ -1.32
CASK-207ENST00000421587 WDR62O43379 1518 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms