Protein–RNA interactions for Protein: P27797

CALR, Calreticulin, humanhuman

Known RBP Predictions only

Length 417 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALRP27797 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CALRP27797 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CALRP27797 CELF5-201ENST00000292672 1854 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CALRP27797 PTOV1-201ENST00000391842 1875 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
CALRP27797 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.97■□□□□ 0.95
CALRP27797 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC20.97■□□□□ 0.95
CALRP27797 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CALRP27797 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CALRP27797 E2F5-202ENST00000416274 1728 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
CALRP27797 UBR2-203ENST00000372903 2423 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CALRP27797 AC099805.1-201ENST00000523987 1797 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
CALRP27797 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
CALRP27797 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC20.96■□□□□ 0.95
CALRP27797 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CALRP27797 EPCAM-201ENST00000263735 1724 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CALRP27797 TRIB3-201ENST00000217233 2499 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CALRP27797 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
CALRP27797 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.96■□□□□ 0.95
CALRP27797 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CALRP27797 SYNGR3-201ENST00000248121 2051 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CALRP27797 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
CALRP27797 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
CALRP27797 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CALRP27797 DHRS13-203ENST00000426464 1569 ntTSL 2 BASIC20.96■□□□□ 0.95
CALRP27797 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CALRP27797 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CALRP27797 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CALRP27797 TSEN15-201ENST00000361641 1960 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CALRP27797 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
CALRP27797 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
CALRP27797 ASCL4-201ENST00000342331 2260 ntAPPRIS P1 BASIC20.95■□□□□ 0.95
CALRP27797 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CALRP27797 SLC35B2-202ENST00000393812 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CALRP27797 DCUN1D2-208ENST00000478244 2045 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CALRP27797 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CALRP27797 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
CALRP27797 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
CALRP27797 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC20.95■□□□□ 0.94
CALRP27797 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC20.95■□□□□ 0.94
CALRP27797 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CALRP27797 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CALRP27797 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.95■□□□□ 0.94
CALRP27797 USP2-204ENST00000525735 1704 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CALRP27797 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CALRP27797 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CALRP27797 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CALRP27797 ERLEC1-202ENST00000378239 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
CALRP27797 TMEM235-205ENST00000586400 2272 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CALRP27797 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC20.94■□□□□ 0.94
CALRP27797 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CALRP27797 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CALRP27797 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CALRP27797 CRACR2B-201ENST00000450448 1663 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CALRP27797 RDX-204ENST00000528498 2511 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CALRP27797 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CALRP27797 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC20.94■□□□□ 0.94
CALRP27797 VAX1-202ENST00000369206 1723 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
CALRP27797 UBTD1-201ENST00000370664 1706 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CALRP27797 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CALRP27797 PSPH-202ENST00000395471 2178 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CALRP27797 GAL3ST1-202ENST00000401975 1791 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CALRP27797 DVL1-204ENST00000610709 2268 ntTSL 2 BASIC20.94■□□□□ 0.94
CALRP27797 PQLC3-201ENST00000295083 1830 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CALRP27797 KCNH2-201ENST00000262186 4286 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CALRP27797 SLC25A23-203ENST00000334510 1424 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CALRP27797 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
CALRP27797 ACVRL1-201ENST00000388922 1971 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CALRP27797 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CALRP27797 CCDC47-204ENST00000582252 1719 ntTSL 2 BASIC20.93■□□□□ 0.94
CALRP27797 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC20.93■□□□□ 0.94
CALRP27797 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC20.93■□□□□ 0.94
CALRP27797 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC20.93■□□□□ 0.94
CALRP27797 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CALRP27797 TMED2-201ENST00000262225 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CALRP27797 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC20.92■□□□□ 0.94
CALRP27797 MAP7-206ENST00000611373 2317 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CALRP27797 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.92■□□□□ 0.94
CALRP27797 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
CALRP27797 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CALRP27797 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.92■□□□□ 0.94
CALRP27797 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
CALRP27797 RFXAP-201ENST00000255476 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CALRP27797 TMIE-201ENST00000326431 1824 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CALRP27797 FAM78B-201ENST00000338353 1597 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CALRP27797 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC20.91■□□□□ 0.94
CALRP27797 FBXL19-205ENST00000562319 2462 ntAPPRIS ALT2 TSL 2 BASIC20.91■□□□□ 0.94
CALRP27797 IFNL4-201ENST00000606380 1637 ntAPPRIS P5 TSL 1 (best) BASIC20.91■□□□□ 0.94
CALRP27797 BID-212ENST00000614949 1988 ntTSL 5 BASIC20.91■□□□□ 0.94
CALRP27797 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CALRP27797 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC20.91■□□□□ 0.94
CALRP27797 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CALRP27797 UBR3-201ENST00000272793 8005 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CALRP27797 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CALRP27797 CBARP-202ENST00000382477 2453 ntAPPRIS ALT2 TSL 5 BASIC20.9■□□□□ 0.94
CALRP27797 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CALRP27797 PODN-203ENST00000395871 2744 ntTSL 5 BASIC20.9■□□□□ 0.94
CALRP27797 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC20.9■□□□□ 0.94
CALRP27797 AC087741.3-201ENST00000624270 1347 ntBASIC20.9■□□□□ 0.94
CALRP27797 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.9■□□□□ 0.94
CALRP27797 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.9■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 50 ms