Protein–RNA interactions for Protein: P24347

MMP11, Stromelysin-3, humanhuman

Predictions only

Length 488 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11P24347 HAUS7-202ENST00000370211 1363 ntAPPRIS P2 TSL 1 (best) BASIC20.95■□□□□ 0.94
MMP11P24347 HTATSF1-201ENST00000218364 2775 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
MMP11P24347 NKX2-1-201ENST00000354822 2191 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
MMP11P24347 CDC16-206ENST00000375310 2156 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
MMP11P24347 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MMP11P24347 IQCD-203ENST00000546692 1872 ntTSL 5 BASIC20.94■□□□□ 0.94
MMP11P24347 DTNB-210ENST00000407186 2275 ntTSL 5 BASIC20.94■□□□□ 0.94
MMP11P24347 IRF3-228ENST00000601291 1556 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
MMP11P24347 C21orf2-203ENST00000397956 1634 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
MMP11P24347 CLYBL-202ENST00000376354 1127 ntTSL 5 BASIC20.94■□□□□ 0.94
MMP11P24347 CDX1-201ENST00000231656 1758 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
MMP11P24347 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
MMP11P24347 SLC35B2-201ENST00000393810 1898 ntTSL 2 BASIC20.94■□□□□ 0.94
MMP11P24347 MTMR14-202ENST00000351233 2105 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
MMP11P24347 WT1-204ENST00000448076 2114 ntAPPRIS ALT2 TSL 2 BASIC20.93■□□□□ 0.94
MMP11P24347 NCK2-201ENST00000233154 2683 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
MMP11P24347 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
MMP11P24347 PPP1R1B-201ENST00000254079 1845 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MMP11P24347 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
MMP11P24347 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
MMP11P24347 CCDC85B-201ENST00000312579 1524 ntAPPRIS P1 BASIC20.93■□□□□ 0.94
MMP11P24347 DONSON-210ENST00000453626 2332 ntTSL 5 BASIC20.93■□□□□ 0.94
MMP11P24347 ANOS2P-203ENST00000472227 1816 ntBASIC20.92■□□□□ 0.94
MMP11P24347 SIMC1-204ENST00000430704 1925 ntAPPRIS P3 TSL 2 BASIC20.92■□□□□ 0.94
MMP11P24347 ARRDC1-AS1-203ENST00000623970 2210 ntTSL 5 BASIC20.92■□□□□ 0.94
MMP11P24347 SCRT2-201ENST00000246104 3577 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MMP11P24347 IRS3P-201ENST00000223076 1006 ntBASIC20.92■□□□□ 0.94
MMP11P24347 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC20.92■□□□□ 0.94
MMP11P24347 NGEF-203ENST00000409079 1022 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
MMP11P24347 AF117829.1-201ENST00000519655 1398 ntTSL 5 BASIC20.92■□□□□ 0.94
MMP11P24347 ARIH2OS-201ENST00000408959 1598 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
MMP11P24347 SAMD8-202ENST00000372690 1654 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
MMP11P24347 IFNGR2-202ENST00000381995 1742 ntAPPRIS ALT2 TSL 5 BASIC20.92■□□□□ 0.94
MMP11P24347 ASF1B-201ENST00000263382 2059 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
MMP11P24347 GALC-202ENST00000393568 2054 ntTSL 2 BASIC20.92■□□□□ 0.94
MMP11P24347 AFDN-AS1-201ENST00000359760 2238 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
MMP11P24347 ARPC5L-201ENST00000259477 1325 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
MMP11P24347 CDC37L1-202ENST00000381858 1244 ntTSL 5 BASIC20.91■□□□□ 0.94
MMP11P24347 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC20.91■□□□□ 0.94
MMP11P24347 COMT-206ENST00000407537 1457 ntAPPRIS P3 TSL 5 BASIC20.91■□□□□ 0.94
MMP11P24347 GRAMD4P2-201ENST00000423297 1097 ntBASIC20.91■□□□□ 0.94
MMP11P24347 DNAAF3-203ENST00000524407 2059 ntAPPRIS ALT2 TSL 1 (best) BASIC20.91■□□□□ 0.94
MMP11P24347 DUX4L4-201ENST00000566884 1269 ntBASIC20.91■□□□□ 0.94
MMP11P24347 SPAG7-205ENST00000573366 1668 ntTSL 3 BASIC20.91■□□□□ 0.94
MMP11P24347 AL499627.2-201ENST00000606283 725 ntBASIC20.91■□□□□ 0.94
MMP11P24347 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC20.91■□□□□ 0.94
MMP11P24347 SPON2-222ENST00000617421 2156 ntAPPRIS P1 TSL 5 BASIC20.9■□□□□ 0.94
MMP11P24347 TMEM185B-201ENST00000426077 2131 ntAPPRIS P1 BASIC20.9■□□□□ 0.94
MMP11P24347 PXK-202ENST00000356151 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MMP11P24347 AC096541.1-201ENST00000445070 1807 ntTSL 2 BASIC20.9■□□□□ 0.94
MMP11P24347 NMI-201ENST00000243346 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MMP11P24347 AC133637.1-201ENST00000624115 1537 ntBASIC20.9■□□□□ 0.94
MMP11P24347 SIRT3-215ENST00000532956 1235 ntTSL 2 BASIC20.9■□□□□ 0.94
MMP11P24347 POLDIP2-201ENST00000540200 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
MMP11P24347 XBP1-201ENST00000216037 1850 ntAPPRIS P2 TSL 1 (best) BASIC20.9■□□□□ 0.94
MMP11P24347 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
MMP11P24347 ARF1-213ENST00000540651 1972 ntAPPRIS P1 TSL 2 BASIC20.89■□□□□ 0.93
MMP11P24347 ZC3H14-223ENST00000557607 1983 ntTSL 5 BASIC20.89■□□□□ 0.93
MMP11P24347 FLOT1-201ENST00000376389 1912 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
MMP11P24347 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC20.89■□□□□ 0.93
MMP11P24347 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
MMP11P24347 C20orf144-201ENST00000375222 571 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
MMP11P24347 IGHV3-20-201ENST00000390606 415 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
MMP11P24347 RHOF-204ENST00000537265 699 ntTSL 2 BASIC20.89■□□□□ 0.93
MMP11P24347 AC126544.1-201ENST00000580842 1059 ntBASIC20.89■□□□□ 0.93
MMP11P24347 MIR5787-201ENST00000611784 55 ntBASIC20.89■□□□□ 0.93
MMP11P24347 UBE2S-201ENST00000264552 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
MMP11P24347 RGS7-204ENST00000366565 2494 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
MMP11P24347 HAGHL-212ENST00000564537 1667 ntTSL 2 BASIC20.89■□□□□ 0.93
MMP11P24347 DONSON-204ENST00000432378 1618 ntTSL 5 BASIC20.89■□□□□ 0.93
MMP11P24347 AC144652.1-201ENST00000609974 1624 ntBASIC20.89■□□□□ 0.93
MMP11P24347 TOP2B-204ENST00000435706 5389 ntAPPRIS P3 TSL 1 (best) BASIC20.89■□□□□ 0.93
MMP11P24347 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
MMP11P24347 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC20.88■□□□□ 0.93
MMP11P24347 C5orf49-201ENST00000399810 2385 ntAPPRIS P2 TSL 1 (best) BASIC20.88■□□□□ 0.93
MMP11P24347 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MMP11P24347 RCN2-202ENST00000394883 1366 ntTSL 5 BASIC20.88■□□□□ 0.93
MMP11P24347 C12orf75-208ENST00000612117 1329 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
MMP11P24347 NDUFV2-201ENST00000318388 930 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
MMP11P24347 AC008443.4-201ENST00000503314 456 ntTSL 4 BASIC20.88■□□□□ 0.93
MMP11P24347 LYRM1-201ENST00000219168 1626 ntAPPRIS P1 TSL 2 BASIC20.88■□□□□ 0.93
MMP11P24347 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC20.87■□□□□ 0.93
MMP11P24347 IGF2-AS-201ENST00000381361 2063 ntTSL 2 BASIC20.87■□□□□ 0.93
MMP11P24347 TNFRSF10B-202ENST00000347739 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC20.87■□□□□ 0.93
MMP11P24347 LINC01529-204ENST00000636474 1715 ntBASIC20.87■□□□□ 0.93
MMP11P24347 DXO-201ENST00000337523 1628 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MMP11P24347 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MMP11P24347 RPUSD3-206ENST00000433535 1178 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
MMP11P24347 SLC47A1P1-202ENST00000449666 945 ntBASIC20.87■□□□□ 0.93
MMP11P24347 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC20.87■□□□□ 0.93
MMP11P24347 MIR6821-201ENST00000617625 74 ntBASIC20.87■□□□□ 0.93
MMP11P24347 ACAD8-202ENST00000374752 1797 ntTSL 2 BASIC20.87■□□□□ 0.93
MMP11P24347 ASRGL1-202ENST00000415229 2270 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
MMP11P24347 MAPKAPK5-AS1-201ENST00000428207 2290 ntTSL 1 (best) BASIC20.87■□□□□ 0.93
MMP11P24347 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MMP11P24347 HOXB7-201ENST00000239165 1371 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MMP11P24347 LRRC34-206ENST00000522526 1899 ntAPPRIS P3 TSL 1 (best) BASIC20.86■□□□□ 0.93
MMP11P24347 METTL23-201ENST00000341249 1155 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
MMP11P24347 TSPY4-201ENST00000383008 1143 ntAPPRIS ALT2 TSL 5 BASIC20.86■□□□□ 0.93
MMP11P24347 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 21 ms