Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
BOLA2-SMG1P6H3BVE0 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
BOLA2-SMG1P6H3BVE0 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
BOLA2-SMG1P6H3BVE0 LGR4-202ENST00000389858 5163 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
BOLA2-SMG1P6H3BVE0 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
BOLA2-SMG1P6H3BVE0 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.32■□□□□ 0.68
BOLA2-SMG1P6H3BVE0 PXK-201ENST00000302779 1974 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
BOLA2-SMG1P6H3BVE0 LRFN4-202ENST00000393952 1550 ntTSL 5 BASIC19.32■□□□□ 0.68
BOLA2-SMG1P6H3BVE0 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
BOLA2-SMG1P6H3BVE0 C19orf12-204ENST00000392276 1912 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
BOLA2-SMG1P6H3BVE0 FBXL6-202ENST00000455319 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
BOLA2-SMG1P6H3BVE0 MIR762-201ENST00000390236 83 ntBASIC19.31■□□□□ 0.68
BOLA2-SMG1P6H3BVE0 TMEM129-206ENST00000536901 2172 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
BOLA2-SMG1P6H3BVE0 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
BOLA2-SMG1P6H3BVE0 LRR1-201ENST00000298288 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
BOLA2-SMG1P6H3BVE0 ZSWIM7-201ENST00000399277 2008 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BOLA2-SMG1P6H3BVE0 TMEM9B-201ENST00000309134 1659 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
BOLA2-SMG1P6H3BVE0 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC19.3■□□□□ 0.68
BOLA2-SMG1P6H3BVE0 HMCES-204ENST00000502878 1952 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BOLA2-SMG1P6H3BVE0 NEURL4-203ENST00000570460 4890 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
BOLA2-SMG1P6H3BVE0 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.3■□□□□ 0.68
BOLA2-SMG1P6H3BVE0 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC19.3■□□□□ 0.68
BOLA2-SMG1P6H3BVE0 AC010542.4-201ENST00000563151 1910 ntBASIC19.3■□□□□ 0.68
BOLA2-SMG1P6H3BVE0 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
BOLA2-SMG1P6H3BVE0 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
BOLA2-SMG1P6H3BVE0 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BOLA2-SMG1P6H3BVE0 SUZ12P1-203ENST00000578195 985 ntBASIC19.3■□□□□ 0.68
BOLA2-SMG1P6H3BVE0 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
BOLA2-SMG1P6H3BVE0 ROGDI-201ENST00000322048 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BOLA2-SMG1P6H3BVE0 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BOLA2-SMG1P6H3BVE0 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC19.3■□□□□ 0.68
BOLA2-SMG1P6H3BVE0 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
BOLA2-SMG1P6H3BVE0 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
BOLA2-SMG1P6H3BVE0 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC19.29■□□□□ 0.68
BOLA2-SMG1P6H3BVE0 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC19.29■□□□□ 0.68
BOLA2-SMG1P6H3BVE0 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BOLA2-SMG1P6H3BVE0 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
BOLA2-SMG1P6H3BVE0 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BOLA2-SMG1P6H3BVE0 CHML-205ENST00000638160 705 ntTSL 3 BASIC19.29■□□□□ 0.68
BOLA2-SMG1P6H3BVE0 SDF4-202ENST00000360001 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
BOLA2-SMG1P6H3BVE0 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BOLA2-SMG1P6H3BVE0 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
BOLA2-SMG1P6H3BVE0 SRI-201ENST00000265729 2010 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
BOLA2-SMG1P6H3BVE0 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC19.28■□□□□ 0.68
BOLA2-SMG1P6H3BVE0 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BOLA2-SMG1P6H3BVE0 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BOLA2-SMG1P6H3BVE0 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
BOLA2-SMG1P6H3BVE0 P2RY2-203ENST00000393597 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BOLA2-SMG1P6H3BVE0 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
BOLA2-SMG1P6H3BVE0 ZDHHC5-201ENST00000287169 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
BOLA2-SMG1P6H3BVE0 SGMS1-210ENST00000619438 1680 ntTSL 5 BASIC19.27■□□□□ 0.68
BOLA2-SMG1P6H3BVE0 IQCJ-SCHIP1-203ENST00000476809 1780 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
BOLA2-SMG1P6H3BVE0 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
BOLA2-SMG1P6H3BVE0 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC19.27■□□□□ 0.68
BOLA2-SMG1P6H3BVE0 RPS2-209ENST00000529806 993 ntTSL 3 BASIC19.27■□□□□ 0.68
BOLA2-SMG1P6H3BVE0 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
BOLA2-SMG1P6H3BVE0 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
BOLA2-SMG1P6H3BVE0 AC079630.1-202ENST00000618127 1840 ntBASIC19.27■□□□□ 0.68
BOLA2-SMG1P6H3BVE0 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC19.27■□□□□ 0.67
BOLA2-SMG1P6H3BVE0 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.67
BOLA2-SMG1P6H3BVE0 HNRNPLP2-201ENST00000568980 1570 ntBASIC19.27■□□□□ 0.67
BOLA2-SMG1P6H3BVE0 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
BOLA2-SMG1P6H3BVE0 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.26■□□□□ 0.67
BOLA2-SMG1P6H3BVE0 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
BOLA2-SMG1P6H3BVE0 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BOLA2-SMG1P6H3BVE0 MGAT4B-201ENST00000292591 2446 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BOLA2-SMG1P6H3BVE0 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
BOLA2-SMG1P6H3BVE0 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
BOLA2-SMG1P6H3BVE0 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC19.26■□□□□ 0.67
BOLA2-SMG1P6H3BVE0 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
BOLA2-SMG1P6H3BVE0 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC19.26■□□□□ 0.67
BOLA2-SMG1P6H3BVE0 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
BOLA2-SMG1P6H3BVE0 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC19.25■□□□□ 0.67
BOLA2-SMG1P6H3BVE0 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
BOLA2-SMG1P6H3BVE0 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
BOLA2-SMG1P6H3BVE0 AFG3L1P-217ENST00000557444 2447 ntBASIC19.25■□□□□ 0.67
BOLA2-SMG1P6H3BVE0 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BOLA2-SMG1P6H3BVE0 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.25■□□□□ 0.67
BOLA2-SMG1P6H3BVE0 PRICKLE3-206ENST00000599218 2062 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
BOLA2-SMG1P6H3BVE0 GPR161-203ENST00000367836 1983 ntTSL 2 BASIC19.25■□□□□ 0.67
BOLA2-SMG1P6H3BVE0 HSD11B1L-217ENST00000581521 1884 ntAPPRIS P3 TSL 5 BASIC19.25■□□□□ 0.67
BOLA2-SMG1P6H3BVE0 TRIM14-203ENST00000375098 1792 ntAPPRIS P1 TSL 2 BASIC19.25■□□□□ 0.67
BOLA2-SMG1P6H3BVE0 RAB6B-203ENST00000469959 500 ntTSL 3 BASIC19.25■□□□□ 0.67
BOLA2-SMG1P6H3BVE0 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
BOLA2-SMG1P6H3BVE0 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BOLA2-SMG1P6H3BVE0 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
BOLA2-SMG1P6H3BVE0 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC19.25■□□□□ 0.67
BOLA2-SMG1P6H3BVE0 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC19.25■□□□□ 0.67
BOLA2-SMG1P6H3BVE0 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
BOLA2-SMG1P6H3BVE0 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BOLA2-SMG1P6H3BVE0 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
BOLA2-SMG1P6H3BVE0 CDKN1C-202ENST00000414822 2051 ntAPPRIS P3 TSL 1 (best) BASIC19.24■□□□□ 0.67
BOLA2-SMG1P6H3BVE0 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
BOLA2-SMG1P6H3BVE0 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.24■□□□□ 0.67
BOLA2-SMG1P6H3BVE0 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC19.24■□□□□ 0.67
BOLA2-SMG1P6H3BVE0 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
BOLA2-SMG1P6H3BVE0 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
BOLA2-SMG1P6H3BVE0 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
BOLA2-SMG1P6H3BVE0 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
BOLA2-SMG1P6H3BVE0 ZNF503-AS2-201ENST00000425916 2026 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 15.2 ms