Protein–RNA interactions for Protein: A6NGN4

PRAMEF25, PRAME family member 25, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF25A6NGN4 SUMF1-201ENST00000272902 2159 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.91
PRAMEF25A6NGN4 PGF-206ENST00000555567 1927 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
PRAMEF25A6NGN4 AL353803.4-201ENST00000565882 1934 ntBASIC20.7■□□□□ 0.91
PRAMEF25A6NGN4 LINC01116-201ENST00000295549 1407 ntTSL 2 BASIC20.7■□□□□ 0.9
PRAMEF25A6NGN4 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRAMEF25A6NGN4 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC20.7■□□□□ 0.9
PRAMEF25A6NGN4 MAST4-206ENST00000406374 1066 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PRAMEF25A6NGN4 NAA30-202ENST00000554703 795 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
PRAMEF25A6NGN4 AL591684.2-201ENST00000605970 1594 ntTSL 5 BASIC20.7■□□□□ 0.9
PRAMEF25A6NGN4 PIP5KL1-202ENST00000388747 2198 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
PRAMEF25A6NGN4 AC009102.2-201ENST00000606772 1639 ntBASIC20.7■□□□□ 0.9
PRAMEF25A6NGN4 CACNB3-205ENST00000547392 2237 ntTSL 5 BASIC20.7■□□□□ 0.9
PRAMEF25A6NGN4 AC008406.3-201ENST00000620001 1374 ntBASIC20.7■□□□□ 0.9
PRAMEF25A6NGN4 BX088645.1-201ENST00000636699 1728 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
PRAMEF25A6NGN4 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC20.69■□□□□ 0.9
PRAMEF25A6NGN4 SPOCK3-222ENST00000512681 1457 ntTSL 2 BASIC20.69■□□□□ 0.9
PRAMEF25A6NGN4 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PRAMEF25A6NGN4 PLPP1-202ENST00000307259 1597 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRAMEF25A6NGN4 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRAMEF25A6NGN4 TDRKH-205ENST00000368827 2318 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRAMEF25A6NGN4 EMC9-201ENST00000216799 835 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRAMEF25A6NGN4 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
PRAMEF25A6NGN4 PRELID1-203ENST00000503216 1171 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PRAMEF25A6NGN4 MYBL1-201ENST00000517885 1714 ntTSL 5 BASIC20.69■□□□□ 0.9
PRAMEF25A6NGN4 ZNF395-210ENST00000523095 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
PRAMEF25A6NGN4 PFKFB4-202ENST00000383734 1491 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
PRAMEF25A6NGN4 SLC35F4-206ENST00000556826 1908 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
PRAMEF25A6NGN4 WDR86-208ENST00000628331 1905 ntTSL 5 BASIC20.68■□□□□ 0.9
PRAMEF25A6NGN4 RNF39-202ENST00000376751 1970 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PRAMEF25A6NGN4 WDR86-201ENST00000334493 2023 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
PRAMEF25A6NGN4 DMPK-220ENST00000618091 2503 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PRAMEF25A6NGN4 IER2-201ENST00000292433 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRAMEF25A6NGN4 POLR2J2-202ENST00000358438 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRAMEF25A6NGN4 ZDHHC16-203ENST00000353979 1647 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PRAMEF25A6NGN4 HNRNPD-202ENST00000352301 1667 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRAMEF25A6NGN4 WWC2-AS2-201ENST00000578387 2183 ntBASIC20.68■□□□□ 0.9
PRAMEF25A6NGN4 TMEM218-209ENST00000529583 848 ntAPPRIS P1 TSL 3 BASIC20.68■□□□□ 0.9
PRAMEF25A6NGN4 PABPN1-207ENST00000556821 1220 ntTSL 2 BASIC20.68■□□□□ 0.9
PRAMEF25A6NGN4 MIR4466-201ENST00000606121 54 ntBASIC20.68■□□□□ 0.9
PRAMEF25A6NGN4 SLC25A11-201ENST00000225665 1897 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRAMEF25A6NGN4 HAR1A-201ENST00000433161 1882 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PRAMEF25A6NGN4 PDE5A-201ENST00000264805 3020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRAMEF25A6NGN4 TSPAN17-207ENST00000508164 2457 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PRAMEF25A6NGN4 ZFP69B-204ENST00000484445 1976 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
PRAMEF25A6NGN4 ESRRAP2-201ENST00000418437 1549 ntBASIC20.68■□□□□ 0.9
PRAMEF25A6NGN4 CLN6-201ENST00000249806 2243 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
PRAMEF25A6NGN4 ADAD2-201ENST00000268624 2283 ntAPPRIS P3 TSL 2 BASIC20.67■□□□□ 0.9
PRAMEF25A6NGN4 CACNG2-201ENST00000300105 2384 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRAMEF25A6NGN4 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PRAMEF25A6NGN4 CBWD1-203ENST00000377400 1792 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRAMEF25A6NGN4 AC127496.7-201ENST00000625110 1798 ntBASIC20.67■□□□□ 0.9
PRAMEF25A6NGN4 ASPSCR1-202ENST00000306739 1843 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRAMEF25A6NGN4 AC242852.2-201ENST00000615738 1807 ntBASIC20.67■□□□□ 0.9
PRAMEF25A6NGN4 VSX1-205ENST00000429762 1977 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PRAMEF25A6NGN4 TMEM159-201ENST00000233047 2014 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRAMEF25A6NGN4 NPAS1-202ENST00000449844 2043 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRAMEF25A6NGN4 SURF2-201ENST00000371964 842 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRAMEF25A6NGN4 AC019163.1-201ENST00000512634 610 ntTSL 2 BASIC20.67■□□□□ 0.9
PRAMEF25A6NGN4 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
PRAMEF25A6NGN4 AL445237.1-202ENST00000604581 425 ntTSL 5 BASIC20.67■□□□□ 0.9
PRAMEF25A6NGN4 Z98883.1-202ENST00000635107 1289 ntTSL 5 BASIC20.67■□□□□ 0.9
PRAMEF25A6NGN4 EFCAB1-202ENST00000433756 2286 ntTSL 2 BASIC20.67■□□□□ 0.9
PRAMEF25A6NGN4 NOTUM-201ENST00000409678 2329 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRAMEF25A6NGN4 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRAMEF25A6NGN4 MYB-221ENST00000527615 2381 ntTSL 5 BASIC20.67■□□□□ 0.9
PRAMEF25A6NGN4 SLC29A1-207ENST00000393841 2485 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
PRAMEF25A6NGN4 SNUPN-207ENST00000567134 1641 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
PRAMEF25A6NGN4 SH3YL1-201ENST00000356150 1763 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
PRAMEF25A6NGN4 POLR2J3-220ENST00000613744 2096 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRAMEF25A6NGN4 CDKN2B-202ENST00000380142 859 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PRAMEF25A6NGN4 BAD-203ENST00000394532 1157 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRAMEF25A6NGN4 AL136116.3-201ENST00000402907 1138 ntBASIC20.66■□□□□ 0.9
PRAMEF25A6NGN4 RCE1-202ENST00000524506 1379 ntTSL 5 BASIC20.66■□□□□ 0.9
PRAMEF25A6NGN4 ODF3L2-201ENST00000315489 1604 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRAMEF25A6NGN4 SOAT2-201ENST00000301466 2044 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRAMEF25A6NGN4 SLC35A3-204ENST00000427993 2062 ntAPPRIS P1 TSL 5 BASIC20.66■□□□□ 0.9
PRAMEF25A6NGN4 SPHK1-201ENST00000323374 2138 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PRAMEF25A6NGN4 PLPP5-209ENST00000529359 2185 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
PRAMEF25A6NGN4 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
PRAMEF25A6NGN4 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
PRAMEF25A6NGN4 IQSEC3-201ENST00000382841 2701 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
PRAMEF25A6NGN4 BIN1-209ENST00000393040 2293 ntAPPRIS ALT2 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRAMEF25A6NGN4 PNRC1-201ENST00000336032 2065 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRAMEF25A6NGN4 SRD5A1P1-201ENST00000442297 786 ntBASIC20.65■□□□□ 0.9
PRAMEF25A6NGN4 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.65■□□□□ 0.9
PRAMEF25A6NGN4 RASSF5-202ENST00000579436 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
PRAMEF25A6NGN4 CREB1-205ENST00000430624 2005 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
PRAMEF25A6NGN4 AKT2-234ENST00000579047 2029 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PRAMEF25A6NGN4 TULP1-202ENST00000322263 1941 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
PRAMEF25A6NGN4 SLC35C1-202ENST00000442528 1756 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PRAMEF25A6NGN4 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PRAMEF25A6NGN4 PTPN13-205ENST00000502971 1708 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PRAMEF25A6NGN4 WRAP73-201ENST00000270708 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PRAMEF25A6NGN4 TGIF1-206ENST00000405385 1689 ntTSL 2 BASIC20.64■□□□□ 0.9
PRAMEF25A6NGN4 UBAP1L-203ENST00000559089 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
PRAMEF25A6NGN4 SNRNP70-201ENST00000221448 1603 ntTSL 2 BASIC20.64■□□□□ 0.9
PRAMEF25A6NGN4 HSD11B1L-203ENST00000342970 1620 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
PRAMEF25A6NGN4 ANO1-202ENST00000355303 4790 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.9
PRAMEF25A6NGN4 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
PRAMEF25A6NGN4 STX5-201ENST00000294179 1794 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 18.6 ms