Protein–RNA interactions for Protein: Q96S21

RAB40C, Ras-related protein Rab-40C, humanhuman

Predictions only

Length 281 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40CQ96S21 OSTM1-AS1-202ENST00000441184 3334 ntTSL 1 (best) BASIC10.83□□□□□ -0.68
RAB40CQ96S21 SNAP91-212ENST00000520302 4136 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
RAB40CQ96S21 KCTD7-209ENST00000640385 4118 ntTSL 5 BASIC10.82□□□□□ -0.68
RAB40CQ96S21 BDNF-202ENST00000356660 4018 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RAB40CQ96S21 VAT1L-201ENST00000302536 3825 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RAB40CQ96S21 LEPR-201ENST00000344610 2935 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
RAB40CQ96S21 CSF3R-201ENST00000331941 2375 ntTSL 5 BASIC10.82□□□□□ -0.68
RAB40CQ96S21 CICP19-201ENST00000632944 2357 ntBASIC10.82□□□□□ -0.68
RAB40CQ96S21 AC099489.1-203ENST00000598234 10568 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
RAB40CQ96S21 EVA1A-201ENST00000233712 1815 ntAPPRIS P2 TSL 2 BASIC10.82□□□□□ -0.68
RAB40CQ96S21 AREL1-201ENST00000356357 5456 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RAB40CQ96S21 RUSC1-AS1-202ENST00000446880 1836 ntTSL 2 BASIC10.82□□□□□ -0.68
RAB40CQ96S21 KCNV1-202ENST00000524391 6979 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RAB40CQ96S21 ABCF2-201ENST00000222388 2185 ntTSL 5 BASIC10.82□□□□□ -0.68
RAB40CQ96S21 PLEKHG5-202ENST00000377725 3475 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
RAB40CQ96S21 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
RAB40CQ96S21 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
RAB40CQ96S21 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
RAB40CQ96S21 TPRKB-202ENST00000318190 819 ntTSL 5 BASIC10.82□□□□□ -0.68
RAB40CQ96S21 SH3BGR-201ENST00000333634 1251 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
RAB40CQ96S21 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
RAB40CQ96S21 RPP25L-202ENST00000378959 888 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RAB40CQ96S21 SMARCB1-203ENST00000407082 1182 ntTSL 5 BASIC10.82□□□□□ -0.68
RAB40CQ96S21 AL365277.1-206ENST00000417869 487 ntTSL 3 BASIC10.82□□□□□ -0.68
RAB40CQ96S21 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC10.82□□□□□ -0.68
RAB40CQ96S21 DRGX-202ENST00000434016 955 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
RAB40CQ96S21 BX276092.5-201ENST00000439926 886 ntTSL 5 BASIC10.82□□□□□ -0.68
RAB40CQ96S21 AL356489.1-201ENST00000449144 1144 ntTSL 3 BASIC10.82□□□□□ -0.68
RAB40CQ96S21 AL365277.1-204ENST00000450157 599 ntTSL 3 BASIC10.82□□□□□ -0.68
RAB40CQ96S21 BUD31-205ENST00000456893 512 ntTSL 5 BASIC10.82□□□□□ -0.68
RAB40CQ96S21 AL365277.1-203ENST00000458207 693 ntTSL 3 BASIC10.82□□□□□ -0.68
RAB40CQ96S21 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC10.82□□□□□ -0.68
RAB40CQ96S21 LINC02046-201ENST00000469812 378 ntTSL 3 BASIC10.82□□□□□ -0.68
RAB40CQ96S21 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC10.82□□□□□ -0.68
RAB40CQ96S21 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC10.82□□□□□ -0.68
RAB40CQ96S21 NAA38-204ENST00000575208 529 ntTSL 3 BASIC10.82□□□□□ -0.68
RAB40CQ96S21 AL031673.1-201ENST00000611460 466 ntBASIC10.82□□□□□ -0.68
RAB40CQ96S21 LVRN-202ENST00000395528 4544 ntTSL 5 BASIC10.82□□□□□ -0.68
RAB40CQ96S21 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
RAB40CQ96S21 ALDOA-204ENST00000412304 1603 ntAPPRIS P2 TSL 1 (best) BASIC10.82□□□□□ -0.68
RAB40CQ96S21 SARS2-205ENST00000594171 1631 ntTSL 2 BASIC10.82□□□□□ -0.68
RAB40CQ96S21 DFFB-205ENST00000378209 3028 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RAB40CQ96S21 RAB6A-201ENST00000310653 3389 ntAPPRIS P5 TSL 1 (best) BASIC10.82□□□□□ -0.68
RAB40CQ96S21 CACNB1-212ENST00000622445 3722 ntTSL 5 BASIC10.82□□□□□ -0.68
RAB40CQ96S21 KRT78-202ENST00000359499 2554 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
RAB40CQ96S21 HSPA4-204ENST00000615899 2204 ntTSL 5 BASIC10.82□□□□□ -0.68
RAB40CQ96S21 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RAB40CQ96S21 PKM-222ENST00000568883 1863 ntTSL 5 BASIC10.82□□□□□ -0.68
RAB40CQ96S21 AC091807.1-201ENST00000418838 1544 ntBASIC10.82□□□□□ -0.68
RAB40CQ96S21 DNAJB5-204ENST00000454002 2818 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
RAB40CQ96S21 RBM33-203ENST00000341148 7058 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
RAB40CQ96S21 VAMP1-201ENST00000361716 3449 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
RAB40CQ96S21 TBC1D3I-203ENST00000621034 1790 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RAB40CQ96S21 ITGA2B-201ENST00000262407 3333 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RAB40CQ96S21 SOCS2-AS1-201ENST00000499137 3325 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
RAB40CQ96S21 TRHDE-AS1-202ENST00000435350 2966 ntTSL 2 BASIC10.82□□□□□ -0.68
RAB40CQ96S21 MBNL1-AS1-202ENST00000608395 6585 ntTSL 2 BASIC10.82□□□□□ -0.68
RAB40CQ96S21 SLC5A11-205ENST00000545376 2294 ntTSL 2 BASIC10.82□□□□□ -0.68
RAB40CQ96S21 PSMD11-201ENST00000261712 4098 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RAB40CQ96S21 PID1-203ENST00000392055 2533 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
RAB40CQ96S21 ARRDC3-AS1-201ENST00000625713 2500 ntTSL 2 BASIC10.82□□□□□ -0.68
RAB40CQ96S21 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RAB40CQ96S21 ABAT-201ENST00000268251 4836 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RAB40CQ96S21 BMP2-201ENST00000378827 3601 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
RAB40CQ96S21 IYD-208ENST00000500320 2158 ntTSL 2 BASIC10.82□□□□□ -0.68
RAB40CQ96S21 TMEM136-202ENST00000375095 4143 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
RAB40CQ96S21 PDXDC1-218ENST00000627450 2683 ntTSL 2 BASIC10.81□□□□□ -0.68
RAB40CQ96S21 ELN-201ENST00000252034 3781 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
RAB40CQ96S21 GADL1-201ENST00000282538 3759 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
RAB40CQ96S21 RAP1A-202ENST00000369709 5024 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RAB40CQ96S21 EDARADD-204ENST00000637660 2803 ntTSL 5 BASIC10.81□□□□□ -0.68
RAB40CQ96S21 GPATCH2L-212ENST00000557263 1458 ntTSL 2 BASIC10.81□□□□□ -0.68
RAB40CQ96S21 EDARADD-202ENST00000359362 3097 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RAB40CQ96S21 SCML1-201ENST00000380041 1997 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
RAB40CQ96S21 AC023355.1-202ENST00000612262 4242 ntTSL 5 BASIC10.81□□□□□ -0.68
RAB40CQ96S21 SIN3A-202ENST00000394947 6737 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RAB40CQ96S21 DCAF4-203ENST00000394234 2360 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
RAB40CQ96S21 PCDHGB8P-202ENST00000507007 2873 ntBASIC10.81□□□□□ -0.68
RAB40CQ96S21 CACNB3-204ENST00000547230 2395 ntTSL 3 BASIC10.81□□□□□ -0.68
RAB40CQ96S21 AC002550.1-201ENST00000565916 1379 ntTSL 5 BASIC10.81□□□□□ -0.68
RAB40CQ96S21 HYOU1-221ENST00000621959 3358 ntTSL 2 BASIC10.81□□□□□ -0.68
RAB40CQ96S21 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC10.81□□□□□ -0.68
RAB40CQ96S21 CAPN10-AS1-201ENST00000567819 4000 ntBASIC10.81□□□□□ -0.68
RAB40CQ96S21 RETREG3-201ENST00000309428 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RAB40CQ96S21 NTRK3-204ENST00000360948 3004 ntTSL 5 BASIC10.81□□□□□ -0.68
RAB40CQ96S21 MADD-204ENST00000395336 5942 ntAPPRIS ALT2 TSL 1 (best) BASIC10.81□□□□□ -0.68
RAB40CQ96S21 MSH6-213ENST00000614496 4150 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
RAB40CQ96S21 ZDHHC7-201ENST00000313732 3442 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RAB40CQ96S21 KCNH1-202ENST00000367007 3445 ntTSL 5 BASIC10.81□□□□□ -0.68
RAB40CQ96S21 CTSV-201ENST00000259470 1546 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RAB40CQ96S21 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RAB40CQ96S21 MRPL34-201ENST00000252602 968 ntAPPRIS P2 TSL 1 (best) BASIC10.81□□□□□ -0.68
RAB40CQ96S21 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
RAB40CQ96S21 AGER-203ENST00000375065 665 ntTSL 2 BASIC10.81□□□□□ -0.68
RAB40CQ96S21 APOC3-202ENST00000375345 604 ntTSL 5 BASIC10.81□□□□□ -0.68
RAB40CQ96S21 NCR3-202ENST00000376071 541 ntTSL 5 BASIC10.81□□□□□ -0.68
RAB40CQ96S21 IGHV3-7-201ENST00000390598 430 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
RAB40CQ96S21 DKKL1P1-201ENST00000400550 698 ntBASIC10.81□□□□□ -0.68
RAB40CQ96S21 HSPB7-203ENST00000406363 648 ntAPPRIS ALT1 TSL 1 (best) BASIC10.81□□□□□ -0.68
RAB40CQ96S21 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC10.81□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms