RNA–Protein interactions for RNA: ENST00000359499.8

KRT78-202, Transcript of keratin 78, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene KRT78, Length 2,554 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT78-202ENST00000359499 NISCHQ9Y2I1 1504 aa26.38■■□□□ 1.81
KRT78-202ENST00000359499 CCDC180Q9P1Z9 1646 aa22.53■■□□□ 1.2
KRT78-202ENST00000359499 SHROOM4Q9ULL8 1493 aa22.48■■□□□ 1.19
KRT78-202ENST00000359499 DCAF8L2P0C7V8 631 aa22.34■■□□□ 1.17
KRT78-202ENST00000359499 ZCCHC6Q5VYS8 1495 aaKnown RBP22.2■■□□□ 1.14
KRT78-202ENST00000359499 PELP1Q8IZL8 1130 aaKnown RBP22.01■■□□□ 1.11
KRT78-202ENST00000359499 SUPT5HO00267 1087 aaKnown RBP21.79■■□□□ 1.08
KRT78-202ENST00000359499 MYT1Q01538 1121 aa21.64■■□□□ 1.05
KRT78-202ENST00000359499 ABCC9O60706 1549 aa21.55■■□□□ 1.04
KRT78-202ENST00000359499 DCAF1Q9Y4B6 1507 aa21.48■■□□□ 1.03
KRT78-202ENST00000359499 SCRIBQ14160 1630 aa21.29■■□□□ 1
KRT78-202ENST00000359499 MYO15BQ96JP2 1530 aa21.22■□□□□ 0.99
KRT78-202ENST00000359499 CHIC1Q5VXU3 224 aa21.21■□□□□ 0.99
KRT78-202ENST00000359499 HRCP23327 699 aa21.17■□□□□ 0.98
KRT78-202ENST00000359499 PCGF6Q9BYE7 350 aa20.97■□□□□ 0.95
KRT78-202ENST00000359499 NACADO15069 1562 aa20.96■□□□□ 0.95
KRT78-202ENST00000359499 TTBK1Q5TCY1 1321 aaPredicted RBP20.77■□□□□ 0.92
KRT78-202ENST00000359499 RB1CC1Q8TDY2 1594 aa20.77■□□□□ 0.92
KRT78-202ENST00000359499 PPARGC1BQ86YN6 1023 aaKnown RBP20.77■□□□□ 0.91
KRT78-202ENST00000359499 RSF1Q96T23 1441 aaPredicted RBP20.75■□□□□ 0.91
KRT78-202ENST00000359499 CECR2Q9BXF3 1484 aa20.74■□□□□ 0.91
KRT78-202ENST00000359499 LOC105371045A0A1W2PR82 267 aa20.67■□□□□ 0.9
KRT78-202ENST00000359499 PABPN1Q86U42 306 aaKnown RBP eCLIP20.59■□□□□ 0.89
KRT78-202ENST00000359499 MROH2BQ7Z745 1585 aa20.58■□□□□ 0.88
KRT78-202ENST00000359499 UNC13AQ9UPW8 1703 aa20.55■□□□□ 0.88
KRT78-202ENST00000359499 WIZO95785 1651 aa20.47■□□□□ 0.87
KRT78-202ENST00000359499 TRIM26Q12899 539 aaPredicted RBP20.42■□□□□ 0.86
KRT78-202ENST00000359499 BICRAQ9NZM4 1560 aa20.29■□□□□ 0.84
KRT78-202ENST00000359499 BAZ1AQ9NRL2 1556 aaPredicted RBP20.27■□□□□ 0.83
KRT78-202ENST00000359499 PRKCSHP14314 528 aaPredicted RBP20.24■□□□□ 0.83
KRT78-202ENST00000359499 FAM9AQ8IZU1 332 aaPredicted RBP20.21■□□□□ 0.83
KRT78-202ENST00000359499 TRIM41Q8WV44 630 aa20.21■□□□□ 0.83
KRT78-202ENST00000359499 SMARCA4P51532 1647 aa20.2■□□□□ 0.82
KRT78-202ENST00000359499 EHMT2Q96KQ7 1210 aa20.2■□□□□ 0.82
KRT78-202ENST00000359499 SCAF1Q9H7N4 1312 aaKnown RBP20.15■□□□□ 0.82
KRT78-202ENST00000359499 ZEB1P37275 1124 aaPredicted RBP20.09■□□□□ 0.81
KRT78-202ENST00000359499 TOP2AP11388 1531 aaKnown RBP20.01■□□□□ 0.79
KRT78-202ENST00000359499 CCDC88BA6NC98 1476 aa20.01■□□□□ 0.79
KRT78-202ENST00000359499 SMARCA2P51531 1590 aa19.94■□□□□ 0.78
KRT78-202ENST00000359499 ABCC8Q09428 1581 aa19.9■□□□□ 0.78
KRT78-202ENST00000359499 BCL11AQ9H165 835 aa19.89■□□□□ 0.77
KRT78-202ENST00000359499 EIF4G1Q04637 1599 aaKnown RBP19.86■□□□□ 0.77
KRT78-202ENST00000359499 ERICH6Q7L0X2 663 aa19.84■□□□□ 0.77
KRT78-202ENST00000359499 ATAD2BQ9ULI0 1458 aa19.8■□□□□ 0.76
KRT78-202ENST00000359499 APLP2Q06481 763 aa19.75■□□□□ 0.75
KRT78-202ENST00000359499 BAZ1BQ9UIG0 1483 aaKnown RBP19.74■□□□□ 0.75
KRT78-202ENST00000359499 PEG3Q9GZU2 1588 aa19.72■□□□□ 0.75
KRT78-202ENST00000359499 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.6■□□□□ 0.73
KRT78-202ENST00000359499 SOGA1O94964 1423 aa19.6■□□□□ 0.73
KRT78-202ENST00000359499 RUSC2Q8N2Y8 1516 aa19.57■□□□□ 0.72
KRT78-202ENST00000359499 CCER1Q8TC90 406 aaPredicted RBP19.55■□□□□ 0.72
KRT78-202ENST00000359499 WRNQ14191 1432 aaPredicted RBP eCLIP19.5■□□□□ 0.71
KRT78-202ENST00000359499 SYNJ1O43426 1573 aa19.46■□□□□ 0.71
KRT78-202ENST00000359499 ACIN1Q9UKV3 1341 aaKnown RBP19.43■□□□□ 0.7
KRT78-202ENST00000359499 NCAPD3P42695 1498 aa19.43■□□□□ 0.7
KRT78-202ENST00000359499 NEUROD1Q13562 356 aa19.4■□□□□ 0.7
KRT78-202ENST00000359499 CENPBP07199 599 aaPredicted RBP19.4■□□□□ 0.7
KRT78-202ENST00000359499 SLC24A1O60721 1099 aa19.39■□□□□ 0.69
KRT78-202ENST00000359499 CSRNP3Q8WYN3 585 aa19.38■□□□□ 0.69
KRT78-202ENST00000359499 UBTFP17480 764 aaKnown RBP19.37■□□□□ 0.69
KRT78-202ENST00000359499 HMGXB3Q12766 1538 aa19.36■□□□□ 0.69
KRT78-202ENST00000359499 DIEXFQ68CQ4 756 aaKnown RBP19.35■□□□□ 0.69
KRT78-202ENST00000359499 CC2D2AQ9P2K1 1620 aa19.31■□□□□ 0.68
KRT78-202ENST00000359499 RANGAP1P46060 587 aaPredicted RBP19.31■□□□□ 0.68
KRT78-202ENST00000359499 CEP162Q5TB80 1403 aa19.27■□□□□ 0.67
KRT78-202ENST00000359499 GTF3C3Q9Y5Q9 886 aa19.25■□□□□ 0.67
KRT78-202ENST00000359499 DNAJC5BQ9UF47 199 aa19.2■□□□□ 0.66
KRT78-202ENST00000359499 TNIKQ9UKE5 1360 aa19.19■□□□□ 0.66
KRT78-202ENST00000359499 CFTRP13569 1480 aa19.18■□□□□ 0.66
KRT78-202ENST00000359499 TOP2BQ02880 1626 aa19.17■□□□□ 0.66
KRT78-202ENST00000359499 EEA1Q15075 1411 aa19.17■□□□□ 0.66
KRT78-202ENST00000359499 CUX1P39880 1505 aa19.17■□□□□ 0.66
KRT78-202ENST00000359499 GOLGA3Q08378 1498 aa19.14■□□□□ 0.65
KRT78-202ENST00000359499 RAPGEF2Q9Y4G8 1499 aa19.11■□□□□ 0.65
KRT78-202ENST00000359499 ZNF316A6NFI3 1004 aaPredicted RBP19.11■□□□□ 0.65
KRT78-202ENST00000359499 BIVM-ERCC5R4GMW8 1640 aa19.09■□□□□ 0.65
KRT78-202ENST00000359499 CADPSQ9ULU8 1353 aa19.09■□□□□ 0.65
KRT78-202ENST00000359499 NESP48681 1621 aa19.07■□□□□ 0.64
KRT78-202ENST00000359499 CEP164Q9UPV0 1460 aa19.06■□□□□ 0.64
KRT78-202ENST00000359499 KIF21BO75037 1637 aa19■□□□□ 0.63
KRT78-202ENST00000359499 YTHDC1Q96MU7 727 aaKnown RBP18.98■□□□□ 0.63
KRT78-202ENST00000359499 ANP32EQ9BTT0 268 aa18.97■□□□□ 0.63
KRT78-202ENST00000359499 HNRNPUL2Q1KMD3 747 aaKnown RBP18.96■□□□□ 0.63
KRT78-202ENST00000359499 CLIP1P30622 1438 aa18.96■□□□□ 0.63
KRT78-202ENST00000359499 PRDM2Q13029 1718 aa18.95■□□□□ 0.62
KRT78-202ENST00000359499 FANCD2Q9BXW9 1451 aa18.94■□□□□ 0.62
KRT78-202ENST00000359499 MIER1Q8N108 512 aa18.91■□□□□ 0.62
KRT78-202ENST00000359499 KIF27Q86VH2 1401 aa18.91■□□□□ 0.62
KRT78-202ENST00000359499 CUX2O14529 1486 aa18.91■□□□□ 0.62
KRT78-202ENST00000359499 FGD5Q6ZNL6 1462 aa18.91■□□□□ 0.62
KRT78-202ENST00000359499 PRXQ9BXM0 1461 aa18.86■□□□□ 0.61
KRT78-202ENST00000359499 RAD54L2Q9Y4B4 1467 aa18.85■□□□□ 0.61
KRT78-202ENST00000359499 IGF1RP08069 1367 aa18.79■□□□□ 0.6
KRT78-202ENST00000359499 VPS8Q8N3P4 1428 aa18.78■□□□□ 0.6
KRT78-202ENST00000359499 TOPBP1Q92547 1522 aa18.75■□□□□ 0.59
KRT78-202ENST00000359499 ERICH3Q5RHP9 1530 aa18.75■□□□□ 0.59
KRT78-202ENST00000359499 POLA1P09884 1462 aaPredicted RBP18.73■□□□□ 0.59
KRT78-202ENST00000359499 DAXXQ9UER7 740 aaPredicted RBP18.73■□□□□ 0.59
KRT78-202ENST00000359499 CARMIL1Q5VZK9 1371 aa18.71■□□□□ 0.59
KRT78-202ENST00000359499 ARAP1Q96P48 1450 aa18.71■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms