Protein–RNA interactions for Protein: P48730

CSNK1D, Casein kinase I isoform delta, humanhuman

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1DP48730 UBE3A-209ENST00000625778 3217 ntTSL 5 BASIC13.25□□□□□ -0.29
CSNK1DP48730 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC13.25□□□□□ -0.29
CSNK1DP48730 ZFYVE19-209ENST00000564258 2059 ntTSL 2 BASIC13.25□□□□□ -0.29
CSNK1DP48730 NADK-202ENST00000341991 3098 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CSNK1DP48730 ZNF721-205ENST00000511833 2966 ntAPPRIS P1 TSL 4 BASIC13.25□□□□□ -0.29
CSNK1DP48730 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CSNK1DP48730 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC13.25□□□□□ -0.29
CSNK1DP48730 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC13.25□□□□□ -0.29
CSNK1DP48730 TGFBR3-204ENST00000465892 2908 ntAPPRIS ALT1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CSNK1DP48730 ZMYND10-201ENST00000231749 2896 ntAPPRIS P3 TSL 1 (best) BASIC13.25□□□□□ -0.29
CSNK1DP48730 SNX19-201ENST00000265909 6535 ntAPPRIS P1 TSL 1 (best) BASIC13.25□□□□□ -0.29
CSNK1DP48730 CHMP7-201ENST00000313219 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CSNK1DP48730 SCN8A-215ENST00000638820 3359 ntTSL 5 BASIC13.24□□□□□ -0.29
CSNK1DP48730 XYLB-203ENST00000427323 1666 ntTSL 2 BASIC13.24□□□□□ -0.29
CSNK1DP48730 ARAP1-201ENST00000334211 4942 ntAPPRIS P3 TSL 1 (best) BASIC13.24□□□□□ -0.29
CSNK1DP48730 AC008806.1-201ENST00000624962 2443 ntBASIC13.24□□□□□ -0.29
CSNK1DP48730 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CSNK1DP48730 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CSNK1DP48730 ELAVL1-201ENST00000407627 6015 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CSNK1DP48730 HPS1-215ENST00000613394 3714 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CSNK1DP48730 VPS52-212ENST00000445902 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CSNK1DP48730 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CSNK1DP48730 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CSNK1DP48730 MLLT10-201ENST00000307729 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CSNK1DP48730 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC13.24□□□□□ -0.29
CSNK1DP48730 AC125611.4-201ENST00000553259 4166 ntTSL 2 BASIC13.24□□□□□ -0.29
CSNK1DP48730 ANKRA2-201ENST00000296785 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CSNK1DP48730 FAM189A2-202ENST00000303068 2051 ntTSL 2 BASIC13.24□□□□□ -0.29
CSNK1DP48730 LINC01801-202ENST00000590963 2077 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CSNK1DP48730 YAP1P1-201ENST00000401504 1393 ntBASIC13.24□□□□□ -0.29
CSNK1DP48730 MPZL3-204ENST00000527472 1381 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CSNK1DP48730 AC090403.1-201ENST00000584546 1352 ntTSL 2 BASIC13.24□□□□□ -0.29
CSNK1DP48730 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CSNK1DP48730 STIM1-201ENST00000300737 4038 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CSNK1DP48730 CYB5A-202ENST00000340533 3283 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CSNK1DP48730 AP1B1-201ENST00000317368 3903 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CSNK1DP48730 AXL-202ENST00000359092 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CSNK1DP48730 AIG1-203ENST00000367596 559 ntTSL 2 BASIC13.24□□□□□ -0.29
CSNK1DP48730 ALKBH2-202ENST00000429722 1159 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CSNK1DP48730 GNAT1-202ENST00000433068 1224 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CSNK1DP48730 NME6-208ENST00000435684 599 ntTSL 2 BASIC13.24□□□□□ -0.29
CSNK1DP48730 COL18A1-AS2-201ENST00000446475 552 ntTSL 4 BASIC13.24□□□□□ -0.29
CSNK1DP48730 PARP8-206ENST00000503665 572 ntTSL 4 BASIC13.24□□□□□ -0.29
CSNK1DP48730 PTK2-225ENST00000520892 571 ntTSL 4 BASIC13.24□□□□□ -0.29
CSNK1DP48730 TMEM241-208ENST00000542162 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC13.24□□□□□ -0.29
CSNK1DP48730 AC009163.5-202ENST00000571737 466 ntTSL 3 BASIC13.24□□□□□ -0.29
CSNK1DP48730 MIR4763-201ENST00000581461 92 ntBASIC13.24□□□□□ -0.29
CSNK1DP48730 MXRA7-204ENST00000585519 540 ntAPPRIS ALT2 TSL 5 BASIC13.24□□□□□ -0.29
CSNK1DP48730 USE1-207ENST00000596136 637 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CSNK1DP48730 IRF3-213ENST00000596765 710 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CSNK1DP48730 ZNF586-204ENST00000598183 603 ntTSL 5 BASIC13.24□□□□□ -0.29
CSNK1DP48730 NRSN2-205ENST00000608467 504 ntTSL 5 BASIC13.24□□□□□ -0.29
CSNK1DP48730 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CSNK1DP48730 LINC01257-201ENST00000376678 2473 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CSNK1DP48730 MDM1-204ENST00000411698 2472 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
CSNK1DP48730 HS6ST3-201ENST00000376705 7804 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CSNK1DP48730 FAM219A-201ENST00000297620 3588 ntAPPRIS P3 TSL 2 BASIC13.24□□□□□ -0.29
CSNK1DP48730 AC027612.1-201ENST00000445234 2395 ntBASIC13.24□□□□□ -0.29
CSNK1DP48730 SP140L-205ENST00000458341 1727 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CSNK1DP48730 ZWILCH-203ENST00000535141 2206 ntTSL 2 BASIC13.24□□□□□ -0.29
CSNK1DP48730 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC13.24□□□□□ -0.29
CSNK1DP48730 ZYX-203ENST00000392910 2123 ntAPPRIS ALT2 TSL 2 BASIC13.24□□□□□ -0.29
CSNK1DP48730 AGAP12P-202ENST00000603888 2141 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CSNK1DP48730 SLC4A7-207ENST00000437179 3667 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CSNK1DP48730 WASHC5-202ENST00000517845 3667 ntTSL 2 BASIC13.24□□□□□ -0.29
CSNK1DP48730 GLI2-210ENST00000452319 6799 ntAPPRIS P1 TSL 5 BASIC13.24□□□□□ -0.29
CSNK1DP48730 GOSR2-233ENST00000640068 3103 ntTSL 5 BASIC13.24□□□□□ -0.29
CSNK1DP48730 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC13.24□□□□□ -0.29
CSNK1DP48730 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC13.24□□□□□ -0.29
CSNK1DP48730 TTC39A-204ENST00000371750 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CSNK1DP48730 PLXNA4-203ENST00000378539 2004 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CSNK1DP48730 NUTM2HP-201ENST00000442076 2498 ntBASIC13.23□□□□□ -0.29
CSNK1DP48730 PPP1R32-203ENST00000432063 1472 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CSNK1DP48730 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CSNK1DP48730 C3orf18-206ENST00000449241 2365 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CSNK1DP48730 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CSNK1DP48730 TRIM60-201ENST00000341062 1867 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CSNK1DP48730 MAGEB1-201ENST00000378981 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CSNK1DP48730 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC13.23□□□□□ -0.29
CSNK1DP48730 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CSNK1DP48730 RNF113A-201ENST00000371442 1353 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
CSNK1DP48730 LIMD2-201ENST00000259006 3193 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CSNK1DP48730 ZNF536-201ENST00000355537 4945 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CSNK1DP48730 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC13.23□□□□□ -0.29
CSNK1DP48730 YY1AP1-205ENST00000355499 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
CSNK1DP48730 KCTD6-205ENST00000490264 1759 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
CSNK1DP48730 LPCAT1-201ENST00000283415 3966 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CSNK1DP48730 PCDHA2-202ENST00000520672 3056 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
CSNK1DP48730 AC124319.4-201ENST00000622931 2161 ntBASIC13.23□□□□□ -0.29
CSNK1DP48730 OCRL-202ENST00000371113 5162 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CSNK1DP48730 C3orf56-201ENST00000624688 1740 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
CSNK1DP48730 MRPL55-219ENST00000391867 685 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
CSNK1DP48730 CPSF4L-202ENST00000397671 1275 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
CSNK1DP48730 PRADC1P1-201ENST00000412317 525 ntBASIC13.23□□□□□ -0.29
CSNK1DP48730 CTHRC1-202ENST00000415886 571 ntTSL 2 BASIC13.23□□□□□ -0.29
CSNK1DP48730 KRT19P4-201ENST00000443208 943 ntBASIC13.23□□□□□ -0.29
CSNK1DP48730 RBM14-205ENST00000443702 732 ntTSL 3 BASIC13.23□□□□□ -0.29
CSNK1DP48730 AL137078.1-201ENST00000446280 404 ntTSL 2 BASIC13.23□□□□□ -0.29
CSNK1DP48730 AGPAT5P1-201ENST00000455855 1019 ntBASIC13.23□□□□□ -0.29
CSNK1DP48730 RN7SL684P-201ENST00000465665 294 ntBASIC13.23□□□□□ -0.29
Retrieved 100 of 98,524 protein–RNA pairs in 72 ms