Protein–RNA interactions for Protein: P35523

CLCN1, Chloride channel protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1P35523 NDRG1-222ENST00000522476 1385 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CLCN1P35523 PNPLA6-204ENST00000545201 4502 ntTSL 2 BASIC15.21■□□□□ 0.02
CLCN1P35523 ATP13A2-201ENST00000326735 3840 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
CLCN1P35523 AC093797.1-201ENST00000411847 1789 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CLCN1P35523 ZNF814-215ENST00000614383 2006 ntTSL 5 BASIC15.21■□□□□ 0.02
CLCN1P35523 GRHL3-203ENST00000356046 2804 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
CLCN1P35523 UNC13D-202ENST00000412096 3648 ntTSL 2 BASIC15.21■□□□□ 0.02
CLCN1P35523 RNASE7-201ENST00000298690 1498 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLCN1P35523 FOSB-203ENST00000443841 3346 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
CLCN1P35523 ELN-205ENST00000358929 3967 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
CLCN1P35523 AL590824.1-201ENST00000403828 1349 ntBASIC15.2■□□□□ 0.02
CLCN1P35523 PDIA6-204ENST00000404824 2236 ntTSL 2 BASIC15.2■□□□□ 0.02
CLCN1P35523 CTNNB1-203ENST00000396185 3356 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLCN1P35523 USP10-219ENST00000570191 2717 ntTSL 2 BASIC15.2■□□□□ 0.02
CLCN1P35523 CLU-202ENST00000405140 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLCN1P35523 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC15.2■□□□□ 0.02
CLCN1P35523 CLPB-201ENST00000294053 3240 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLCN1P35523 LINC01070-201ENST00000561786 2829 ntTSL 2 BASIC15.2■□□□□ 0.02
CLCN1P35523 SLCO2A1-208ENST00000493729 1918 ntTSL 5 BASIC15.2■□□□□ 0.02
CLCN1P35523 SUGP1-201ENST00000247001 2423 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLCN1P35523 APOC3-202ENST00000375345 604 ntTSL 5 BASIC15.2■□□□□ 0.02
CLCN1P35523 HNRNPA1P2-207ENST00000432375 960 ntBASIC15.2■□□□□ 0.02
CLCN1P35523 AC114488.1-201ENST00000435872 591 ntTSL 3 BASIC15.2■□□□□ 0.02
CLCN1P35523 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC15.2■□□□□ 0.02
CLCN1P35523 AC005740.2-201ENST00000511085 419 ntBASIC15.2■□□□□ 0.02
CLCN1P35523 PFDN1-207ENST00000524074 395 ntTSL 5 BASIC15.2■□□□□ 0.02
CLCN1P35523 AC013355.1-201ENST00000562625 723 ntBASIC15.2■□□□□ 0.02
CLCN1P35523 ANKDD1A-202ENST00000395720 1518 ntTSL 5 BASIC15.2■□□□□ 0.02
CLCN1P35523 EPHB6-202ENST00000422643 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLCN1P35523 AFG3L2P1-201ENST00000521792 1763 ntBASIC15.2■□□□□ 0.02
CLCN1P35523 PGGHG-203ENST00000409548 3687 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLCN1P35523 EPAS1-201ENST00000263734 5166 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLCN1P35523 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLCN1P35523 EDRF1-201ENST00000337623 4387 ntAPPRIS P3 TSL 5 BASIC15.2■□□□□ 0.02
CLCN1P35523 ZNF552-201ENST00000391701 2352 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
CLCN1P35523 AL450468.2-201ENST00000565955 1889 ntBASIC15.2■□□□□ 0.02
CLCN1P35523 NR2F1-AS1-213ENST00000607797 3380 ntTSL 2 BASIC15.2■□□□□ 0.02
CLCN1P35523 SRPK3-208ENST00000489426 4479 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
CLCN1P35523 SCNN1A-203ENST00000360168 3481 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLCN1P35523 TRMT12-201ENST00000328599 2207 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
CLCN1P35523 PCSK1-202ENST00000508626 2234 ntTSL 2 BASIC15.2■□□□□ 0.02
CLCN1P35523 RHOH-221ENST00000615577 2227 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
CLCN1P35523 RHOH-223ENST00000619474 2230 ntAPPRIS P1 TSL 4 BASIC15.2■□□□□ 0.02
CLCN1P35523 ERLIN1-202ENST00000407654 1453 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLCN1P35523 BTNL8-211ENST00000610640 1488 ntTSL 5 BASIC15.2■□□□□ 0.02
CLCN1P35523 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
CLCN1P35523 FP565324.1-201ENST00000636427 3659 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
CLCN1P35523 TCF3-202ENST00000344749 4289 ntTSL 5 BASIC15.2■□□□□ 0.02
CLCN1P35523 EPB41L1-203ENST00000373941 2652 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
CLCN1P35523 ANKRD30BP2-202ENST00000447861 3260 ntTSL 2 BASIC15.19■□□□□ 0.02
CLCN1P35523 FO681491.1-201ENST00000623586 3260 ntTSL 2 BASIC15.19■□□□□ 0.02
CLCN1P35523 MCM5-202ENST00000382011 2402 ntTSL 2 BASIC15.19■□□□□ 0.02
CLCN1P35523 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLCN1P35523 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CLCN1P35523 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLCN1P35523 PRIMPOL-201ENST00000314970 2289 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLCN1P35523 TRPM2-201ENST00000300481 5627 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLCN1P35523 UGT1A3-201ENST00000482026 2364 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLCN1P35523 NCDN-202ENST00000373243 3683 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLCN1P35523 TMEM174-201ENST00000296776 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLCN1P35523 GZF1-202ENST00000377051 4740 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLCN1P35523 SLC5A11-209ENST00000567758 2246 ntTSL 5 BASIC15.19■□□□□ 0.02
CLCN1P35523 FUT6-203ENST00000524754 2598 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
CLCN1P35523 ZC3H3-201ENST00000262577 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLCN1P35523 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLCN1P35523 PAK1-202ENST00000356341 3737 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLCN1P35523 RAB15-201ENST00000267512 3391 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLCN1P35523 PKM-202ENST00000335181 2318 ntAPPRIS ALT1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLCN1P35523 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLCN1P35523 ATP6V0B-201ENST00000236067 944 ntTSL 2 BASIC15.19■□□□□ 0.02
CLCN1P35523 SSBP1-201ENST00000265304 687 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLCN1P35523 CRABP1-201ENST00000299529 772 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLCN1P35523 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLCN1P35523 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC15.19■□□□□ 0.02
CLCN1P35523 Z82188.2-201ENST00000419128 630 ntTSL 5 BASIC15.19■□□□□ 0.02
CLCN1P35523 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC15.19■□□□□ 0.02
CLCN1P35523 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC15.19■□□□□ 0.02
CLCN1P35523 EIF4HP1-201ENST00000453115 687 ntBASIC15.19■□□□□ 0.02
CLCN1P35523 LINC01248-201ENST00000458264 468 ntTSL 3 BASIC15.19■□□□□ 0.02
CLCN1P35523 DSCR3-207ENST00000476950 937 ntTSL 2 BASIC15.19■□□□□ 0.02
CLCN1P35523 ATP6V0B-211ENST00000498664 825 ntTSL 2 BASIC15.19■□□□□ 0.02
CLCN1P35523 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC15.19■□□□□ 0.02
CLCN1P35523 AC106794.1-201ENST00000506935 792 ntBASIC15.19■□□□□ 0.02
CLCN1P35523 CD164-210ENST00000512821 964 ntTSL 2 BASIC15.19■□□□□ 0.02
CLCN1P35523 GTF2H2-204ENST00000517900 659 ntTSL 5 BASIC15.19■□□□□ 0.02
CLCN1P35523 NPIPP1-202ENST00000534799 1214 ntTSL 3 BASIC15.19■□□□□ 0.02
CLCN1P35523 KRT8P2-201ENST00000556193 944 ntBASIC15.19■□□□□ 0.02
CLCN1P35523 NKG7-204ENST00000595217 816 ntTSL 2 BASIC15.19■□□□□ 0.02
CLCN1P35523 AL008721.1-201ENST00000609964 604 ntBASIC15.19■□□□□ 0.02
CLCN1P35523 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC15.19■□□□□ 0.02
CLCN1P35523 SLC4A1-201ENST00000262418 4965 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLCN1P35523 VPS33B-201ENST00000333371 2767 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLCN1P35523 SLC17A9-202ENST00000370351 3580 ntAPPRIS P3 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLCN1P35523 EDEM3-202ENST00000367512 6678 ntAPPRIS ALT2 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLCN1P35523 SERPING1-203ENST00000378323 1733 ntAPPRIS ALT2 TSL 2 BASIC15.19■□□□□ 0.02
CLCN1P35523 CBX3-203ENST00000409747 1717 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
CLCN1P35523 BRD7P5-201ENST00000299197 1822 ntBASIC15.19■□□□□ 0.02
CLCN1P35523 CCDC178-201ENST00000300227 3087 ntAPPRIS P3 TSL 2 BASIC15.19■□□□□ 0.02
CLCN1P35523 TRMT10B-201ENST00000297994 2281 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
CLCN1P35523 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms