RNA–Protein interactions for RNA: ENST00000524074.1

PFDN1-207, Transcript of prefoldin subunit 1, humanhuman

TSL 5 BASIC

Gene PFDN1, Length 395 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN1-207ENST00000524074 CHIC1Q5VXU3 224 aa30.15■■■□□ 2.42
PFDN1-207ENST00000524074 AEBP2Q6ZN18 517 aaPredicted RBP29.5■■■□□ 2.31
PFDN1-207ENST00000524074 PHF23Q9BUL5 403 aaPredicted RBP26.63■■□□□ 1.85
PFDN1-207ENST00000524074 PLPPR3Q6T4P5 718 aa25.12■■□□□ 1.61
PFDN1-207ENST00000524074 SENP3Q9H4L4 574 aaPredicted RBP24.88■■□□□ 1.57
PFDN1-207ENST00000524074 ADRA2BP18089 450 aa23.43■■□□□ 1.34
PFDN1-207ENST00000524074 EHMT2Q96KQ7 1210 aa23.4■■□□□ 1.34
PFDN1-207ENST00000524074 KCNA4P22459 653 aa23.29■■□□□ 1.32
PFDN1-207ENST00000524074 PPP6R1Q9UPN7 881 aa23.05■■□□□ 1.28
PFDN1-207ENST00000524074 FOXD1Q16676 465 aa22.88■■□□□ 1.25
PFDN1-207ENST00000524074 SLC4A1APQ9BWU0 796 aaKnown RBP22.47■■□□□ 1.19
PFDN1-207ENST00000524074 CSRNP3Q8WYN3 585 aa22.43■■□□□ 1.18
PFDN1-207ENST00000524074 PPP4R3CPQ6ZMV5 832 aa22.29■■□□□ 1.16
PFDN1-207ENST00000524074 NCBP3Q53F19 620 aaKnown RBP22.14■■□□□ 1.13
PFDN1-207ENST00000524074 PIAS4Q8N2W9 510 aaPredicted RBP21.98■■□□□ 1.11
PFDN1-207ENST00000524074 NPM3O75607 178 aaKnown RBP21.77■■□□□ 1.08
PFDN1-207ENST00000524074 ZBTB22O15209 634 aa21.43■■□□□ 1.02
PFDN1-207ENST00000524074 CNKSR2Q8WXI2 1034 aa21.37■■□□□ 1.01
PFDN1-207ENST00000524074 SCAF1Q9H7N4 1312 aaKnown RBP21.22■□□□□ 0.99
PFDN1-207ENST00000524074 FOXD4L1Q9NU39 408 aa21.08■□□□□ 0.97
PFDN1-207ENST00000524074 SLC24A1O60721 1099 aa21.02■□□□□ 0.96
PFDN1-207ENST00000524074 DNAJC5BQ9UF47 199 aa20.87■□□□□ 0.93
PFDN1-207ENST00000524074 AMER1Q5JTC6 1135 aaPredicted RBP20.84■□□□□ 0.93
PFDN1-207ENST00000524074 RTN4Q9NQC3 1192 aaKnown RBP20.79■□□□□ 0.92
PFDN1-207ENST00000524074 MSH5O43196 834 aa20.62■□□□□ 0.89
PFDN1-207ENST00000524074 RNF216Q9NWF9 866 aaPredicted RBP20.61■□□□□ 0.89
PFDN1-207ENST00000524074 MAPK8IP2Q13387 824 aaPredicted RBP20.59■□□□□ 0.89
PFDN1-207ENST00000524074 FKBP8Q14318 412 aa20.25■□□□□ 0.83
PFDN1-207ENST00000524074 ATXN8OSP0DMR3 200 aa20.2■□□□□ 0.82
PFDN1-207ENST00000524074 SLC4A2P04920 1241 aa20.19■□□□□ 0.82
PFDN1-207ENST00000524074 HOXD11P31277 338 aaPredicted RBP20.15■□□□□ 0.82
PFDN1-207ENST00000524074 MYCNP04198 464 aaPredicted RBP20.11■□□□□ 0.81
PFDN1-207ENST00000524074 DMRT2Q9Y5R5 561 aa20.05■□□□□ 0.8
PFDN1-207ENST00000524074 ATF5Q9Y2D1 282 aaPredicted RBP19.42■□□□□ 0.7
PFDN1-207ENST00000524074 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.34■□□□□ 0.69
PFDN1-207ENST00000524074 HNRNPUL2Q1KMD3 747 aaKnown RBP19.34■□□□□ 0.69
PFDN1-207ENST00000524074 SAMD1Q6SPF0 538 aaPredicted RBP19.32■□□□□ 0.68
PFDN1-207ENST00000524074 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.28■□□□□ 0.68
PFDN1-207ENST00000524074 DCAF8L1A6NGE4 600 aa19.21■□□□□ 0.67
PFDN1-207ENST00000524074 FBXO3Q9UK99 471 aa19.18■□□□□ 0.66
PFDN1-207ENST00000524074 PLCB2Q00722 1185 aa19.15■□□□□ 0.66
PFDN1-207ENST00000524074 U3KPZ7 1027 aaPredicted RBP19.07■□□□□ 0.64
PFDN1-207ENST00000524074 ZNF219Q9P2Y4 722 aaPredicted RBP18.99■□□□□ 0.63
PFDN1-207ENST00000524074 SPDYE4A6NLX3 237 aa18.94■□□□□ 0.62
PFDN1-207ENST00000524074 HAP1P54257 671 aaPredicted RBP18.93■□□□□ 0.62
PFDN1-207ENST00000524074 DCAF8L2P0C7V8 631 aa18.86■□□□□ 0.61
PFDN1-207ENST00000524074 VASPP50552 380 aaPredicted RBP18.85■□□□□ 0.61
PFDN1-207ENST00000524074 APLP2Q06481 763 aa18.84■□□□□ 0.61
PFDN1-207ENST00000524074 BCANQ96GW7 911 aa18.79■□□□□ 0.6
PFDN1-207ENST00000524074 PROM2Q8N271 834 aa18.74■□□□□ 0.59
PFDN1-207ENST00000524074 IFNLR1Q8IU57 520 aaPredicted RBP18.66■□□□□ 0.58
PFDN1-207ENST00000524074 MKRN4PQ13434 485 aaPredicted RBP18.65■□□□□ 0.58
PFDN1-207ENST00000524074 VSIG10Q8N0Z9 540 aa18.63■□□□□ 0.57
PFDN1-207ENST00000524074 FBLN2P98095 1184 aa18.61■□□□□ 0.57
PFDN1-207ENST00000524074 PKD2Q13563 968 aa18.56■□□□□ 0.56
PFDN1-207ENST00000524074 PRKCSHP14314 528 aaPredicted RBP18.54■□□□□ 0.56
PFDN1-207ENST00000524074 TAOK2Q9UL54 1235 aa18.53■□□□□ 0.56
PFDN1-207ENST00000524074 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.43■□□□□ 0.54
PFDN1-207ENST00000524074 BBXQ8WY36 941 aaPredicted RBP18.35■□□□□ 0.53
PFDN1-207ENST00000524074 TRHP20396 242 aaPredicted RBP18.29■□□□□ 0.52
PFDN1-207ENST00000524074 POLA2Q14181 598 aa18.27■□□□□ 0.52
PFDN1-207ENST00000524074 KLHL34Q8N239 644 aa18.27■□□□□ 0.52
PFDN1-207ENST00000524074 SPOCK2Q92563 424 aa18.27■□□□□ 0.52
PFDN1-207ENST00000524074 ECM2O94769 699 aaPredicted RBP18.26■□□□□ 0.51
PFDN1-207ENST00000524074 TPRNQ4KMQ1 711 aa18.26■□□□□ 0.51
PFDN1-207ENST00000524074 PAXIP1Q6ZW49 1069 aaPredicted RBP18.26■□□□□ 0.51
PFDN1-207ENST00000524074 KDM2AQ9Y2K7 1162 aa18.25■□□□□ 0.51
PFDN1-207ENST00000524074 CFAP44Q96MT7 982 aa18.22■□□□□ 0.51
PFDN1-207ENST00000524074 NPM1P06748 294 aaKnown RBP eCLIP18.15■□□□□ 0.5
PFDN1-207ENST00000524074 SPINK5Q9NQ38 1064 aaPredicted RBP18.14■□□□□ 0.49
PFDN1-207ENST00000524074 ZBTB12Q9Y330 459 aaPredicted RBP18.11■□□□□ 0.49
PFDN1-207ENST00000524074 CAPN15O75808 1086 aa18.06■□□□□ 0.48
PFDN1-207ENST00000524074 SPRYD3Q8NCJ5 442 aa18.05■□□□□ 0.48
PFDN1-207ENST00000524074 STAG3Q9UJ98 1225 aa18.02■□□□□ 0.48
PFDN1-207ENST00000524074 RGL2O15211 777 aa18■□□□□ 0.47
PFDN1-207ENST00000524074 PLCD3Q8N3E9 789 aa17.98■□□□□ 0.47
PFDN1-207ENST00000524074 TSHZ2Q9NRE2 1034 aa17.96■□□□□ 0.47
PFDN1-207ENST00000524074 ZNF692Q9BU19 519 aaPredicted RBP17.86■□□□□ 0.45
PFDN1-207ENST00000524074 CHGAP10645 457 aaKnown RBP17.84■□□□□ 0.45
PFDN1-207ENST00000524074 MIER1Q8N108 512 aa17.83■□□□□ 0.44
PFDN1-207ENST00000524074 ABCB7O75027 752 aa17.82■□□□□ 0.44
PFDN1-207ENST00000524074 NBR1Q14596 966 aa17.81■□□□□ 0.44
PFDN1-207ENST00000524074 CIZ1Q9ULV3 898 aaPredicted RBP17.78■□□□□ 0.44
PFDN1-207ENST00000524074 RNF39Q9H2S5 420 aa17.76■□□□□ 0.43
PFDN1-207ENST00000524074 SPDYE2BA6NHP3 402 aa17.7■□□□□ 0.42
PFDN1-207ENST00000524074 SPDYE6P0CI01 402 aa17.7■□□□□ 0.42
PFDN1-207ENST00000524074 SPDYE2Q495Y8 402 aa17.7■□□□□ 0.42
PFDN1-207ENST00000524074 PLEKHG5O94827 1062 aa17.69■□□□□ 0.42
PFDN1-207ENST00000524074 ZBTB47Q9UFB7 747 aaPredicted RBP17.69■□□□□ 0.42
PFDN1-207ENST00000524074 DNAJC5Q9H3Z4 198 aa17.68■□□□□ 0.42
PFDN1-207ENST00000524074 SSUH2Q9Y2M2 353 aa17.68■□□□□ 0.42
PFDN1-207ENST00000524074 PABPN1Q86U42 306 aaKnown RBP eCLIP17.66■□□□□ 0.42
PFDN1-207ENST00000524074 C1QBPQ07021 282 aaKnown RBP17.65■□□□□ 0.42
PFDN1-207ENST00000524074 TRIM41Q8WV44 630 aa17.65■□□□□ 0.42
PFDN1-207ENST00000524074 OSCARQ8IYS5 282 aa17.62■□□□□ 0.41
PFDN1-207ENST00000524074 HS6ST3Q8IZP7 471 aa17.61■□□□□ 0.41
PFDN1-207ENST00000524074 TIMELESSQ9UNS1 1208 aa17.44■□□□□ 0.38
PFDN1-207ENST00000524074 TULP1O00294 542 aaPredicted RBP17.42■□□□□ 0.38
PFDN1-207ENST00000524074 GSE1Q14687 1217 aa17.41■□□□□ 0.38
PFDN1-207ENST00000524074 DSG3P32926 999 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 235.4 ms