RNA–Protein interactions for RNA: ENST00000360168.7

SCNN1A-203, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,481 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-203ENST00000360168 NISCHQ9Y2I1 1504 aa23.65■■□□□ 1.38
SCNN1A-203ENST00000360168 SHROOM4Q9ULL8 1493 aa21.42■■□□□ 1.02
SCNN1A-203ENST00000360168 SUPT5HO00267 1087 aaKnown RBP21.2■□□□□ 0.98
SCNN1A-203ENST00000360168 DCAF8L2P0C7V8 631 aa20.76■□□□□ 0.91
SCNN1A-203ENST00000360168 PCGF6Q9BYE7 350 aa20.44■□□□□ 0.86
SCNN1A-203ENST00000360168 CHIC1Q5VXU3 224 aa20.31■□□□□ 0.84
SCNN1A-203ENST00000360168 HRCP23327 699 aa20.29■□□□□ 0.84
SCNN1A-203ENST00000360168 PPARGC1BQ86YN6 1023 aaKnown RBP20.27■□□□□ 0.84
SCNN1A-203ENST00000360168 MYO15BQ96JP2 1530 aa20.26■□□□□ 0.83
SCNN1A-203ENST00000360168 CCDC180Q9P1Z9 1646 aa20.24■□□□□ 0.83
SCNN1A-203ENST00000360168 LOC105371045A0A1W2PR82 267 aa20.1■□□□□ 0.81
SCNN1A-203ENST00000360168 ZCCHC6Q5VYS8 1495 aaKnown RBP19.98■□□□□ 0.79
SCNN1A-203ENST00000360168 EHMT2Q96KQ7 1210 aa19.93■□□□□ 0.78
SCNN1A-203ENST00000360168 FAM9AQ8IZU1 332 aaPredicted RBP19.75■□□□□ 0.75
SCNN1A-203ENST00000360168 TRIM26Q12899 539 aaPredicted RBP19.56■□□□□ 0.72
SCNN1A-203ENST00000360168 ABCC9O60706 1549 aa19.47■□□□□ 0.71
SCNN1A-203ENST00000360168 TRIM41Q8WV44 630 aa19.45■□□□□ 0.7
SCNN1A-203ENST00000360168 DCAF1Q9Y4B6 1507 aa19.43■□□□□ 0.7
SCNN1A-203ENST00000360168 PELP1Q8IZL8 1130 aaKnown RBP19.43■□□□□ 0.7
SCNN1A-203ENST00000360168 TTBK1Q5TCY1 1321 aaPredicted RBP19.31■□□□□ 0.68
SCNN1A-203ENST00000360168 ZEB1P37275 1124 aaPredicted RBP19.14■□□□□ 0.65
SCNN1A-203ENST00000360168 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP19.1■□□□□ 0.65
SCNN1A-203ENST00000360168 SCAF1Q9H7N4 1312 aaKnown RBP19.08■□□□□ 0.64
SCNN1A-203ENST00000360168 SCRIBQ14160 1630 aa19.06■□□□□ 0.64
SCNN1A-203ENST00000360168 RSF1Q96T23 1441 aaPredicted RBP19.03■□□□□ 0.64
SCNN1A-203ENST00000360168 CCER1Q8TC90 406 aaPredicted RBP19.03■□□□□ 0.64
SCNN1A-203ENST00000360168 NACADO15069 1562 aa18.94■□□□□ 0.62
SCNN1A-203ENST00000360168 RB1CC1Q8TDY2 1594 aa18.92■□□□□ 0.62
SCNN1A-203ENST00000360168 MYT1Q01538 1121 aa18.8■□□□□ 0.6
SCNN1A-203ENST00000360168 NEUROD1Q13562 356 aa18.77■□□□□ 0.6
SCNN1A-203ENST00000360168 CECR2Q9BXF3 1484 aa18.76■□□□□ 0.59
SCNN1A-203ENST00000360168 YTHDC1Q96MU7 727 aaKnown RBP18.73■□□□□ 0.59
SCNN1A-203ENST00000360168 DIEXFQ68CQ4 756 aaKnown RBP18.71■□□□□ 0.59
SCNN1A-203ENST00000360168 GTF3C3Q9Y5Q9 886 aa18.69■□□□□ 0.58
SCNN1A-203ENST00000360168 ACIN1Q9UKV3 1341 aaKnown RBP18.68■□□□□ 0.58
SCNN1A-203ENST00000360168 RANGAP1P46060 587 aaPredicted RBP18.65■□□□□ 0.58
SCNN1A-203ENST00000360168 UBTFP17480 764 aaKnown RBP18.64■□□□□ 0.57
SCNN1A-203ENST00000360168 MROH2BQ7Z745 1585 aa18.59■□□□□ 0.57
SCNN1A-203ENST00000360168 CENPBP07199 599 aaPredicted RBP18.58■□□□□ 0.56
SCNN1A-203ENST00000360168 PABPN1Q86U42 306 aaKnown RBP eCLIP18.57■□□□□ 0.56
SCNN1A-203ENST00000360168 HNRNPUL2Q1KMD3 747 aaKnown RBP18.54■□□□□ 0.56
SCNN1A-203ENST00000360168 WIZO95785 1651 aa18.49■□□□□ 0.55
SCNN1A-203ENST00000360168 ABCC8Q09428 1581 aa18.41■□□□□ 0.54
SCNN1A-203ENST00000360168 CCDC88BA6NC98 1476 aa18.37■□□□□ 0.53
SCNN1A-203ENST00000360168 SOGA1O94964 1423 aa18.36■□□□□ 0.53
SCNN1A-203ENST00000360168 CEP162Q5TB80 1403 aa18.36■□□□□ 0.53
SCNN1A-203ENST00000360168 ZNF316A6NFI3 1004 aaPredicted RBP18.35■□□□□ 0.53
SCNN1A-203ENST00000360168 CSRNP3Q8WYN3 585 aa18.32■□□□□ 0.52
SCNN1A-203ENST00000360168 UNC13AQ9UPW8 1703 aa18.31■□□□□ 0.52
SCNN1A-203ENST00000360168 MIER1Q8N108 512 aa18.3■□□□□ 0.52
SCNN1A-203ENST00000360168 RUSC2Q8N2Y8 1516 aa18.26■□□□□ 0.51
SCNN1A-203ENST00000360168 APLP2Q06481 763 aa18.24■□□□□ 0.51
SCNN1A-203ENST00000360168 BICRAQ9NZM4 1560 aa18.2■□□□□ 0.5
SCNN1A-203ENST00000360168 BAZ1AQ9NRL2 1556 aaPredicted RBP18.17■□□□□ 0.5
SCNN1A-203ENST00000360168 TNIKQ9UKE5 1360 aa18.13■□□□□ 0.49
SCNN1A-203ENST00000360168 ITGAEP38570 1179 aa18.08■□□□□ 0.49
SCNN1A-203ENST00000360168 WRNQ14191 1432 aaPredicted RBP eCLIP18.06■□□□□ 0.48
SCNN1A-203ENST00000360168 SMARCA4P51532 1647 aa18.05■□□□□ 0.48
SCNN1A-203ENST00000360168 GOLGA3Q08378 1498 aa17.99■□□□□ 0.47
SCNN1A-203ENST00000360168 TOP2AP11388 1531 aaKnown RBP17.98■□□□□ 0.47
SCNN1A-203ENST00000360168 CLIP1P30622 1438 aa17.97■□□□□ 0.47
SCNN1A-203ENST00000360168 EIF4G1Q04637 1599 aaKnown RBP17.96■□□□□ 0.47
SCNN1A-203ENST00000360168 SMARCA2P51531 1590 aa17.96■□□□□ 0.47
SCNN1A-203ENST00000360168 EEA1Q15075 1411 aa17.86■□□□□ 0.45
SCNN1A-203ENST00000360168 BCANQ96GW7 911 aa17.86■□□□□ 0.45
SCNN1A-203ENST00000360168 SLC24A1O60721 1099 aa17.83■□□□□ 0.45
SCNN1A-203ENST00000360168 KANK4Q5T7N3 995 aaPredicted RBP17.81■□□□□ 0.44
SCNN1A-203ENST00000360168 RAPGEF2Q9Y4G8 1499 aa17.81■□□□□ 0.44
SCNN1A-203ENST00000360168 CEP164Q9UPV0 1460 aa17.81■□□□□ 0.44
SCNN1A-203ENST00000360168 ATAD2BQ9ULI0 1458 aa17.8■□□□□ 0.44
SCNN1A-203ENST00000360168 ATP1B4Q9UN42 357 aaPredicted RBP17.78■□□□□ 0.44
SCNN1A-203ENST00000360168 VPS8Q8N3P4 1428 aa17.78■□□□□ 0.44
SCNN1A-203ENST00000360168 KCNH8Q96L42 1107 aa17.77■□□□□ 0.43
SCNN1A-203ENST00000360168 BAZ1BQ9UIG0 1483 aaKnown RBP17.75■□□□□ 0.43
SCNN1A-203ENST00000360168 SUPT16HQ9Y5B9 1047 aaKnown RBP17.75■□□□□ 0.43
SCNN1A-203ENST00000360168 SYNJ1O43426 1573 aa17.72■□□□□ 0.43
SCNN1A-203ENST00000360168 HIRIP3Q9BW71 556 aaPredicted RBP17.71■□□□□ 0.43
SCNN1A-203ENST00000360168 PEG3Q9GZU2 1588 aa17.68■□□□□ 0.42
SCNN1A-203ENST00000360168 BCL11AQ9H165 835 aa17.67■□□□□ 0.42
SCNN1A-203ENST00000360168 DHX57Q6P158 1386 aaKnown RBP17.67■□□□□ 0.42
SCNN1A-203ENST00000360168 PRKCSHP14314 528 aaPredicted RBP17.63■□□□□ 0.41
SCNN1A-203ENST00000360168 DDX10Q13206 875 aaKnown RBP17.63■□□□□ 0.41
SCNN1A-203ENST00000360168 P3H3Q8IVL6 736 aa17.63■□□□□ 0.41
SCNN1A-203ENST00000360168 FAM50AQ14320 339 aaKnown RBP17.62■□□□□ 0.41
SCNN1A-203ENST00000360168 KIF21BO75037 1637 aa17.61■□□□□ 0.41
SCNN1A-203ENST00000360168 SIN3AQ96ST3 1273 aa17.57■□□□□ 0.4
SCNN1A-203ENST00000360168 FKBP8Q14318 412 aa17.56■□□□□ 0.4
SCNN1A-203ENST00000360168 NCAPD3P42695 1498 aa17.56■□□□□ 0.4
SCNN1A-203ENST00000360168 TRIM52Q96A61 297 aa17.54■□□□□ 0.4
SCNN1A-203ENST00000360168 TSHZ2Q9NRE2 1034 aa17.54■□□□□ 0.4
SCNN1A-203ENST00000360168 CCNB3Q8WWL7 1395 aa17.47■□□□□ 0.39
SCNN1A-203ENST00000360168 ARAP1Q96P48 1450 aa17.47■□□□□ 0.39
SCNN1A-203ENST00000360168 HMGXB3Q12766 1538 aa17.44■□□□□ 0.38
SCNN1A-203ENST00000360168 CLSPNQ9HAW4 1339 aa17.43■□□□□ 0.38
SCNN1A-203ENST00000360168 NEFLP07196 543 aa17.43■□□□□ 0.38
SCNN1A-203ENST00000360168 RAB3GAP2Q9H2M9 1393 aa17.43■□□□□ 0.38
SCNN1A-203ENST00000360168 CC2D2AQ9P2K1 1620 aa17.42■□□□□ 0.38
SCNN1A-203ENST00000360168 IRX6P78412 446 aaPredicted RBP17.38■□□□□ 0.37
SCNN1A-203ENST00000360168 CNGB1Q14028 1251 aaPredicted RBP17.34■□□□□ 0.37
SCNN1A-203ENST00000360168 KIF27Q86VH2 1401 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 199.8 ms