Protein–RNA interactions for Protein: P06753

TPM3, Tropomyosin alpha-3 chain, humanhuman

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P06753 AC010969.1-201ENST00000340444 2412 ntTSL 2 BASIC14.97□□□□□ -0.01
TPM3P06753 GRM4-202ENST00000374181 7275 ntTSL 5 BASIC14.97□□□□□ -0.01
TPM3P06753 SLC5A10-201ENST00000317977 4436 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TPM3P06753 AL022238.4-201ENST00000639722 4563 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
TPM3P06753 ZNF140-202ENST00000355557 3550 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TPM3P06753 BCDIN3D-AS1-201ENST00000548872 3078 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TPM3P06753 GRIK1-206ENST00000399913 3234 ntTSL 2 BASIC14.97□□□□□ -0.01
TPM3P06753 AP002008.2-201ENST00000635926 4870 ntBASIC14.97□□□□□ -0.01
TPM3P06753 REXO5-201ENST00000261377 2722 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TPM3P06753 FERMT2-201ENST00000341590 3338 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
TPM3P06753 TESPA1-202ENST00000449076 2010 ntAPPRIS P3 TSL 2 BASIC14.97□□□□□ -0.01
TPM3P06753 DDX11L2-201ENST00000437401 1398 ntBASIC14.97□□□□□ -0.01
TPM3P06753 AC090515.2-201ENST00000500929 1396 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TPM3P06753 CHCHD7-201ENST00000303759 1684 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
TPM3P06753 AC007598.3-201ENST00000623077 1678 ntBASIC14.97□□□□□ -0.01
TPM3P06753 EDRF1-201ENST00000337623 4387 ntAPPRIS P3 TSL 5 BASIC14.96□□□□□ -0.01
TPM3P06753 NR1D1-201ENST00000246672 2772 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TPM3P06753 CELF4-217ENST00000591282 1461 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
TPM3P06753 SLCO6A1-207ENST00000513675 1611 ntTSL 2 BASIC14.96□□□□□ -0.01
TPM3P06753 IP6K2-201ENST00000328631 1775 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TPM3P06753 RTFDC1-202ENST00000357348 2212 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TPM3P06753 DAXX-203ENST00000414083 2355 ntTSL 2 BASIC14.96□□□□□ -0.01
TPM3P06753 KCNH1-202ENST00000367007 3445 ntTSL 5 BASIC14.96□□□□□ -0.01
TPM3P06753 KCNC2-201ENST00000298972 3563 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
TPM3P06753 RIOK3-201ENST00000339486 4038 ntAPPRIS P2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TPM3P06753 RIPK4-202ENST00000352483 4016 ntTSL 5 BASIC14.96□□□□□ -0.01
TPM3P06753 RUBCN-202ENST00000296343 2919 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
TPM3P06753 COX14-201ENST00000317943 708 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
TPM3P06753 KRT17P5-201ENST00000332088 839 ntBASIC14.96□□□□□ -0.01
TPM3P06753 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
TPM3P06753 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TPM3P06753 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC14.96□□□□□ -0.01
TPM3P06753 TMEM136-202ENST00000375095 4143 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
TPM3P06753 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TPM3P06753 MXI1-205ENST00000393134 889 ntTSL 2 BASIC14.96□□□□□ -0.01
TPM3P06753 SYBU-203ENST00000408889 2776 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
TPM3P06753 RBM4-205ENST00000409406 2321 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
TPM3P06753 FAM21FP-201ENST00000426241 1131 ntBASIC14.96□□□□□ -0.01
TPM3P06753 ITGAL-203ENST00000433423 1416 ntTSL 2 BASIC14.96□□□□□ -0.01
TPM3P06753 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TPM3P06753 AC005077.3-201ENST00000449614 213 ntBASIC14.96□□□□□ -0.01
TPM3P06753 AL451069.3-201ENST00000450206 1013 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
TPM3P06753 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC14.96□□□□□ -0.01
TPM3P06753 AC005740.2-201ENST00000511085 419 ntBASIC14.96□□□□□ -0.01
TPM3P06753 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
TPM3P06753 AC015689.1-201ENST00000525365 462 ntTSL 2 BASIC14.96□□□□□ -0.01
TPM3P06753 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC14.96□□□□□ -0.01
TPM3P06753 KRT17P8-201ENST00000540749 863 ntBASIC14.96□□□□□ -0.01
TPM3P06753 AC013355.1-201ENST00000562625 723 ntBASIC14.96□□□□□ -0.01
TPM3P06753 SNHG25-202ENST00000582965 278 ntTSL 2 BASIC14.96□□□□□ -0.01
TPM3P06753 ZNF347-208ENST00000601804 496 ntTSL 4 BASIC14.96□□□□□ -0.01
TPM3P06753 ATP6V0D1-218ENST00000602876 1554 ntTSL 5 BASIC14.96□□□□□ -0.01
TPM3P06753 CECR7-204ENST00000609932 568 ntTSL 2 BASIC14.96□□□□□ -0.01
TPM3P06753 AL096828.3-201ENST00000615354 462 ntBASIC14.96□□□□□ -0.01
TPM3P06753 MCM3AP-201ENST00000291688 6193 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TPM3P06753 EIF5-205ENST00000558506 4384 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TPM3P06753 CLDN19-201ENST00000296387 2859 ntTSL 2 BASIC14.96□□□□□ -0.01
TPM3P06753 KCNA1-201ENST00000382545 7997 ntAPPRIS P1 TSL 4 BASIC14.96□□□□□ -0.01
TPM3P06753 CDK5RAP3-202ENST00000536708 1975 ntTSL 2 BASIC14.96□□□□□ -0.01
TPM3P06753 TMEM86A-201ENST00000280734 3595 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
TPM3P06753 C17orf80-202ENST00000268942 3449 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
TPM3P06753 THSD1-201ENST00000258613 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TPM3P06753 UBE2A-206ENST00000625938 1381 ntTSL 2 BASIC14.96□□□□□ -0.02
TPM3P06753 PCDHGA4-202ENST00000612927 2691 ntAPPRIS ALT2 BASIC14.96□□□□□ -0.02
TPM3P06753 INPP5D-204ENST00000445964 4845 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
TPM3P06753 FLNA-202ENST00000360319 8281 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.02
TPM3P06753 IL1RAP-211ENST00000439062 2244 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.02
TPM3P06753 COL22A1-203ENST00000435777 4355 ntAPPRIS ALT2 TSL 2 BASIC14.96□□□□□ -0.02
TPM3P06753 ATXN2-226ENST00000608853 4376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.02
TPM3P06753 MKL1-213ENST00000620651 3757 ntTSL 5 BASIC14.96□□□□□ -0.02
TPM3P06753 AC015909.3-201ENST00000572855 1794 ntBASIC14.96□□□□□ -0.02
TPM3P06753 SMIM5-202ENST00000537494 4344 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.02
TPM3P06753 BDH1-201ENST00000358186 3330 ntAPPRIS P1 TSL 5 BASIC14.95□□□□□ -0.02
TPM3P06753 CCT7P1-201ENST00000406551 1611 ntBASIC14.95□□□□□ -0.02
TPM3P06753 DDC-206ENST00000431062 1620 ntTSL 5 BASIC14.95□□□□□ -0.02
TPM3P06753 SP7-202ENST00000536324 3151 ntAPPRIS P1 TSL 2 BASIC14.95□□□□□ -0.02
TPM3P06753 FBLN1-203ENST00000340923 2348 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TPM3P06753 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TPM3P06753 STIM1-209ENST00000527651 2184 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TPM3P06753 RNF213-201ENST00000319921 5316 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TPM3P06753 PCDHGB2-201ENST00000522605 4602 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TPM3P06753 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC14.95□□□□□ -0.02
TPM3P06753 CEP170-204ENST00000366544 6805 ntTSL 5 BASIC14.95□□□□□ -0.02
TPM3P06753 RAP1A-202ENST00000369709 5024 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TPM3P06753 LINC02202-201ENST00000499583 2664 ntTSL 2 BASIC14.95□□□□□ -0.02
TPM3P06753 CST9-201ENST00000376971 1592 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TPM3P06753 BDNF-202ENST00000356660 4018 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TPM3P06753 ADCK1-202ENST00000341211 1972 ntTSL 2 BASIC14.95□□□□□ -0.02
TPM3P06753 TNKS-213ENST00000522110 2900 ntBASIC14.95□□□□□ -0.02
TPM3P06753 KLF8-202ENST00000374928 4821 ntTSL 2 BASIC14.95□□□□□ -0.02
TPM3P06753 HOTTIP-203ENST00000521028 3345 ntTSL 5 BASIC14.95□□□□□ -0.02
TPM3P06753 AC007614.5-201ENST00000623424 8892 ntBASIC14.95□□□□□ -0.02
TPM3P06753 CUL4A-204ENST00000451881 3724 ntTSL 5 BASIC14.95□□□□□ -0.02
TPM3P06753 AIMP2-201ENST00000223029 1225 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TPM3P06753 ERCC1-203ENST00000340192 949 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TPM3P06753 HIST3H3-201ENST00000366696 481 ntAPPRIS P1 BASIC14.95□□□□□ -0.02
TPM3P06753 DPM3-202ENST00000368399 517 ntBASIC14.95□□□□□ -0.02
TPM3P06753 NPPA-201ENST00000376476 728 ntTSL 3 BASIC14.95□□□□□ -0.02
TPM3P06753 PSME1-202ENST00000382708 1136 ntTSL 2 BASIC14.95□□□□□ -0.02
TPM3P06753 NME4-203ENST00000397722 1232 ntTSL 2 BASIC14.95□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms