Protein–RNA interactions for Protein: Q9BSH3

NICN1, Nicolin-1, humanhuman

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NICN1Q9BSH3 ZNF236-202ENST00000320610 7124 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
NICN1Q9BSH3 DGKZP1-201ENST00000378718 2776 ntBASIC11.49□□□□□ -0.57
NICN1Q9BSH3 SMG7-214ENST00000508461 3985 ntAPPRIS ALT2 TSL 2 BASIC11.49□□□□□ -0.57
NICN1Q9BSH3 CBL-201ENST00000264033 11231 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
NICN1Q9BSH3 HNRNPMP1-201ENST00000560685 1768 ntBASIC11.49□□□□□ -0.57
NICN1Q9BSH3 CDK16-201ENST00000276052 3016 ntTSL 2 BASIC11.49□□□□□ -0.57
NICN1Q9BSH3 BBOF1-201ENST00000394009 3106 ntAPPRIS P2 TSL 2 BASIC11.49□□□□□ -0.57
NICN1Q9BSH3 C12orf74-201ENST00000397833 1856 ntAPPRIS P3 TSL 1 (best) BASIC11.49□□□□□ -0.57
NICN1Q9BSH3 LDLR-207ENST00000558013 3144 ntAPPRIS ALT2 TSL 1 (best) BASIC11.49□□□□□ -0.57
NICN1Q9BSH3 WDR62-203ENST00000401500 4682 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 PPARG-206ENST00000397012 2006 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 DNM1P41-201ENST00000623634 3350 ntBASIC11.48□□□□□ -0.57
NICN1Q9BSH3 INPP5J-208ENST00000412277 3512 ntTSL 2 BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 FAM105A-201ENST00000274217 3597 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 KCNH1-209ENST00000639952 8075 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 ARHGEF9-205ENST00000437457 3758 ntTSL 5 BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 LINC00664-203ENST00000599078 3760 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 EME1-202ENST00000393271 2354 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 POM121L7P-201ENST00000329949 2404 ntBASIC11.48□□□□□ -0.57
NICN1Q9BSH3 AL354861.3-201ENST00000600140 2412 ntBASIC11.48□□□□□ -0.57
NICN1Q9BSH3 LRRC57-201ENST00000323443 7351 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 KCNAB1-215ENST00000618897 4437 ntTSL 5 BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 SPIN3-201ENST00000374919 4642 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 KIF9-207ENST00000444589 2791 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 DCAF6-203ENST00000367843 3302 ntAPPRIS P3 TSL 5 BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 EPB41L2-204ENST00000392427 3369 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 SCN8A-215ENST00000638820 3359 ntTSL 5 BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 HERC6-202ENST00000273960 3473 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 HOXB13-201ENST00000290295 3467 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 TRIM37-202ENST00000393065 3548 ntTSL 2 BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 IFT122-204ENST00000349441 3569 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 EPB41L2-205ENST00000445890 3677 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 COL19A1-205ENST00000620364 6233 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 LGALS2-201ENST00000215886 591 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 BLVRB-201ENST00000263368 873 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 HMGN3-201ENST00000275036 831 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 C2orf70-201ENST00000329615 731 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 HMGN3-202ENST00000344726 872 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 SAT1-201ENST00000379251 801 ntTSL 2 BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 SAT1-202ENST00000379253 909 ntTSL 2 BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 SAT1-203ENST00000379254 868 ntTSL 3 BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 AC005034.1-201ENST00000426657 489 ntBASIC11.48□□□□□ -0.57
NICN1Q9BSH3 AP1B1P1-201ENST00000432373 827 ntTSL 3 BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 AC092573.1-201ENST00000433054 884 ntBASIC11.48□□□□□ -0.57
NICN1Q9BSH3 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 CCDC18-AS1-219ENST00000451302 1212 ntTSL 3 BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 PMP22-206ENST00000494511 872 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 IGHV3-71-201ENST00000523324 359 ntBASIC11.48□□□□□ -0.57
NICN1Q9BSH3 RPL27A-202ENST00000524496 558 ntTSL 3 BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 PIGCP1-201ENST00000527583 895 ntBASIC11.48□□□□□ -0.57
NICN1Q9BSH3 NAA40-205ENST00000539656 577 ntTSL 4 BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 MBP-238ENST00000580402 915 ntTSL 5 BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 TXNL4A-212ENST00000592957 546 ntTSL 3 BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 AC012087.1-201ENST00000608068 809 ntTSL 5 BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 MIR6769A-201ENST00000617340 73 ntBASIC11.48□□□□□ -0.57
NICN1Q9BSH3 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 AC079325.2-201ENST00000641710 606 ntAPPRIS P5 BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 KCNQ3-201ENST00000388996 11510 ntAPPRIS P3 TSL 1 (best) BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 RNF170-206ENST00000527424 3880 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 LENG8-201ENST00000326764 3991 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 PAX8-205ENST00000429538 4084 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 FAM168A-204ENST00000450446 1364 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 LINC02405-201ENST00000512624 1361 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 IL1R2-202ENST00000393414 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 C19orf12-208ENST00000614091 4489 ntAPPRIS P1 TSL 4 BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 ADAMTS9-210ENST00000498707 7624 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 PPHLN1-223ENST00000610488 1521 ntTSL 5 BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 NFE2L1-203ENST00000362042 4774 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 ERP44-201ENST00000262455 4854 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 SRSF5-201ENST00000394366 1638 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 CASP8-212ENST00000432109 1629 ntAPPRIS P4 TSL 5 BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 SH2D2A-203ENST00000392306 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 PLA1A-206ENST00000495992 1695 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 SOX30-203ENST00000519442 1666 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 GOLGA8N-205ENST00000569659 1791 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 LILRA6-203ENST00000396365 1890 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 AP000229.1-201ENST00000608591 1979 ntTSL 4 BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 EPB41L1-212ENST00000441639 5967 ntTSL 5 BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 PTCD2-212ENST00000543322 2029 ntTSL 2 BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 GIMAP1-GIMAP5-201ENST00000611999 2148 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 TPO-204ENST00000382198 2283 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 RBM39-243ENST00000528062 2421 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 NRF1-202ENST00000311967 2481 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 ACOXL-202ENST00000389811 2714 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 MCU-204ENST00000536019 3224 ntTSL 2 BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 BMP2-201ENST00000378827 3601 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 GRIP2-206ENST00000637182 3727 ntAPPRIS ALT2 TSL 5 BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 GEMIN5-201ENST00000285873 5397 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 TBL1X-206ENST00000424279 5451 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 NPLOC4-202ENST00000374747 5538 ntTSL 2 BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 DAG1-218ENST00000515359 5576 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
NICN1Q9BSH3 STX16-202ENST00000355957 4897 ntTSL 2 BASIC11.47□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms