Protein–RNA interactions for Protein: O60481

ZIC3, Zinc finger protein ZIC 3, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZIC3O60481 TSN-212ENST00000536142 3328 ntTSL 2 BASIC11.94□□□□□ -0.5
ZIC3O60481 KLHL13-209ENST00000545703 3322 ntAPPRIS ALT1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ZIC3O60481 TGFBR3-201ENST00000212355 6465 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
ZIC3O60481 ELK4-202ENST00000357992 10239 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ZIC3O60481 CA2-201ENST00000285379 1717 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ZIC3O60481 TCAF2-205ENST00000444908 2976 ntTSL 5 BASIC11.94□□□□□ -0.5
ZIC3O60481 CPT1B-202ENST00000360719 2319 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
ZIC3O60481 NCSTN-201ENST00000294785 2936 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ZIC3O60481 ICOSLG-202ENST00000400377 2907 ntTSL 2 BASIC11.94□□□□□ -0.5
ZIC3O60481 MAP3K12-203ENST00000547035 2944 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
ZIC3O60481 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ZIC3O60481 MED7-202ENST00000420343 1382 ntAPPRIS P1 TSL 2 BASIC11.94□□□□□ -0.5
ZIC3O60481 HNRNPC-205ENST00000553300 1375 ntAPPRIS P2 TSL 1 (best) BASIC11.94□□□□□ -0.5
ZIC3O60481 IFT172-203ENST00000416524 1982 ntTSL 2 BASIC11.94□□□□□ -0.5
ZIC3O60481 C8orf49-201ENST00000525043 1968 ntBASIC11.94□□□□□ -0.5
ZIC3O60481 CAMKK2-209ENST00000446440 2587 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
ZIC3O60481 MKL1-213ENST00000620651 3757 ntTSL 5 BASIC11.94□□□□□ -0.5
ZIC3O60481 GEM-201ENST00000297596 2208 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ZIC3O60481 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ZIC3O60481 NECAP2-202ENST00000443980 1929 ntTSL 2 BASIC11.94□□□□□ -0.5
ZIC3O60481 SRSF5-201ENST00000394366 1638 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ZIC3O60481 AC006144.1-201ENST00000424220 1600 ntBASIC11.94□□□□□ -0.5
ZIC3O60481 USP36-202ENST00000449938 1647 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
ZIC3O60481 AC007491.1-201ENST00000637560 1306 ntTSL 5 BASIC11.94□□□□□ -0.5
ZIC3O60481 ZNF395-201ENST00000344423 4808 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ZIC3O60481 SCNN1A-215ENST00000540037 3040 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ZIC3O60481 PPARA-202ENST00000402126 1558 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ZIC3O60481 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ZIC3O60481 BCL2L11-203ENST00000357757 947 ntTSL 5 BASIC11.94□□□□□ -0.5
ZIC3O60481 RPLP1-202ENST00000357790 445 ntTSL 2 BASIC11.94□□□□□ -0.5
ZIC3O60481 GLRX2-202ENST00000367440 1131 ntAPPRIS P4 TSL 1 (best) BASIC11.94□□□□□ -0.5
ZIC3O60481 HDGF-202ENST00000368206 960 ntTSL 5 BASIC11.94□□□□□ -0.5
ZIC3O60481 CELA3A-202ENST00000374663 649 ntTSL 2 BASIC11.94□□□□□ -0.5
ZIC3O60481 RN7SKP102-201ENST00000411186 315 ntBASIC11.94□□□□□ -0.5
ZIC3O60481 GAPDHP29-201ENST00000429913 985 ntBASIC11.94□□□□□ -0.5
ZIC3O60481 AC099524.1-203ENST00000565272 756 ntTSL 5 BASIC11.94□□□□□ -0.5
ZIC3O60481 AC093567.1-201ENST00000590649 877 ntTSL 3 BASIC11.94□□□□□ -0.5
ZIC3O60481 AQP7-213ENST00000624075 1270 ntTSL 2 BASIC11.94□□□□□ -0.5
ZIC3O60481 PLS3-210ENST00000626746 216 ntTSL 4 BASIC11.94□□□□□ -0.5
ZIC3O60481 AIFM1P1-201ENST00000413342 1841 ntBASIC11.94□□□□□ -0.5
ZIC3O60481 HACD3-210ENST00000568793 1824 ntTSL 5 BASIC11.94□□□□□ -0.5
ZIC3O60481 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ZIC3O60481 F10-201ENST00000375551 1509 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ZIC3O60481 HTD2-205ENST00000477305 1531 ntAPPRIS P1 TSL 5 BASIC11.94□□□□□ -0.5
ZIC3O60481 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ZIC3O60481 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
ZIC3O60481 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ZIC3O60481 COL4A3-202ENST00000396578 8097 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ZIC3O60481 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ZIC3O60481 APOB-202ENST00000399256 3128 ntTSL 1 (best) BASIC11.94□□□□□ -0.5
ZIC3O60481 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC11.94□□□□□ -0.5
ZIC3O60481 KY-202ENST00000503669 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.5
ZIC3O60481 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ZIC3O60481 WDR33-201ENST00000322313 9471 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ZIC3O60481 RAPH1-213ENST00000630330 4134 ntAPPRIS ALT2 TSL 5 BASIC11.94□□□□□ -0.5
ZIC3O60481 SMC6-201ENST00000351948 5173 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ZIC3O60481 EFR3B-202ENST00000401432 5162 ntTSL 2 BASIC11.94□□□□□ -0.5
ZIC3O60481 KLC4-203ENST00000394056 2770 ntAPPRIS ALT2 TSL 2 BASIC11.94□□□□□ -0.5
ZIC3O60481 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ZIC3O60481 RGS22-201ENST00000360863 4296 ntAPPRIS P3 TSL 1 (best) BASIC11.94□□□□□ -0.5
ZIC3O60481 GOSR2-209ENST00000575949 1444 ntTSL 2 BASIC11.94□□□□□ -0.5
ZIC3O60481 TRIM21-201ENST00000254436 1924 ntAPPRIS P1 TSL 1 (best) BASIC11.94□□□□□ -0.5
ZIC3O60481 HSPA8P9-201ENST00000485881 1943 ntBASIC11.94□□□□□ -0.5
ZIC3O60481 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC11.93□□□□□ -0.5
ZIC3O60481 HNF1A-201ENST00000257555 3442 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ZIC3O60481 CAPRIN1-212ENST00000532820 3438 ntAPPRIS P4 TSL 1 (best) BASIC11.93□□□□□ -0.5
ZIC3O60481 NXPE3-201ENST00000273347 3941 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ZIC3O60481 GFAP-201ENST00000253408 3135 ntTSL 5 BASIC11.93□□□□□ -0.5
ZIC3O60481 TIPARP-201ENST00000295924 4109 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ZIC3O60481 IL18BP-202ENST00000337131 1606 ntAPPRIS P2 TSL 5 BASIC11.93□□□□□ -0.5
ZIC3O60481 ADAM15-202ENST00000355956 2877 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
ZIC3O60481 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ZIC3O60481 ZSCAN5C-202ENST00000534327 1892 ntAPPRIS P1 TSL 5 BASIC11.93□□□□□ -0.5
ZIC3O60481 DNMT3B-202ENST00000328111 4336 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ZIC3O60481 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
ZIC3O60481 B3GAT1-203ENST00000524765 5737 ntAPPRIS P1 TSL 2 BASIC11.93□□□□□ -0.5
ZIC3O60481 AC004147.4-201ENST00000636421 1844 ntTSL 5 BASIC11.93□□□□□ -0.5
ZIC3O60481 MYO1G-201ENST00000258787 3267 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ZIC3O60481 SAFB-211ENST00000592224 3014 ntAPPRIS ALT2 TSL 1 (best) BASIC11.93□□□□□ -0.5
ZIC3O60481 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ZIC3O60481 AFG3L2P1-201ENST00000521792 1763 ntBASIC11.93□□□□□ -0.5
ZIC3O60481 DNM1L-220ENST00000549701 2487 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
ZIC3O60481 OS9-218ENST00000551035 2246 ntTSL 2 BASIC11.93□□□□□ -0.5
ZIC3O60481 GAS6-AS2-201ENST00000608651 1952 ntTSL 2 BASIC11.93□□□□□ -0.5
ZIC3O60481 PMM1-201ENST00000216259 1298 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ZIC3O60481 TIMP1-201ENST00000218388 892 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ZIC3O60481 ZNF226-201ENST00000300823 817 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
ZIC3O60481 MT1F-201ENST00000334350 690 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.5
ZIC3O60481 IFNLR1-204ENST00000374419 953 ntTSL 5 BASIC11.93□□□□□ -0.5
ZIC3O60481 TIMP1-202ENST00000377017 626 ntTSL 2 BASIC11.93□□□□□ -0.5
ZIC3O60481 MIR632-201ENST00000385193 94 ntBASIC11.93□□□□□ -0.5
ZIC3O60481 TMEM95-202ENST00000389982 1191 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
ZIC3O60481 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC11.93□□□□□ -0.5
ZIC3O60481 AP005273.1-201ENST00000444862 522 ntTSL 3 BASIC11.93□□□□□ -0.5
ZIC3O60481 TMEM222-203ENST00000464813 1071 ntTSL 2 BASIC11.93□□□□□ -0.5
ZIC3O60481 AC137579.2-201ENST00000517714 551 ntTSL 4 BASIC11.93□□□□□ -0.5
ZIC3O60481 ABHD17AP9-201ENST00000561925 548 ntBASIC11.93□□□□□ -0.5
ZIC3O60481 AC048382.6-201ENST00000621980 1223 ntBASIC11.93□□□□□ -0.5
ZIC3O60481 LINC00969-257ENST00000625632 898 ntTSL 5 BASIC11.93□□□□□ -0.5
ZIC3O60481 MME-218ENST00000625667 363 ntTSL 5 BASIC11.93□□□□□ -0.5
Retrieved 100 of 98,524 protein–RNA pairs in 41.1 ms